FFCP PHASE1:Hg19::chr1:24239954..24239975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1269 | |EntrezGene=1269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2160 | |HGNC=2160 | ||
|TSSclassifier=strong | |||
|UniProt=P34972 | |UniProt=P34972 | ||
|association_with_transcript=-102bp_to_ENST00000374472_5end | |association_with_transcript=-102bp_to_ENST00000374472_5end | ||
|cluster_id=chr1:24239954..24239975,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_4_at_CNR2_5end | |description=CAGE_peak_4_at_CNR2_5end | ||
|id=chr1:24239954..24239975,- | |id=chr1:24239954..24239975,- | ||
|ontology_enrichment_celltype=CL:0000945!2.62e-27!24;CL:0000826!2.62e-27!24;CL:0002032!4.48e-24!165;CL:0000837!4.48e-24!165;CL:0000037!8.77e-23!172;CL:0000566!8.77e-23!172;CL:0000988!4.14e-21!182;CL:0000542!1.92e-19!53;CL:0000051!1.92e-19!53;CL:0002031!2.04e-18!124;CL:0002087!6.83e-18!119;CL:0000838!2.25e-17!52;CL:0000738!1.08e-15!140;CL:0000236!1.79e-14!14;CL:0000817!1.13e-13!3;CL:0000039!5.52e-11!7;CL:0000586!5.52e-11!7;CL:0000785!7.73e-10!2;CL:0000955!7.73e-10!2;CL:0000818!7.73e-10!2;CL:0000954!7.73e-10!2;CL:0000816!7.73e-10!2;CL:0000763!3.26e-08!112;CL:0000049!3.26e-08!112;CL:0000134!5.57e-07!358 | |ontology_enrichment_celltype=CL:0000945!2.62e-27!24;CL:0000826!2.62e-27!24;CL:0002032!4.48e-24!165;CL:0000837!4.48e-24!165;CL:0000037!8.77e-23!172;CL:0000566!8.77e-23!172;CL:0000988!4.14e-21!182;CL:0000542!1.92e-19!53;CL:0000051!1.92e-19!53;CL:0002031!2.04e-18!124;CL:0002087!6.83e-18!119;CL:0000838!2.25e-17!52;CL:0000738!1.08e-15!140;CL:0000236!1.79e-14!14;CL:0000817!1.13e-13!3;CL:0000039!5.52e-11!7;CL:0000586!5.52e-11!7;CL:0000785!7.73e-10!2;CL:0000955!7.73e-10!2;CL:0000818!7.73e-10!2;CL:0000954!7.73e-10!2;CL:0000816!7.73e-10!2;CL:0000763!3.26e-08!112;CL:0000049!3.26e-08!112;CL:0000134!5.57e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.88e-46;7!CL:0000586;8.88e-46;7!CL:0002127;2.82e-21;1!CL:0000911;2.82e-21;1!CL:0000814;2.82e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.97e-46,7;CL:0000586,9.97e-46,7;CL:0002127,2.30e-21,1;CL:0000914,2.30e-21,1;CL:0000911,2.30e-21,1;CL:0000814,2.30e-21,1;CL:0002042,2.30e-21,1;CL:0002039,2.30e-21,1;CL:0002040,2.30e-21,1;CL:0002041,2.30e-21,1;CL:0000893,2.23e-11,2;CL:0002489,2.23e-11,2;CL:0000809,2.23e-11,2;CL:0000808,2.23e-11,2;CL:0000894,2.23e-11,2;CL:0000806,2.23e-11,2;CL:0000807,2.23e-11,2;CL:0000805,2.23e-11,2;CL:0002425,2.23e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.13e-32;10!UBERON:0005564;3.13e-32;10!CL:0002425;2.47e-11;2 | |||
|ontology_enrichment_disease=DOID:2531!1.09e-20!51;DOID:0060083!1.09e-20!51;DOID:0060058!1.80e-14!10;DOID:1240!1.17e-11!39 | |||
|ontology_enrichment_disease_v019=DOID:630;6.31e-21;1!DOID:0050177;6.31e-21;1!DOID:0050427;6.31e-21;1!DOID:3095;6.43e-15;22!DOID:2994;6.43e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.43e-21,1;DOID:0050177,9.43e-21,1;DOID:0050427,9.43e-21,1;DOID:3095,6.67e-15,22;DOID:2994,6.67e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.30e-09!8;UBERON:0003135!5.52e-07!11;UBERON:0002193!5.98e-07!112;UBERON:0002390!6.03e-07!102;UBERON:0003061!6.03e-07!102 | |ontology_enrichment_uberon=UBERON:0000473!1.30e-09!8;UBERON:0003135!5.52e-07!11;UBERON:0002193!5.98e-07!112;UBERON:0002390!6.03e-07!102;UBERON:0003061!6.03e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.89e-40;8!UBERON:0003135;2.36e-29;11!UBERON:0000991;1.31e-15;21!UBERON:0003101;6.43e-15;22!UBERON:0000079;6.43e-15;22!UBERON:0002323;3.87e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.30e-40,8;UBERON:0003135,2.54e-29,11;UBERON:0000991,1.36e-15,21;UBERON:0009196,1.36e-15,21;UBERON:0009117,1.36e-15,21;UBERON:0005564,1.36e-15,21;UBERON:0004176,6.67e-15,22;UBERON:0003101,6.67e-15,22;UBERON:0000079,6.67e-15,22;UBERON:0002323,2.65e-07,46;UBERON:0003133,5.21e-07,48;UBERON:0004458,7.16e-07,49 | |||
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| ||
|short_description=p4@CNR2 | |short_description=p4@CNR2 | ||
}} | }} |
Latest revision as of 18:48, 16 September 2015
Short description: | p4@CNR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNR2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -102bp_to_ENST00000374472_5end |
EntrezGene: | CNR2 |
HGNC: | 2160 |
UniProt: | P34972 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.97e-46 | 7 |
germ cell | 9.97e-46 | 7 |
innate effector T cell | 2.30e-21 | 1 |
immature NK T cell | 2.30e-21 | 1 |
effector T cell | 2.30e-21 | 1 |
mature NK T cell | 2.30e-21 | 1 |
immature NK T cell stage IV | 2.30e-21 | 1 |
immature NK T cell stage I | 2.30e-21 | 1 |
immature NK T cell stage II | 2.30e-21 | 1 |
immature NK T cell stage III | 2.30e-21 | 1 |
thymocyte | 2.23e-11 | 2 |
double negative thymocyte | 2.23e-11 | 2 |
double-positive, alpha-beta thymocyte | 2.23e-11 | 2 |
DN4 thymocyte | 2.23e-11 | 2 |
DN1 thymic pro-T cell | 2.23e-11 | 2 |
DN2 thymocyte | 2.23e-11 | 2 |
DN3 thymocyte | 2.23e-11 | 2 |
immature single positive thymocyte | 2.23e-11 | 2 |
early T lineage precursor | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 4.30e-40 | 8 |
male reproductive organ | 2.54e-29 | 11 |
gonad | 1.36e-15 | 21 |
indifferent external genitalia | 1.36e-15 | 21 |
indifferent gonad | 1.36e-15 | 21 |
gonad primordium | 1.36e-15 | 21 |
external genitalia | 6.67e-15 | 22 |
male organism | 6.67e-15 | 22 |
male reproductive system | 6.67e-15 | 22 |
body cavity | 2.65e-07 | 46 |
reproductive organ | 5.21e-07 | 48 |
body cavity or lining | 7.16e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.43e-21 | 1 |
monogenic disease | 9.43e-21 | 1 |
xeroderma pigmentosum | 9.43e-21 | 1 |
germ cell and embryonal cancer | 6.67e-15 | 22 |
germ cell cancer | 6.67e-15 | 22 |