FFCP PHASE1:Hg19::chr10:118719724..118719735,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57698 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29319 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=106bp_to_ENST00000490615_5end | |||
|cluster_id=chr10:118719724..118719735,- | |||
|coexpression_cluster_id=C2983 | |||
|description=CAGE_peak_14_at_KIAA1598_5end | |||
|id=chr10:118719724..118719735,- | |||
|ontology_enrichment_celltype=CL:0000148!1.43e-08!10;CL:0000541!1.43e-08!10;CL:0000235!2.35e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.24e-37;10!CL:0000147;8.15e-27;14!CL:0000710;1.11e-18;20!CL:0000235;2.28e-16;6!CL:0002567;9.96e-15;3!CL:0000075;9.49e-14;27!CL:0002566;5.04e-12;1!CL:0002077;1.12e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.47e-38,10;CL:0000541,7.47e-38,10;CL:0000147,5.69e-27,14;CL:0000710,8.62e-19,20;CL:0000235,2.22e-16,6;CL:0002567,5.68e-15,3;CL:0000075,7.91e-14,27;CL:0002566,4.53e-12,1;CL:0000333,1.67e-11,41;CL:0002077,6.70e-11,34;CL:0000133,6.65e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.13e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.20e-22;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.20e-22,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-23!57;UBERON:0005068!1.47e-23!57;UBERON:0006241!1.47e-23!57;UBERON:0007135!1.47e-23!57;UBERON:0001017!2.66e-23!82;UBERON:0000073!5.92e-22!94;UBERON:0001016!5.92e-22!94;UBERON:0005743!1.19e-21!86;UBERON:0002780!1.12e-19!41;UBERON:0001890!1.12e-19!41;UBERON:0006240!1.12e-19!41;UBERON:0003080!4.93e-19!42;UBERON:0002020!5.35e-19!34;UBERON:0003528!5.35e-19!34;UBERON:0001893!8.20e-19!34;UBERON:0000955!1.60e-18!69;UBERON:0006238!1.60e-18!69;UBERON:0002791!9.26e-18!33;UBERON:0002616!1.44e-17!59;UBERON:0001869!2.75e-16!32;UBERON:0003075!2.75e-15!86;UBERON:0007284!2.75e-15!86;UBERON:0002346!3.80e-14!90;UBERON:0004121!5.77e-12!169;UBERON:0003056!8.41e-12!61;UBERON:0000924!2.23e-11!173;UBERON:0006601!2.23e-11!173;UBERON:0002308!2.72e-11!9;UBERON:0000125!2.72e-11!9;UBERON:0002619!1.10e-10!22;UBERON:0007023!1.17e-10!115;UBERON:0000956!1.57e-10!25;UBERON:0000203!1.57e-10!25;UBERON:0000033!1.89e-09!123;UBERON:0000153!3.21e-09!129;UBERON:0007811!3.21e-09!129;UBERON:0002420!1.07e-08!9;UBERON:0007245!1.07e-08!9;UBERON:0010009!1.07e-08!9;UBERON:0010011!1.07e-08!9;UBERON:0000454!1.07e-08!9;UBERON:0001950!1.96e-08!20;UBERON:0009663!2.08e-08!7;UBERON:0002298!7.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.13e-11;1!UBERON:0000941;1.13e-11;1!UBERON:0001785;1.13e-11;1!UBERON:0002464;1.13e-11;1!UBERON:0004904;1.13e-11;1!UBERON:0001021;1.13e-11;1!UBERON:0009661;1.13e-11;1!UBERON:0002950;1.13e-11;1!UBERON:0001891;1.13e-11;1!UBERON:0001872;3.30e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.61e-12,1;UBERON:0001785,9.61e-12,1;UBERON:0002464,9.61e-12,1;UBERON:0004904,9.61e-12,1;UBERON:0001021,9.61e-12,1;UBERON:0003902,9.61e-12,1;UBERON:0005425,9.61e-12,1;UBERON:0002038,1.81e-11,1;UBERON:0009661,1.81e-11,1;UBERON:0002950,1.81e-11,1;UBERON:0001891,1.81e-11,1;UBERON:0009616,1.81e-11,1;UBERON:0010286,1.81e-11,1;UBERON:0001872,3.90e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,3.27605971194933,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,3.6828778689458,1.90994212779139,0,1.71072446022705,4.8328921570562,9.31063479316144,3.14409075893636,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,7.4656138226573,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0.443716206147409,0.0620964029413835,0,0.249960815924213,8.49235058233228,5.99477200444432,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0.504143392443436,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,0,1.03343398250592,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.471346769748006,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,1.48523200163543,0.4226557275834,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,1.06090177505535,1.07185652062471,0.829169439458779,0.930896962757057,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@KIAA1598 | |||
}} |
Latest revision as of 14:52, 16 September 2015
Short description: | p14@KIAA1598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KIAA1598_5end |
Coexpression cluster: | C2983_Melanocyte_astrocytoma_melanoma_Macrophage_Monocytederived_Dendritic_substantia |
Association with transcript: | 106bp_to_ENST00000490615_5end |
EntrezGene: | KIAA1598 |
HGNC: | 29319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.47e-38 | 10 |
melanoblast | 7.47e-38 | 10 |
pigment cell | 5.69e-27 | 14 |
neurecto-epithelial cell | 8.62e-19 | 20 |
macrophage | 2.22e-16 | 6 |
light melanocyte | 5.68e-15 | 3 |
columnar/cuboidal epithelial cell | 7.91e-14 | 27 |
dark melanocyte | 4.53e-12 | 1 |
migratory neural crest cell | 1.67e-11 | 41 |
ecto-epithelial cell | 6.70e-11 | 34 |
neurectodermal cell | 6.65e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.61e-12 | 1 |
cranial nerve | 9.61e-12 | 1 |
nerve trunk | 9.61e-12 | 1 |
nerve connecting eye with brain | 9.61e-12 | 1 |
nerve | 9.61e-12 | 1 |
retinal neural layer | 9.61e-12 | 1 |
presumptive neural retina | 9.61e-12 | 1 |
substantia nigra | 1.81e-11 | 1 |
midbrain nucleus | 1.81e-11 | 1 |
regional part of midbrain | 1.81e-11 | 1 |
midbrain | 1.81e-11 | 1 |
presumptive midbrain | 1.81e-11 | 1 |
midbrain neural tube | 1.81e-11 | 1 |
parietal lobe | 3.90e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.20e-22 | 2 |