FFCP PHASE1:Hg19::chr10:118187325..118187332,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:118187325..118187332,+ to FFCP PHASE1:Hg19::chr10:118187325..118187332,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=119548 | |EntrezGene=119548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23492 | |HGNC=23492 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RR3 | |UniProt=Q17RR3 | ||
|association_with_transcript=-46bp_to_ENST00000369230_5end | |||
|cluster_id=chr10:118187325..118187332,+ | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_5_at_PNLIPRP3_5end | |||
|id=chr10:118187325..118187332,+ | |||
|ontology_enrichment_celltype=CL:0002159!3.31e-51!13;CL:0000362!4.96e-33!8;CL:0002166!1.41e-32!3;CL:0002621!5.08e-32!3;CL:0000240!5.83e-28!6;CL:0000311!5.83e-28!6;CL:0000079!5.83e-28!6;CL:0000237!5.83e-28!6;CL:0000036!5.83e-28!6;CL:0000357!5.83e-28!6;CL:0000114!5.83e-28!6;CL:0002077!7.46e-25!33;CL:0002327!1.92e-24!4;CL:0000317!1.49e-22!2;CL:1000448!1.49e-22!2;CL:0002308!1.49e-22!2;CL:0002140!1.49e-22!2;CL:0000312!1.59e-19!5;CL:0000221!4.39e-13!71;CL:0002336!1.81e-11!1;CL:0002261!1.81e-11!1;CL:0002170!1.81e-11!1;CL:0000066!5.51e-11!254;CL:0000622!1.36e-09!5;CL:0000035!1.43e-08!20;CL:0002076!2.87e-08!43;CL:0002251!3.66e-08!21;CL:0000154!3.90e-08!6;CL:0000220!2.75e-07!246;CL:0002321!3.28e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000317;4.77e-57;2!CL:1000448;4.77e-57;2!CL:0002308;4.77e-57;2!CL:0002140;4.77e-57;2!CL:0002159;1.37e-50;14!CL:0002166;7.60e-39;3!CL:0002327;5.61e-29;4!CL:0000362;7.86e-29;9!CL:0000622;1.44e-23;5!CL:0000154;7.84e-20;6!CL:0002077;4.00e-19;34!CL:0000150;1.40e-13;9!CL:0000312;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,4.77e-57,2;CL:1000448,4.77e-57,2;CL:0002308,4.77e-57,2;CL:0002140,4.77e-57,2;CL:0002159,1.52e-50,14;CL:0002166,6.91e-39,3;CL:0002327,4.86e-29,4;CL:0000362,9.07e-29,9;CL:0000622,1.44e-23,5;CL:0002077,3.83e-21,34;CL:0000154,7.84e-20,6;CL:0000150,1.40e-13,9;CL:0000221,6.44e-10,72;CL:0000312,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!5.08e-32!3;UBERON:0001708!1.29e-24!4;UBERON:0001704!1.29e-24!4;UBERON:0001911!1.92e-24!4;UBERON:0005333!1.92e-24!4;UBERON:0008425!1.92e-24!4;UBERON:0005311!1.92e-24!4;UBERON:0002419!1.49e-22!2;UBERON:0007771!1.49e-22!2;UBERON:0003297!1.49e-22!2;UBERON:0001821!1.49e-22!2;UBERON:0003487!1.49e-22!2;UBERON:0001820!1.49e-22!2;UBERON:0005089!1.49e-22!2;UBERON:0005088!1.49e-22!2;UBERON:0001003!6.91e-19!14;UBERON:0007376!6.91e-19!14;UBERON:0007383!6.91e-19!14;UBERON:0002090!1.25e-16!6;UBERON:0000076!1.55e-12!8;UBERON:0001828!2.04e-12!8;UBERON:0003102!9.44e-12!95;UBERON:0003129!2.52e-09!11;UBERON:0000165!3.31e-09!28;UBERON:0000930!3.31e-09!28;UBERON:0005085!4.06e-09!29;UBERON:0002365!1.61e-08!31;UBERON:0002330!1.61e-08!31;UBERON:0004121!2.17e-08!169;UBERON:0000166!3.26e-08!21;UBERON:0000924!3.74e-08!173;UBERON:0006601!3.74e-08!173;UBERON:0000075!5.75e-08!13;UBERON:0005944!5.75e-08!13;UBERON:0004288!5.75e-08!13;UBERON:0003089!5.75e-08!13;UBERON:0000161!2.37e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.77e-57;2!UBERON:0007771;4.77e-57;2!UBERON:0003297;4.77e-57;2!UBERON:0001821;4.77e-57;2!UBERON:0003487;4.77e-57;2!UBERON:0001820;4.77e-57;2!UBERON:0001708;1.91e-29;4!UBERON:0008895;1.91e-29;4!UBERON:0001911;5.61e-29;4!UBERON:0011159;8.57e-24;5!UBERON:0001003;1.20e-17;15!UBERON:0007376;1.20e-17;15!UBERON:0002365;6.61e-15;31!UBERON:0002330;6.61e-15;31!UBERON:0011137;2.13e-11;11!UBERON:0010323;2.13e-11;11!UBERON:0010371;9.61e-09;31!UBERON:0000075;3.90e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.77e-57,2;UBERON:0007771,4.77e-57,2;UBERON:0003297,4.77e-57,2;UBERON:0001821,4.77e-57,2;UBERON:0003487,4.77e-57,2;UBERON:0001820,4.77e-57,2;UBERON:0005089,4.77e-57,2;UBERON:0005088,4.77e-57,2;UBERON:0001708,1.78e-29,4;UBERON:0008895,1.78e-29,4;UBERON:0001911,4.86e-29,4;UBERON:0005333,4.86e-29,4;UBERON:0008425,4.86e-29,4;UBERON:0005311,4.86e-29,4;UBERON:0011159,8.09e-24,5;UBERON:0010188,4.86e-20,6;UBERON:0002539,4.86e-20,6;UBERON:0008816,4.86e-20,6;UBERON:0001003,1.31e-17,15;UBERON:0007376,1.31e-17,15;UBERON:0007383,1.31e-17,15;UBERON:0000076,4.37e-15,8;UBERON:0002365,4.49e-15,31;UBERON:0005085,4.49e-15,31;UBERON:0002330,4.49e-15,31;UBERON:0010323,2.07e-11,11;UBERON:0011137,3.58e-09,14;UBERON:0002530,3.77e-08,59;UBERON:0000075,3.83e-08,16;UBERON:0003102,1.77e-07,99;UBERON:0008814,2.44e-07,18;UBERON:0010371,5.06e-07,104;UBERON:0002097,6.95e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,4.53551746136921,0.283550194484773,1.61205340865127,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,4.53551746136921,0.283550194484773,1.61205340865127,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@PNLIPRP3 | |||
}} | }} |
Latest revision as of 13:57, 16 September 2015
Short description: | p5@PNLIPRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PNLIPRP3_5end |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | -46bp_to_ENST00000369230_5end |
EntrezGene: | PNLIPRP3 |
HGNC: | 23492 |
UniProt: | Q17RR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 4.77e-57 | 2 |
epithelial cell of sweat gland | 4.77e-57 | 2 |
epithelial cell of skin gland | 4.77e-57 | 2 |
acinar cell of sebaceous gland | 4.77e-57 | 2 |
general ecto-epithelial cell | 1.52e-50 | 14 |
epithelial cell of Malassez | 6.91e-39 | 3 |
mammary gland epithelial cell | 4.86e-29 | 4 |
epidermal cell | 9.07e-29 | 9 |
acinar cell | 1.44e-23 | 5 |
ecto-epithelial cell | 3.83e-21 | 34 |
protein secreting cell | 7.84e-20 | 6 |
glandular epithelial cell | 1.40e-13 | 9 |
ectodermal cell | 6.44e-10 | 72 |
keratinocyte | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin gland | 4.77e-57 | 2 |
epidermis gland | 4.77e-57 | 2 |
gland of integumental system | 4.77e-57 | 2 |
sebaceous gland | 4.77e-57 | 2 |
skin sebaceous gland | 4.77e-57 | 2 |
sweat gland | 4.77e-57 | 2 |
sweat gland placode | 4.77e-57 | 2 |
sebaceous gland placode | 4.77e-57 | 2 |
jaw skeleton | 1.78e-29 | 4 |
splanchnocranium | 1.78e-29 | 4 |
mammary gland | 4.86e-29 | 4 |
mammary bud | 4.86e-29 | 4 |
mammary ridge | 4.86e-29 | 4 |
mammary placode | 4.86e-29 | 4 |
primary subdivision of cranial skeletal system | 8.09e-24 | 5 |
protuberance | 4.86e-20 | 6 |
pharyngeal arch | 4.86e-20 | 6 |
embryonic head | 4.86e-20 | 6 |
skin epidermis | 1.31e-17 | 15 |
outer epithelium | 1.31e-17 | 15 |
enveloping layer of ectoderm | 1.31e-17 | 15 |
external ectoderm | 4.37e-15 | 8 |
exocrine gland | 4.49e-15 | 31 |
ectodermal placode | 4.49e-15 | 31 |
exocrine system | 4.49e-15 | 31 |
cranial skeletal system | 2.07e-11 | 11 |
axial skeletal system | 3.58e-09 | 14 |
gland | 3.77e-08 | 59 |
subdivision of skeletal system | 3.83e-08 | 16 |
surface structure | 1.77e-07 | 99 |
pharyngeal arch system | 2.44e-07 | 18 |
ecto-epithelium | 5.06e-07 | 104 |
skin of body | 6.95e-07 | 41 |