FFCP PHASE1:Hg19::chr10:118897716..118897727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11023 | |EntrezGene=11023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12660 | |HGNC=12660 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQQ9 | |UniProt=Q5SQQ9 | ||
|association_with_transcript=84bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | |association_with_transcript=84bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | ||
|cluster_id=chr10:118897716..118897727,- | |||
|description=CAGE_peak_7_at_VAX1_5end | |description=CAGE_peak_7_at_VAX1_5end | ||
|id=chr10:118897716..118897727,- | |id=chr10:118897716..118897727,- | ||
|ontology_enrichment_celltype=CL:0002605!7.09e-08!3 | |ontology_enrichment_celltype=CL:0002605!7.09e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.98e-16;1!UBERON:0000358;9.28e-16;1 | |||
|ontology_enrichment_disease=DOID:171!1.78e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:3347;9.28e-16;1!DOID:3371;2.06e-15;1!DOID:4549;2.06e-15;1!DOID:5861;2.06e-15;1!DOID:6496;2.06e-15;1!DOID:171;2.07e-13;10!DOID:201;1.85e-10;6!DOID:0060100;1.85e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,9.99e-16,1;DOID:3371,3.17e-15,1;DOID:4549,3.17e-15,1;DOID:5861,3.17e-15,1;DOID:6496,3.17e-15,1;DOID:171,1.75e-13,10;DOID:201,2.19e-10,6;DOID:0060100,2.19e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.59e-50!41;UBERON:0001890!2.59e-50!41;UBERON:0006240!2.59e-50!41;UBERON:0001049!6.01e-50!57;UBERON:0005068!6.01e-50!57;UBERON:0006241!6.01e-50!57;UBERON:0007135!6.01e-50!57;UBERON:0001893!8.78e-50!34;UBERON:0003080!6.25e-49!42;UBERON:0002791!1.55e-47!33;UBERON:0002020!1.30e-45!34;UBERON:0003528!1.30e-45!34;UBERON:0001869!4.31e-45!32;UBERON:0001017!1.49e-44!82;UBERON:0000955!1.83e-44!69;UBERON:0006238!1.83e-44!69;UBERON:0000073!1.02e-43!94;UBERON:0001016!1.02e-43!94;UBERON:0002616!1.78e-42!59;UBERON:0005743!5.58e-42!86;UBERON:0002346!2.21e-38!90;UBERON:0003075!1.15e-31!86;UBERON:0007284!1.15e-31!86;UBERON:0003056!3.54e-31!61;UBERON:0000956!8.09e-30!25;UBERON:0000203!8.09e-30!25;UBERON:0000924!2.65e-27!173;UBERON:0006601!2.65e-27!173;UBERON:0001950!9.12e-27!20;UBERON:0000033!1.08e-24!123;UBERON:0002619!4.56e-24!22;UBERON:0000153!4.83e-23!129;UBERON:0007811!4.83e-23!129;UBERON:0004121!1.28e-22!169;UBERON:0007023!3.67e-20!115;UBERON:0009663!6.26e-18!7;UBERON:0002420!1.30e-17!9;UBERON:0007245!1.30e-17!9;UBERON:0010009!1.30e-17!9;UBERON:0010011!1.30e-17!9;UBERON:0000454!1.30e-17!9;UBERON:0002308!1.42e-17!9;UBERON:0000125!1.42e-17!9;UBERON:0001872!4.35e-13!5;UBERON:0000025!1.25e-12!194;UBERON:0000369!6.09e-11!4;UBERON:0002435!6.09e-11!4;UBERON:0000204!6.09e-11!4;UBERON:0010082!6.09e-11!4;UBERON:0001871!2.99e-10!7;UBERON:0000200!4.41e-10!6;UBERON:0004111!1.91e-09!241;UBERON:0005383!1.27e-08!3;UBERON:0005382!1.27e-08!3;UBERON:0002771!1.33e-07!3;UBERON:0002298!1.42e-07!8;UBERON:0000477!1.90e-07!286;UBERON:0000064!2.95e-07!219;UBERON:0005162!7.43e-07!2;UBERON:0000122!7.43e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.82e-32;4!UBERON:0000923;1.82e-32;4!UBERON:0010316;1.82e-32;4!UBERON:0005291;1.82e-32;4!UBERON:0002050;3.94e-26;5!UBERON:0005423;3.94e-26;5!UBERON:0000941;5.98e-16;1!UBERON:0001785;5.98e-16;1!UBERON:0002464;5.98e-16;1!UBERON:0004904;5.98e-16;1!UBERON:0001021;5.98e-16;1!UBERON:0003714;1.24e-08;2!UBERON:0005162;1.24e-08;2!UBERON:0000122;1.24e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.56e-16,1;UBERON:0001785,5.56e-16,1;UBERON:0002464,5.56e-16,1;UBERON:0004904,5.56e-16,1;UBERON:0001021,5.56e-16,1;UBERON:0003902,5.56e-16,1;UBERON:0005425,5.56e-16,1;UBERON:0003714,1.20e-08,2;UBERON:0005162,1.20e-08,2;UBERON:0000122,1.20e-08,2;UBERON:0002346,1.76e-07,86 | |||
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| ||
|short_description=p7@VAX1 | |short_description=p7@VAX1 | ||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p7@VAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_VAX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
EntrezGene: | VAX1 |
HGNC: | 12660 |
UniProt: | Q5SQQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.56e-16 | 1 |
cranial nerve | 5.56e-16 | 1 |
nerve trunk | 5.56e-16 | 1 |
nerve connecting eye with brain | 5.56e-16 | 1 |
nerve | 5.56e-16 | 1 |
retinal neural layer | 5.56e-16 | 1 |
presumptive neural retina | 5.56e-16 | 1 |
neural tissue | 1.20e-08 | 2 |
multi cell component structure | 1.20e-08 | 2 |
neuron projection bundle | 1.20e-08 | 2 |
neurectoderm | 1.76e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 9.99e-16 | 1 |
chondrosarcoma | 3.17e-15 | 1 |
extraosseous chondrosarcoma | 3.17e-15 | 1 |
myxoid chondrosarcoma | 3.17e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 3.17e-15 | 1 |
neuroectodermal tumor | 1.75e-13 | 10 |
connective tissue cancer | 2.19e-10 | 6 |
musculoskeletal system cancer | 2.19e-10 | 6 |