FFCP PHASE1:Hg19::chr13:111465064..111465074,-: Difference between revisions
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|id=chr13:111465064..111465074,-
|short_description=p1@LOC283486
|description=CAGE_peak_1_at_LOC283486_5end
|association_with_transcript=356bp_to_BC035264_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283486 | |EntrezGene=283486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=356bp_to_BC035264_5end | |||
|cluster_id=chr13:111465064..111465074,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LOC283486_5end | |||
|id=chr13:111465064..111465074,- | |||
|ontology_enrichment_celltype=CL:0002557!1.41e-14!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001871!1.41e-15!7;UBERON:0002146!8.17e-15!1;UBERON:0005623!8.17e-15!1;UBERON:0002336!2.75e-14!1;UBERON:0001018!2.75e-14!1;UBERON:0002473!2.75e-14!1;UBERON:0005340!2.75e-14!1;UBERON:0002316!2.75e-14!1;UBERON:0003544!2.75e-14!1;UBERON:0001020!2.75e-14!1;UBERON:0005970!2.75e-14!1;UBERON:0002437!2.75e-14!1;UBERON:0002022!3.15e-14!1;UBERON:0001950!2.45e-10!20;UBERON:0003351!8.48e-10!6;UBERON:0002791!1.20e-09!33;UBERON:0002619!1.85e-09!22;UBERON:0001893!2.27e-09!34;UBERON:0003075!6.25e-09!86;UBERON:0007284!6.25e-09!86;UBERON:0002346!1.67e-08!90;UBERON:0000956!2.15e-08!25;UBERON:0000203!2.15e-08!25;UBERON:0007023!2.20e-08!115;UBERON:0001876!5.02e-08!2;UBERON:0007497!6.15e-08!2;UBERON:0003643!6.15e-08!2;UBERON:0003504!6.15e-08!2;UBERON:0003469!6.15e-08!2;UBERON:0003496!6.15e-08!2;UBERON:0004797!6.15e-08!2;UBERON:0002012!6.15e-08!2;UBERON:0008886!6.15e-08!2;UBERON:0007303!6.15e-08!2;UBERON:0002061!6.15e-08!2;UBERON:0005432!6.15e-08!2;UBERON:0004363!6.15e-08!2;UBERON:0002780!8.50e-08!41;UBERON:0001890!8.50e-08!41;UBERON:0006240!8.50e-08!41;UBERON:0005162!8.60e-08!2;UBERON:0000122!8.60e-08!2;UBERON:0000473!9.08e-08!8;UBERON:0003080!1.30e-07!42;UBERON:0003056!2.54e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p1@LOC283486 | |||
}} | }} |
Latest revision as of 13:29, 16 September 2015
Short description: | p1@LOC283486 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC283486_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 356bp_to_BC035264_5end |
EntrezGene: | LOC283486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |