FFCP PHASE1:Hg19::chr2:27498297..27498318,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285126 | |EntrezGene=285126 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24844 | |HGNC=24844 | ||
|TSSclassifier=strong | |||
|UniProt=C9J078 | |UniProt=C9J078 | ||
|association_with_transcript=0bp_to_ENST00000420191_5end | |association_with_transcript=0bp_to_ENST00000420191_5end | ||
|cluster_id=chr2:27498297..27498318,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_DNAJC5G_5end | |description=CAGE_peak_1_at_DNAJC5G_5end | ||
|id=chr2:27498297..27498318,+ | |id=chr2:27498297..27498318,+ | ||
|ontology_enrichment_celltype=CL:0000039!8.36e-24!7;CL:0000586!8.36e-24!7;CL:0000632!2.49e-10!2 | |ontology_enrichment_celltype=CL:0000039!8.36e-24!7;CL:0000586!8.36e-24!7;CL:0000632!2.49e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.49e-20;7!CL:0000586;9.49e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.49e-20,7;CL:0000586,9.49e-20,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.27e-53;10!UBERON:0005564;5.27e-53;10 | |||
|ontology_enrichment_disease=DOID:3095!5.14e-08!22;DOID:2994!5.14e-08!22 | |ontology_enrichment_disease=DOID:3095!5.14e-08!22;DOID:2994!5.14e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.74e-07;22!DOID:2994;5.74e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.61e-56!8;UBERON:0003135!3.29e-41!11;UBERON:0000991!1.03e-21!21;UBERON:0009196!1.03e-21!21;UBERON:0009117!1.03e-21!21;UBERON:0005564!1.03e-21!21;UBERON:0004176!9.76e-21!22;UBERON:0003101!9.76e-21!22;UBERON:0000079!9.76e-21!22;UBERON:0007190!5.62e-19!1;UBERON:0002323!5.60e-10!46;UBERON:0003133!1.45e-09!48;UBERON:0004458!2.27e-09!49;UBERON:0005156!8.73e-08!59;UBERON:0000990!8.73e-08!59;UBERON:0003886!2.72e-07!63 | |ontology_enrichment_uberon=UBERON:0000473!1.61e-56!8;UBERON:0003135!3.29e-41!11;UBERON:0000991!1.03e-21!21;UBERON:0009196!1.03e-21!21;UBERON:0009117!1.03e-21!21;UBERON:0005564!1.03e-21!21;UBERON:0004176!9.76e-21!22;UBERON:0003101!9.76e-21!22;UBERON:0000079!9.76e-21!22;UBERON:0007190!5.62e-19!1;UBERON:0002323!5.60e-10!46;UBERON:0003133!1.45e-09!48;UBERON:0004458!2.27e-09!49;UBERON:0005156!8.73e-08!59;UBERON:0000990!8.73e-08!59;UBERON:0003886!2.72e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.12e-66;8!UBERON:0003135;2.86e-48;11!UBERON:0000991;1.12e-25;21!UBERON:0003101;1.51e-24;22!UBERON:0000079;1.51e-24;22!UBERON:0002323;2.91e-10;45!UBERON:0003133;2.35e-08;44!UBERON:0002553;7.42e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.12e-66,8;UBERON:0003135,2.86e-48,11;UBERON:0000991,1.12e-25,21;UBERON:0009196,1.12e-25,21;UBERON:0009117,1.12e-25,21;UBERON:0005564,1.12e-25,21;UBERON:0004176,1.51e-24,22;UBERON:0003101,1.51e-24,22;UBERON:0000079,1.51e-24,22;UBERON:0002323,4.39e-12,46;UBERON:0003133,1.32e-11,48;UBERON:0004458,2.22e-11,49;UBERON:0003886,2.23e-10,54;UBERON:0005156,1.52e-09,59;UBERON:0000990,1.52e-09,59;UBERON:0002553,3.00e-09,61 | |||
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|short_description=p1@DNAJC5G | |short_description=p1@DNAJC5G | ||
}} | }} |
Latest revision as of 16:44, 16 September 2015
Short description: | p1@DNAJC5G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNAJC5G_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000420191_5end |
EntrezGene: | DNAJC5G |
HGNC: | 24844 |
UniProt: | C9J078 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.49e-20 | 7 |
germ cell | 9.49e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.12e-66 | 8 |
male reproductive organ | 2.86e-48 | 11 |
gonad | 1.12e-25 | 21 |
indifferent external genitalia | 1.12e-25 | 21 |
indifferent gonad | 1.12e-25 | 21 |
gonad primordium | 1.12e-25 | 21 |
external genitalia | 1.51e-24 | 22 |
male organism | 1.51e-24 | 22 |
male reproductive system | 1.51e-24 | 22 |
body cavity | 4.39e-12 | 46 |
reproductive organ | 1.32e-11 | 48 |
body cavity or lining | 2.22e-11 | 49 |
body cavity precursor | 2.23e-10 | 54 |
reproductive structure | 1.52e-09 | 59 |
reproductive system | 1.52e-09 | 59 |
anatomical cavity | 3.00e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |