FFCP PHASE1:Hg19::chr20:48429233..48429257,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23315 | |EntrezGene=23315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20728 | |HGNC=20728 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2E8 | |UniProt=Q9Y2E8 | ||
|association_with_transcript=0bp_to_ENST00000417961,NM_015266,uc002xuv.1,uc010gib.1,uc010zyj.1,uc010zyk.1,uc010zyl.1,uc010zym.1_5end | |association_with_transcript=0bp_to_ENST00000417961,NM_015266,uc002xuv.1,uc010gib.1,uc010zyj.1,uc010zyk.1,uc010zyl.1,uc010zym.1_5end | ||
|cluster_id=chr20:48429233..48429257,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SLC9A8_5end | |description=CAGE_peak_3_at_SLC9A8_5end | ||
|id=chr20:48429233..48429257,+ | |id=chr20:48429233..48429257,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.83e-29!76;CL:0002057!1.16e-28!42;CL:0000860!6.64e-28!45;CL:0000738!8.26e-28!140;CL:0000557!6.06e-25!71;CL:0002009!2.81e-22!65;CL:0000839!9.64e-22!70;CL:0002194!3.29e-21!63;CL:0000576!3.29e-21!63;CL:0000040!3.29e-21!63;CL:0000559!3.29e-21!63;CL:0002031!1.56e-19!124;CL:0002087!1.21e-18!119;CL:0000037!1.66e-17!172;CL:0000566!1.66e-17!172;CL:0000763!5.59e-16!112;CL:0000049!5.59e-16!112;CL:0000988!1.56e-15!182;CL:0002032!1.62e-15!165;CL:0000837!1.62e-15!165;CL:0000063!1.03e-07!578;CL:0002393!2.43e-07!9;CL:0002397!2.43e-07!9;CL:0000094!3.28e-07!8;CL:0000134!8.71e-07!358 | |ontology_enrichment_celltype=CL:0000766!7.83e-29!76;CL:0002057!1.16e-28!42;CL:0000860!6.64e-28!45;CL:0000738!8.26e-28!140;CL:0000557!6.06e-25!71;CL:0002009!2.81e-22!65;CL:0000839!9.64e-22!70;CL:0002194!3.29e-21!63;CL:0000576!3.29e-21!63;CL:0000040!3.29e-21!63;CL:0000559!3.29e-21!63;CL:0002031!1.56e-19!124;CL:0002087!1.21e-18!119;CL:0000037!1.66e-17!172;CL:0000566!1.66e-17!172;CL:0000763!5.59e-16!112;CL:0000049!5.59e-16!112;CL:0000988!1.56e-15!182;CL:0002032!1.62e-15!165;CL:0000837!1.62e-15!165;CL:0000063!1.03e-07!578;CL:0002393!2.43e-07!9;CL:0002397!2.43e-07!9;CL:0000094!3.28e-07!8;CL:0000134!8.71e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.01e-54;33!CL:0002057;3.01e-54;33!CL:0000576;5.33e-40;48!CL:0000473;2.25e-39;39!CL:0000234;2.25e-39;39!CL:0000766;1.99e-33;69!CL:0000094;5.54e-17;8!CL:0002087;1.18e-16;104!CL:0000763;5.47e-15;100!CL:0000738;9.01e-14;136!CL:0002393;1.37e-12;6!CL:0002397;1.37e-12;6!CL:0000081;7.85e-12;11!CL:0000988;9.49e-10;177!CL:0000775;1.30e-07;3!CL:0000767;5.11e-07;3!CL:0000219;9.44e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.35e-76,42;CL:0002057,2.35e-76,42;CL:0000766,3.64e-69,72;CL:0000473,4.50e-68,48;CL:0000234,4.50e-68,48;CL:0000738,2.10e-66,136;CL:0000557,1.27e-58,67;CL:0002009,1.56e-54,61;CL:0000037,9.96e-53,168;CL:0000839,2.76e-52,66;CL:0002194,1.34e-51,59;CL:0000576,1.34e-51,59;CL:0000040,1.34e-51,59;CL:0000559,1.34e-51,59;CL:0000988,6.07e-49,177;CL:0000763,1.44e-47,108;CL:0000049,1.44e-47,108;CL:0002031,2.66e-47,120;CL:0002087,2.85e-46,115;CL:0002032,3.88e-46,161;CL:0000837,3.88e-46,161;CL:0000134,6.80e-21,354;CL:0002320,4.77e-20,361;CL:0000219,1.59e-18,386;CL:0002393,2.08e-17,9;CL:0002397,2.08e-17,9;CL:0000094,4.75e-17,8;CL:0000034,6.65e-15,441;CL:0000048,9.99e-15,427;CL:0000723,3.29e-14,433;CL:0000081,7.04e-12,11;CL:0000775,1.21e-07,3;CL:0000767,4.68e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-54;42!CL:0000049;2.97e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.61e-23!80;UBERON:0002390!7.88e-23!102;UBERON:0003061!7.88e-23!102;UBERON:0002193!1.17e-22!112;UBERON:0001474!3.63e-20!86;UBERON:0002405!6.91e-18!115;UBERON:0004765!2.75e-17!101;UBERON:0001434!2.75e-17!101;UBERON:0003081!5.11e-11!216;UBERON:0002204!2.93e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-54,76;UBERON:0001474,3.16e-49,82;UBERON:0002390,3.24e-46,98;UBERON:0003061,3.24e-46,98;UBERON:0004765,1.75e-43,90;UBERON:0002405,2.31e-43,93;UBERON:0002193,4.65e-42,108;UBERON:0001434,1.33e-37,100;UBERON:0003081,7.82e-20,203;UBERON:0002384,1.15e-19,371;UBERON:0002204,2.27e-18,167;UBERON:0000926,3.74e-09,315;UBERON:0004120,3.74e-09,315;UBERON:0006603,3.74e-09,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,6.68719270643137,4.60595277716655,9.59859964559671,0,0.6024118375565,0,0,0.142169232487422,1.17440175733939,13.2958898047651,14.8402891127905,9.33146744078163,0,0,0,4.79814187972564,1.51150377475524,4.85168122375632,6.27558399645349,4.11167888021826,4.33588919253145,6.32923263108731,6.14785695669842,6.85798466676897,11.0318617835718,5.80936215225443,4.06279459783025,9.03563229804502,2.45615535052061,5.39336362668203,7.65209730927256,4.49300637906531,7.03270838378945,6.59702600373432,5.58498241340569,8.52449501065388,8.70627715885752,7.37600792098482,5.60540024096017,8.29120595347253,3.65038042894141,8.47036494349955,9.6863920421339,8.83866326370155,10.1267963981083,4.01385043992689,4.25208599930087,5.03180749220102,4.04383072127382,3.45406853535464,3.2145117339416,6.84030584978997,3.9783335439818,3.47061892152804,0,0,0,1.28019066769952,0,1.14950487990897,0,0.954053754535364,12.5226853204079,11.7447437874188,8.02773779062981,2.64342657158052,6.72610275577843,0,3.73748563216283,2.75107533924415,1.85041349099558,0,0,0.473447805734733,0,0.891283655081389,0.589211814949674,0,0.270803863765016,0.896639238079726,1.1705341280389,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,3.42731463482045,5.34880391567015,3.33096128930438,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0,0.327447688744282,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0.953962497221368,2.85997455390064,1.11437250398869,0.79504962946682,0,0.694281003215189,0,0.838998872419812,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0.805658634218294,0,1.46437234528902,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.366403487860815,25.038279312852,15.511210565933,0,0,0,1.32409180813219,0.573673241497627,0,0,1.06748995729705,0.98667019366864,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0.751190294532984,0.226864366320042,0.538168907066586,0,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0.504867548488229,0.0920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0,0.193260853163297,0.818238361772504,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.435758888184812,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.577465791044295,0.462985512576611,0.570762456703795,0,0.858486162094873,0.738651018262192,0.702012795417713,0.297262324577456,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0.44024217006613,4.14656231081544,3.89123874225796,8.07951573928832,0.190493682876507,0,3.51652341630141,0,0.205654985406647,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,1.74306691720059,0.399891964728228,1.2162378064119,0,0,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0.716243852959582,0.112085143993527,3.74358444383662,2.58753089831421,5.90377966886842,0.254094624222463,0,0,0,0,27.7132598860457,8.97484377612075,35.639734155499,0,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,0,0.553107505625109,0.260650843404249,0,0,2.48121631347465,4.31428401637234,3.94891963872744,0.909382714338778,0,0.30239029332968,0.496215615637554,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0,0.232420756919918,0.241718899183244,1.20303882181971,0.184161977871793,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,0,0,0.650756789328606,0.309123034943167,0,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0.768760269460425,0.893288987462089,0.50578890427775,0,0.62962469366128,1.3940745403212,0,0.532306030317022,0.869932992075073,0.37064843820784,0,0,0.316379424718726,0,0.255897791311334,0,0.636406495851874,0,0.359744915166629,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,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|short_description=p3@SLC9A8 | |short_description=p3@SLC9A8 | ||
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Latest revision as of 20:06, 16 September 2015
Short description: | p3@SLC9A8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC9A8_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000417961, NM_015266, uc002xuv.1, uc010gib.1, uc010zyj.1, uc010zyk.1, uc010zyl.1, uc010zym.1_5end |
EntrezGene: | SLC9A8 |
HGNC: | 20728 |
UniProt: | Q9Y2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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bone marrow | 2.52e-54 | 76 |
bone element | 3.16e-49 | 82 |
hematopoietic system | 3.24e-46 | 98 |
blood island | 3.24e-46 | 98 |
skeletal element | 1.75e-43 | 90 |
immune system | 2.31e-43 | 93 |
hemolymphoid system | 4.65e-42 | 108 |
skeletal system | 1.33e-37 | 100 |
lateral plate mesoderm | 7.82e-20 | 203 |
connective tissue | 1.15e-19 | 371 |
musculoskeletal system | 2.27e-18 | 167 |
mesoderm | 3.74e-09 | 315 |
mesoderm-derived structure | 3.74e-09 | 315 |
presumptive mesoderm | 3.74e-09 | 315 |