FFCP PHASE1:Hg19::chr13:113951515..113951526,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:113951515..113951526,+ to FFCP PHASE1:Hg19::chr13:113951515..113951526,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3916 | |EntrezGene=3916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6499 | |HGNC=6499 | ||
|TSSclassifier=strong | |||
|UniProt=P11279 | |UniProt=P11279 | ||
|association_with_transcript=-29bp_to_ENST00000332556_5end | |||
|cluster_id=chr13:113951515..113951526,+ | |||
|description=CAGE_peak_3_at_LAMP1_5end | |||
|id=chr13:113951515..113951526,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.64e-13!119;CL:0000220!3.17e-12!246;CL:0002321!8.28e-12!248;CL:0002078!3.15e-11!44;CL:0000115!2.89e-10!35;CL:0000055!7.45e-10!180;CL:0000213!6.59e-09!57;CL:0000215!6.59e-09!57;CL:0002139!8.52e-08!24;CL:0000057!8.24e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.28e-09;36!CL:0002078;1.36e-08;45!CL:0002139;1.01e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.13e-14,121;CL:0002321,2.62e-12,250;CL:0002078,1.17e-11,45;CL:0000115,1.06e-10,36;CL:0000213,2.79e-09,58;CL:0000215,2.79e-09,58;CL:0002139,8.51e-08,24;CL:0000057,4.03e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.08e-16!625;UBERON:0000468!1.23e-16!659;UBERON:0000480!2.09e-16!626;UBERON:0000477!9.41e-16!286;UBERON:0003914!2.52e-14!118;UBERON:0004111!4.75e-14!241;UBERON:0002049!2.95e-13!79;UBERON:0007798!2.95e-13!79;UBERON:0000055!1.36e-12!69;UBERON:0000119!1.42e-12!312;UBERON:0000483!2.79e-12!309;UBERON:0000923!2.02e-11!604;UBERON:0005291!2.02e-11!604;UBERON:0006598!2.02e-11!604;UBERON:0002532!2.02e-11!604;UBERON:0002050!2.17e-11!605;UBERON:0005423!2.17e-11!605;UBERON:0000922!5.44e-11!612;UBERON:0000475!6.39e-11!365;UBERON:0004872!7.33e-11!84;UBERON:0002100!2.15e-10!216;UBERON:0001981!3.55e-10!60;UBERON:0007500!3.55e-10!60;UBERON:0004537!3.55e-10!60;UBERON:0006965!3.55e-10!60;UBERON:0000025!4.02e-10!194;UBERON:0003886!1.89e-09!63;UBERON:0005256!3.31e-09!143;UBERON:0002553!3.80e-09!70;UBERON:0000481!7.86e-09!347;UBERON:0001637!9.32e-09!42;UBERON:0003509!9.32e-09!42;UBERON:0004572!9.32e-09!42;UBERON:0000490!1.53e-08!138;UBERON:0000466!6.19e-08!126;UBERON:0000062!8.35e-08!511;UBERON:0000926!1.12e-07!448;UBERON:0004120!1.12e-07!448;UBERON:0006603!1.12e-07!448;UBERON:0004573!1.86e-07!33;UBERON:0004571!1.86e-07!33;UBERON:0004535!2.99e-07!110;UBERON:0001009!4.23e-07!113;UBERON:0002417!5.69e-07!61;UBERON:0000916!5.69e-07!61;UBERON:0003104!5.87e-07!238;UBERON:0009142!5.87e-07!238;UBERON:0000353!6.54e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.31e-07;42!UBERON:0003509;1.31e-07;42!UBERON:0004572;1.31e-07;42!UBERON:0000055;1.70e-07;65!UBERON:0004573;4.16e-07;33!UBERON:0004571;4.16e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.33e-14,117;UBERON:0004111,1.59e-13,240;UBERON:0000119,5.30e-13,309;UBERON:0002049,7.67e-13,78;UBERON:0007798,7.67e-13,78;UBERON:0000483,1.05e-12,306;UBERON:0000055,3.59e-12,68;UBERON:0004872,1.75e-10,83;UBERON:0007500,8.98e-10,59;UBERON:0001981,8.98e-10,59;UBERON:0004537,8.98e-10,59;UBERON:0006965,8.98e-10,59;UBERON:0002100,1.16e-09,199;UBERON:0000025,1.24e-09,192;UBERON:0000922,8.01e-09,592;UBERON:0001637,9.31e-09,42;UBERON:0003509,9.31e-09,42;UBERON:0004572,9.31e-09,42;UBERON:0003104,1.81e-08,160;UBERON:0009142,1.81e-08,160;UBERON:0000490,2.41e-08,148;UBERON:0005256,4.14e-08,122;UBERON:0005423,4.87e-08,581;UBERON:0003886,6.42e-08,54;UBERON:0002553,1.22e-07,61;UBERON:0004573,1.85e-07,33;UBERON:0004571,1.85e-07,33;UBERON:0000923,2.55e-07,560;UBERON:0010316,2.55e-07,560;UBERON:0005291,2.55e-07,560;UBERON:0006598,2.55e-07,560;UBERON:0010317,2.55e-07,560;UBERON:0002532,2.55e-07,560;UBERON:0002050,3.86e-07,564;UBERON:0004535,5.67e-07,109;UBERON:0001009,7.93e-07,112;UBERON:0002417,9.19e-07,60;UBERON:0000916,9.19e-07,60 | |||
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| ||
|short_description=p3@LAMP1 | |||
}} | }} |
Latest revision as of 15:44, 16 September 2015
Short description: | p3@LAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000332556_5end |
EntrezGene: | LAMP1 |
HGNC: | 6499 |
UniProt: | P11279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.13e-14 | 121 |
embryonic cell | 2.62e-12 | 250 |
meso-epithelial cell | 1.17e-11 | 45 |
endothelial cell | 1.06e-10 | 36 |
lining cell | 2.79e-09 | 58 |
barrier cell | 2.79e-09 | 58 |
endothelial cell of vascular tree | 8.51e-08 | 24 |
fibroblast | 4.03e-07 | 76 |