FFCP PHASE1:Hg19::chr2:115918904..115918922,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389023 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000432658,NR_036580,uc002tld.2_5end | |||
|cluster_id=chr2:115918904..115918922,- | |||
|coexpression_cluster_id=C2657 | |||
|description=CAGE_peak_1_at_LOC389023_5end | |||
|id=chr2:115918904..115918922,- | |||
|ontology_enrichment_celltype=CL:0002322!2.84e-10!5;CL:0000039!7.10e-07!7;CL:0000586!7.10e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.09e-07;1!CL:0000167;4.01e-07;1!CL:0000164;4.01e-07;1!CL:0000502;4.01e-07;1!CL:0000172;4.01e-07;1!CL:0000173;4.01e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.09e-07,1;CL:0000167,4.01e-07,1;CL:0000164,4.01e-07,1;CL:0000502,4.01e-07,1;CL:0000172,4.01e-07,1;CL:0000173,4.01e-07,1;CL:0002351,4.01e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;4.01e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.57e-12;31!DOID:1240;3.04e-10;39!DOID:2531;5.48e-08;51!DOID:0060083;5.48e-08;51!DOID:225;2.36e-07;1!DOID:9119;2.99e-07;1!DOID:4430;4.01e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.62e-13,31;DOID:1240,1.44e-12,39;DOID:2531,3.42e-09,51;DOID:0060083,3.42e-09,51;DOID:225,2.36e-07,1;DOID:9119,2.99e-07,1;DOID:4430,4.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001950!3.16e-28!20;UBERON:0002619!5.28e-28!22;UBERON:0002020!4.29e-27!34;UBERON:0003528!4.29e-27!34;UBERON:0001893!7.85e-27!34;UBERON:0001869!1.39e-26!32;UBERON:0001017!1.74e-26!82;UBERON:0005743!3.19e-26!86;UBERON:0001049!8.03e-26!57;UBERON:0005068!8.03e-26!57;UBERON:0006241!8.03e-26!57;UBERON:0007135!8.03e-26!57;UBERON:0002791!1.66e-25!33;UBERON:0002780!2.27e-25!41;UBERON:0001890!2.27e-25!41;UBERON:0006240!2.27e-25!41;UBERON:0003080!1.35e-24!42;UBERON:0000955!3.26e-24!69;UBERON:0006238!3.26e-24!69;UBERON:0000956!4.23e-24!25;UBERON:0000203!4.23e-24!25;UBERON:0002616!6.82e-23!59;UBERON:0000073!1.12e-22!94;UBERON:0001016!1.12e-22!94;UBERON:0003075!8.57e-18!86;UBERON:0007284!8.57e-18!86;UBERON:0003056!1.10e-17!61;UBERON:0002346!1.41e-16!90;UBERON:0007023!5.89e-14!115;UBERON:0000033!5.55e-12!123;UBERON:0000153!5.52e-11!129;UBERON:0007811!5.52e-11!129;UBERON:0004121!8.92e-11!169;UBERON:0001871!1.19e-10!7;UBERON:0000200!1.55e-10!6;UBERON:0000924!2.82e-10!173;UBERON:0006601!2.82e-10!173;UBERON:0001872!4.92e-10!5;UBERON:0000473!1.09e-08!8;UBERON:0000025!2.78e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.63e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.18e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,2.25300606146525,0.69716365721711,0.310983165046111,1.26160425437814,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39139409093234,3.79200805722352,0,0,0,0,0,0,2.50634477090067,0,0,0,0,4.12206413706918,0,0,0,0,1.11362469558097,3.69262196843137,1.6227340708559,5.32915148796512,2.81974010175699,0,0,0,0,0,0,0,0,2.98244294329889,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.568967241427498,0,0,3.10269035917318,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,1.38338342632836,0,0,0,0,0,0,0,0.997270091400938,0,0,0,0,1.11255605286265,0,0,0,0,0,0.265372693510018,0,0.296521128680622,1.23563938946503,1.56632924258183,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0.992975867626496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.886351143382302,0.782205530939212,0,0.213452994739353,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0.315132729228895,0.741742725430498,0.539228350833479,0,0,0,0.136203406111576,0.964518890790115,1.10031549277787,0.415440338029185,0,0,0.546746009922222,0,0,0.0524545881349981,0,6.63363155531526,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,1.0342636508924,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0,0,0.310482014706917,0.415045904808692,0,0,0,0,0.468334905806882,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,8.21526318644885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0114149657094,0,0,0.449604575675217,1.41696576325585,0.159633859057151,0,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0.270150338473579,0.781078098613847,0.826747186004736,0.634158101939068,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.285906176706625,14.0632114442127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59643100472575,0.301925687133347,0.154348316215889,0,0,0,3.53514820652439,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.271965960763659,1.74540276136151,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.459474497674225,3.0084904715085,1.66713136080127,4.55539021265503,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC389023 | |||
}} |
Latest revision as of 14:35, 16 September 2015
Short description: | p1@LOC389023 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC389023_5end |
Coexpression cluster: | C2657_retinoblastoma_nonsmall_acute_myelodysplastic_large_hepatoblastoma_brain |
Association with transcript: | 0bp_to_ENST00000432658, NR_036580, uc002tld.2_5end |
EntrezGene: | LOC389023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.09e-07 | 1 |
peptide hormone secreting cell | 4.01e-07 | 1 |
enteroendocrine cell | 4.01e-07 | 1 |
type D enteroendocrine cell | 4.01e-07 | 1 |
somatostatin secreting cell | 4.01e-07 | 1 |
pancreatic D cell | 4.01e-07 | 1 |
progenitor cell of endocrine pancreas | 4.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.18e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.62e-13 | 31 |
leukemia | 1.44e-12 | 39 |
hematologic cancer | 3.42e-09 | 51 |
immune system cancer | 3.42e-09 | 51 |
syndrome | 2.36e-07 | 1 |
acute myeloid leukemia | 2.99e-07 | 1 |
somatostatinoma | 4.01e-07 | 1 |