FFCP PHASE1:Hg19::chr5:169695413..169695438,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:169695413..169695438,-
|short_description=p7@LCP2
|description=CAGE_peak_7_at_LCP2_5end
|association_with_transcript=47bp_to_uc010jjo.1_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3937 | |EntrezGene=3937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6529 | |HGNC=6529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_uc010jjo.1_5end | |||
|cluster_id=chr5:169695413..169695438,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_7_at_LCP2_5end | |||
|id=chr5:169695413..169695438,- | |||
|ontology_enrichment_celltype=CL:0000037!3.76e-62!172;CL:0000566!3.76e-62!172;CL:0002032!3.23e-60!165;CL:0000837!3.23e-60!165;CL:0000988!7.10e-60!182;CL:0000738!4.65e-54!140;CL:0000763!1.93e-53!112;CL:0000049!1.93e-53!112;CL:0000766!1.82e-50!76;CL:0002031!7.34e-49!124;CL:0002087!9.31e-49!119;CL:0000839!2.93e-46!70;CL:0000557!2.76e-45!71;CL:0002194!5.24e-43!63;CL:0000576!5.24e-43!63;CL:0000040!5.24e-43!63;CL:0000559!5.24e-43!63;CL:0002057!1.21e-42!42;CL:0002009!4.83e-41!65;CL:0000860!1.22e-38!45;CL:0000134!7.30e-12!358;CL:0002320!4.86e-11!365;CL:0000219!3.03e-08!390;CL:0000838!3.18e-08!52;CL:0000542!6.36e-08!53;CL:0000051!6.36e-08!53;CL:0000084!3.79e-07!25;CL:0000827!3.79e-07!25;CL:0002393!7.66e-07!9;CL:0002397!7.66e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-69;33!CL:0002057;1.60e-69;33!CL:0000473;1.09e-53;39!CL:0000234;1.09e-53;39!CL:0000576;1.50e-41;48!CL:0000766;2.46e-36;69!CL:0000763;9.23e-18;100!CL:0002087;4.05e-17;104!CL:0000738;2.36e-15;136!CL:0000097;9.34e-14;5!CL:0000775;2.34e-10;3!CL:0000988;4.23e-09;177!CL:0002393;1.47e-07;6!CL:0002397;1.47e-07;6!CL:0000163;1.70e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.42e-75,42;CL:0002057,6.42e-75,42;CL:0000473,1.86e-72,48;CL:0000234,1.86e-72,48;CL:0000766,3.21e-72,72;CL:0000839,4.33e-68,66;CL:0000557,6.43e-67,67;CL:0002194,3.95e-59,59;CL:0000576,3.95e-59,59;CL:0000040,3.95e-59,59;CL:0000559,3.95e-59,59;CL:0002009,6.96e-57,61;CL:0000738,1.27e-56,136;CL:0002031,7.04e-53,120;CL:0000763,4.20e-51,108;CL:0000049,4.20e-51,108;CL:0000037,8.42e-49,168;CL:0002087,1.15e-48,115;CL:0002032,1.90e-47,161;CL:0000837,1.90e-47,161;CL:0000988,1.30e-45,177;CL:0000134,9.30e-16,354;CL:0002320,3.52e-15,361;CL:0000097,5.76e-14,5;CL:0002028,5.76e-14,5;CL:0000219,3.81e-13,386;CL:0000048,1.14e-10,427;CL:0000775,2.49e-10,3;CL:0000723,2.50e-10,433;CL:0000034,6.88e-10,441;CL:0000163,1.32e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-55;42!CL:0000049;1.13e-14;108 | |||
|ontology_enrichment_disease=DOID:1240!3.17e-11!39;DOID:2531!8.78e-11!51;DOID:0060083!8.78e-11!51;DOID:8692!1.02e-10!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.88e-53!102;UBERON:0003061!5.88e-53!102;UBERON:0002193!2.52e-48!112;UBERON:0002371!3.30e-39!80;UBERON:0001474!6.86e-35!86;UBERON:0002405!3.35e-31!115;UBERON:0004765!1.96e-26!101;UBERON:0001434!1.96e-26!101;UBERON:0003081!3.44e-16!216;UBERON:0002204!2.08e-10!167;UBERON:0002384!2.66e-10!375;UBERON:0000178!7.93e-10!15;UBERON:0000179!7.93e-10!15;UBERON:0000463!7.93e-10!15;UBERON:0007023!3.84e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.22e-65,98;UBERON:0003061,3.22e-65,98;UBERON:0002193,4.98e-58,108;UBERON:0002371,9.62e-58,76;UBERON:0001474,9.82e-53,82;UBERON:0002405,2.09e-52,93;UBERON:0004765,4.37e-47,90;UBERON:0001434,2.75e-41,100;UBERON:0003081,6.12e-25,203;UBERON:0002204,2.44e-20,167;UBERON:0002384,2.16e-14,371;UBERON:0000926,1.23e-11,315;UBERON:0004120,1.23e-11,315;UBERON:0006603,1.23e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.492603536699674,0.550975469195755,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,1.10799081706375,6.41742231904453,2.17010870715852,0.223915474239924,1.29557466407592,0.515151135268373,3.34415949192999,5.29026321164333,4.12392904019288,3.25400651667958,4.52284676824008,3.40677007984614,9.49384894663097,15.1134816852169,3.54723344832878,5.17118521104928,7.74581620300591,6.77132432971709,7.15320890261898,7.09555990150399,2.24723484445085,14.6920268338033,3.53021929783703,14.0654167675789,9.56568770541477,18.7495838164334,7.6720455095885,16.8321358404579,10.7803192691317,10.5879782329248,18.8436498942557,16.6874533894464,5.86409880703815,4.84319602106695,6.99727508376373,3.16462387440884,0.845021145247767,1.06302149982522,0.209658645508376,0.44931452458598,0.300353785683013,0.48217676009124,0,0.79566670879636,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,1.14681968437569,0,0,0,1.180258620683,3.14408610199332,1.64481199199607,0.668745981562712,0,0,0,1.22551502573691,0.294605907474837,0.221533894583621,0.541607727530031,1.28091319725675,1.04047478047903,0.986627427622057,0.829050053357545,0.869409257205157,0.14828656316206,0.267540828089713,2.09071047609954,0.339928028092699,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,0.752875595388864,0.511946444617674,0,0.236777252044017,0,0,2.13952156626806,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0,0,0,0,0,1.47798971368783,4.0502279646084,3.52457796419313,1.72943944100354,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,4.21667878966063,0,0,0,0,0,0,1.12085143993527,0.985153801009636,1.94064817373566,1.15508732651774,0,0,0,0,0,13.4821264310493,35.899375104483,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,4.31428401637234,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,2.27858874869665,0.476463550915578,0.822724546172388,0,1.62009431171434,5.55187623405989,0,0,0,0,0,0,0.159426272728822,3.39284931435788,0,0.846694330895531,0.324621940274555,0.280797178113459,0.456469358066384,0.94007937463814,0,0.677167111206413,0.481764225311099,0.201799707191048,0.425846237690326,0,0.307240764308458,0.447352215784832,0.333698283423817,0.586164286206121,1.11362469558097,0,1.08182271390393,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0.398495976502139,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0.470940769185074,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0.635746315921515,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0.788662062837943,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.82092520749339,0,0,0.293104467356165,0,0.129282956361551,0.26446520348538,0,0,0.533937062838473,0.157204305099666,0.828478110694391,0.496166021811951,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0.59996218756479,0.106691729694141,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.345701962667338,0,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.490296643507811,0,0.196308467114945,0,0,0,0.281951753939561,0.515663103788617,0,0,0,0,0,1.37618785021362,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,1.67931165573616,1.05527014302958,0,0,0.202117188958219,0,0,0.26940821205835,0.0717222053926763,0,0,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|short_description=p7@LCP2 | |||
}} | }} |
Latest revision as of 21:08, 16 September 2015
Short description: | p7@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LCP2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 47bp_to_uc010jjo.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.22e-65 | 98 |
blood island | 3.22e-65 | 98 |
hemolymphoid system | 4.98e-58 | 108 |
bone marrow | 9.62e-58 | 76 |
bone element | 9.82e-53 | 82 |
immune system | 2.09e-52 | 93 |
skeletal element | 4.37e-47 | 90 |
skeletal system | 2.75e-41 | 100 |
lateral plate mesoderm | 6.12e-25 | 203 |
musculoskeletal system | 2.44e-20 | 167 |
connective tissue | 2.16e-14 | 371 |
mesoderm | 1.23e-11 | 315 |
mesoderm-derived structure | 1.23e-11 | 315 |
presumptive mesoderm | 1.23e-11 | 315 |