FFCP PHASE1:Hg19::chr1:13840448..13840477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126755 | |EntrezGene=126755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27005 | |HGNC=27005 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT99 | |UniProt=Q5VT99 | ||
|association_with_transcript=65bp_to_ENST00000376085_5end | |association_with_transcript=65bp_to_ENST00000376085_5end | ||
|cluster_id=chr1:13840448..13840477,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_LRRC38_5end | |description=CAGE_peak_4_at_LRRC38_5end | ||
|id=chr1:13840448..13840477,- | |id=chr1:13840448..13840477,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.00e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;7.85e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.75e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;2.81e-17;2!UBERON:0002757;2.81e-17;2!UBERON:0010134;2.81e-17;2!UBERON:0005408;2.81e-17;2!UBERON:0001899;2.81e-17;2!UBERON:0005090;4.35e-17;2!UBERON:0001630;4.35e-17;2!UBERON:0002370;1.80e-16;2!UBERON:0005058;1.80e-16;2!UBERON:0009113;1.80e-16;2!UBERON:0001723;3.25e-11;3!UBERON:0001033;3.25e-11;3!UBERON:0001389;1.88e-09;1!UBERON:0000026;1.88e-09;1!UBERON:0008784;1.88e-09;1!UBERON:0006058;1.88e-09;1!UBERON:0003663;1.88e-09;1!UBERON:0004256;1.88e-09;1!UBERON:0004708;1.88e-09;1!UBERON:0002101;1.88e-09;1!UBERON:0004709;1.88e-09;1!UBERON:0002529;1.88e-09;1!UBERON:0010538;1.88e-09;1!UBERON:0003661;1.88e-09;1!UBERON:0010890;1.88e-09;1!UBERON:0002471;1.88e-09;1!UBERON:0001383;1.88e-09;1!UBERON:0010758;1.88e-09;1!UBERON:0010707;1.88e-09;1!UBERON:0000978;1.88e-09;1!UBERON:0002103;1.88e-09;1!UBERON:0001665;1.88e-09;1!UBERON:0003823;1.88e-09;1!UBERON:0000154;1.88e-09;1!UBERON:0010709;1.88e-09;1!UBERON:0002426;2.31e-09;1!UBERON:0003831;2.31e-09;1!UBERON:0003898;2.31e-09;1!UBERON:0004830;2.31e-09;1!UBERON:0003830;2.31e-09;1!UBERON:0005175;2.31e-09;1!UBERON:0001774;2.31e-09;1!UBERON:0001103;2.31e-09;1!UBERON:0003296;4.37e-09;4!UBERON:0010133;4.37e-09;4!UBERON:0002784;4.37e-09;4!UBERON:0002346;8.18e-09;4!UBERON:0000923;8.18e-09;4!UBERON:0010316;8.18e-09;4!UBERON:0005291;8.18e-09;4!UBERON:0001134;3.48e-08;16!UBERON:0002036;3.48e-08;16!UBERON:0002050;3.25e-07;5!UBERON:0005423;3.25e-07;5!UBERON:0004177;4.10e-07;5!UBERON:0005057;4.10e-07;5 | |||
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|short_description=p4@LRRC38 | |short_description=p4@LRRC38 | ||
}} | }} |
Latest revision as of 15:41, 16 September 2015
Short description: | p4@LRRC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC38_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 65bp_to_ENST00000376085_5end |
EntrezGene: | LRRC38 |
HGNC: | 27005 |
UniProt: | Q5VT99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.75e-09 | 1 |