FFCP PHASE1:Hg19::chr13:20806445..20806465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10804 | |EntrezGene=10804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4288 | |HGNC=4288 | ||
|TSSclassifier=strong | |||
|UniProt=O95452 | |UniProt=O95452 | ||
|association_with_transcript=-3bp_to_ENST00000400065_5end | |association_with_transcript=-3bp_to_ENST00000400065_5end | ||
|cluster_id=chr13:20806445..20806465,- | |||
|coexpression_cluster_id=C3356 | |coexpression_cluster_id=C3356 | ||
|description=CAGE_peak_1_at_GJB6_5end | |description=CAGE_peak_1_at_GJB6_5end |
Latest revision as of 18:51, 16 September 2015
Short description: | p1@GJB6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GJB6_5end |
Coexpression cluster: | C3356_Urothelial_cervical_tongue_Neutrophils_keratoacanthoma_uterus_Sebocyte |
Association with transcript: | -3bp_to_ENST00000400065_5end |
EntrezGene: | GJB6 |
HGNC: | 4288 |
UniProt: | O95452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GJB6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.10e-12 | 42 |
respiratory epithelial cell | 1.05e-09 | 13 |
endodermal cell | 1.71e-07 | 58 |
transitional epithelial cell | 2.35e-07 | 4 |
urothelial cell | 2.35e-07 | 4 |
general ecto-epithelial cell | 5.90e-07 | 14 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 5.64e-38 | 56 |
neural rod | 5.64e-38 | 56 |
future spinal cord | 5.64e-38 | 56 |
neural keel | 5.64e-38 | 56 |
regional part of nervous system | 6.93e-35 | 53 |
regional part of brain | 6.93e-35 | 53 |
ecto-epithelium | 3.87e-29 | 104 |
regional part of forebrain | 1.54e-28 | 41 |
forebrain | 1.54e-28 | 41 |
anterior neural tube | 1.54e-28 | 41 |
Showing 1 to 10 of 52 entries