FFCP PHASE1:Hg19::chr20:44573083..44573116,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63935 | |EntrezGene=63935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16200 | |HGNC=16200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-390bp_to_uc002xqt.2_5end | |association_with_transcript=-390bp_to_uc002xqt.2_5end | ||
|cluster_id=chr20:44573083..44573116,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_PCIF1_5end | |description=CAGE_peak_3_at_PCIF1_5end | ||
|id=chr20:44573083..44573116,+ | |id=chr20:44573083..44573116,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.65e-71!42;CL:0000860!1.94e-65!45;CL:0002194!7.95e-46!63;CL:0000576!7.95e-46!63;CL:0000040!7.95e-46!63;CL:0000559!7.95e-46!63;CL:0002009!3.99e-44!65;CL:0000766!5.08e-41!76;CL:0000839!2.71e-40!70;CL:0000557!1.36e-39!71;CL:0000763!3.46e-26!112;CL:0000049!3.46e-26!112;CL:0002087!3.61e-24!119;CL:0002031!8.86e-23!124;CL:0000738!1.47e-21!140;CL:0002032!8.50e-18!165;CL:0000837!8.50e-18!165;CL:0000037!1.23e-16!172;CL:0000566!1.23e-16!172;CL:0000988!3.88e-15!182 | |ontology_enrichment_celltype=CL:0002057!7.65e-71!42;CL:0000860!1.94e-65!45;CL:0002194!7.95e-46!63;CL:0000576!7.95e-46!63;CL:0000040!7.95e-46!63;CL:0000559!7.95e-46!63;CL:0002009!3.99e-44!65;CL:0000766!5.08e-41!76;CL:0000839!2.71e-40!70;CL:0000557!1.36e-39!71;CL:0000763!3.46e-26!112;CL:0000049!3.46e-26!112;CL:0002087!3.61e-24!119;CL:0002031!8.86e-23!124;CL:0000738!1.47e-21!140;CL:0002032!8.50e-18!165;CL:0000837!8.50e-18!165;CL:0000037!1.23e-16!172;CL:0000566!1.23e-16!172;CL:0000988!3.88e-15!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-108;33!CL:0002057;1.45e-108;33!CL:0000473;2.30e-73;39!CL:0000234;2.30e-73;39!CL:0000576;3.37e-56;48!CL:0000766;9.96e-26;69!CL:0002087;8.66e-17;104!CL:0000763;1.29e-15;100!CL:0000738;1.92e-11;136!CL:0000319;6.46e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.29e-101,42;CL:0002057,1.29e-101,42;CL:0000473,1.81e-88,48;CL:0000234,1.81e-88,48;CL:0002194,4.71e-70,59;CL:0000576,4.71e-70,59;CL:0000040,4.71e-70,59;CL:0000559,4.71e-70,59;CL:0002009,1.12e-67,61;CL:0000839,2.36e-62,66;CL:0000557,2.20e-61,67;CL:0000766,6.29e-57,72;CL:0002087,1.29e-37,115;CL:0000763,6.82e-37,108;CL:0000049,6.82e-37,108;CL:0002031,6.64e-36,120;CL:0000738,2.91e-31,136;CL:0002032,7.73e-26,161;CL:0000837,7.73e-26,161;CL:0000037,1.32e-24,168;CL:0000988,3.66e-23,177;CL:0000134,1.42e-09,354;CL:0002320,2.63e-09,361;CL:0000319,6.22e-09,1;CL:0000219,2.30e-08,386;CL:0000048,3.30e-07,427;CL:0000723,4.77e-07,433;CL:0000034,7.68e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-71;42!CL:0000049;1.81e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.22e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.64e-34!80;UBERON:0001474!5.17e-31!86;UBERON:0002405!3.21e-28!115;UBERON:0004765!1.20e-26!101;UBERON:0001434!1.20e-26!101;UBERON:0002390!2.44e-26!102;UBERON:0003061!2.44e-26!102;UBERON:0002193!1.49e-24!112;UBERON:0002204!2.46e-12!167;UBERON:0003081!1.46e-07!216;UBERON:0000062!3.97e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!4.64e-34!80;UBERON:0001474!5.17e-31!86;UBERON:0002405!3.21e-28!115;UBERON:0004765!1.20e-26!101;UBERON:0001434!1.20e-26!101;UBERON:0002390!2.44e-26!102;UBERON:0003061!2.44e-26!102;UBERON:0002193!1.49e-24!112;UBERON:0002204!2.46e-12!167;UBERON:0003081!1.46e-07!216;UBERON:0000062!3.97e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.86e-54,76;UBERON:0001474,1.27e-49,82;UBERON:0004765,6.20e-45,90;UBERON:0002405,2.22e-43,93;UBERON:0002390,5.33e-41,98;UBERON:0003061,5.33e-41,98;UBERON:0001434,4.10e-40,100;UBERON:0002193,6.82e-37,108;UBERON:0002204,1.39e-22,167;UBERON:0003081,6.67e-18,203;UBERON:0000926,4.08e-10,315;UBERON:0004120,4.08e-10,315;UBERON:0006603,4.08e-10,315;UBERON:0002384,6.09e-09,371 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,0.434021741431704,0,0,0,3.34415949192999,0,1.94067248950253,6.0431549595478,0.822335776043652,5.57471467611186,2.01384674625505,0.512321413058201,1.89185783910868,9.65287906062532,2.5819387343353,5.41705946377367,7.71793592124679,1.09162460023138,4.49446968890169,7.95818120164347,1.28371610830437,7.67204550958849,0.989553900560148,0,0.426224750532694,7.2552309657146,3.40431134814684,6.85104473895132,5.7787193009051,0.521482918420201,5.64690996233303,1.21079900526674,5.15588690382591,5.69632297393592,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14245036494787,0,0,0,0,0,0,0,0,0.716084698702437,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0,0,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0.472775363535873,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@PCIF1 | |short_description=p3@PCIF1 | ||
}} | }} |
Latest revision as of 13:22, 16 September 2015
Short description: | p3@PCIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCIF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -390bp_to_uc002xqt.2_5end |
EntrezGene: | PCIF1 |
HGNC: | 16200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.29e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.29e-101 | 42 |
defensive cell | 1.81e-88 | 48 |
phagocyte | 1.81e-88 | 48 |
monopoietic cell | 4.71e-70 | 59 |
monocyte | 4.71e-70 | 59 |
monoblast | 4.71e-70 | 59 |
promonocyte | 4.71e-70 | 59 |
macrophage dendritic cell progenitor | 1.12e-67 | 61 |
myeloid lineage restricted progenitor cell | 2.36e-62 | 66 |
granulocyte monocyte progenitor cell | 2.20e-61 | 67 |
myeloid leukocyte | 6.29e-57 | 72 |
nongranular leukocyte | 1.29e-37 | 115 |
myeloid cell | 6.82e-37 | 108 |
common myeloid progenitor | 6.82e-37 | 108 |
hematopoietic lineage restricted progenitor cell | 6.64e-36 | 120 |
leukocyte | 2.91e-31 | 136 |
hematopoietic oligopotent progenitor cell | 7.73e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-26 | 161 |
hematopoietic stem cell | 1.32e-24 | 168 |
hematopoietic cell | 3.66e-23 | 177 |
mesenchymal cell | 1.42e-09 | 354 |
connective tissue cell | 2.63e-09 | 361 |
mucus secreting cell | 6.22e-09 | 1 |
motile cell | 2.30e-08 | 386 |
multi fate stem cell | 3.30e-07 | 427 |
somatic stem cell | 4.77e-07 | 433 |
stem cell | 7.68e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.86e-54 | 76 |
bone element | 1.27e-49 | 82 |
skeletal element | 6.20e-45 | 90 |
immune system | 2.22e-43 | 93 |
hematopoietic system | 5.33e-41 | 98 |
blood island | 5.33e-41 | 98 |
skeletal system | 4.10e-40 | 100 |
hemolymphoid system | 6.82e-37 | 108 |
musculoskeletal system | 1.39e-22 | 167 |
lateral plate mesoderm | 6.67e-18 | 203 |
mesoderm | 4.08e-10 | 315 |
mesoderm-derived structure | 4.08e-10 | 315 |
presumptive mesoderm | 4.08e-10 | 315 |
connective tissue | 6.09e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.22e-09 | 1 |