FFCP PHASE1:Hg19::chr10:125853048..125853095,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51363 | |EntrezGene=51363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18137 | |HGNC=18137 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000462406_5end | |association_with_transcript=2bp_to_ENST00000462406_5end | ||
|cluster_id=chr10:125853048..125853095,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_CHST15_5end | |description=CAGE_peak_2_at_CHST15_5end | ||
|id=chr10:125853048..125853095,- | |id=chr10:125853048..125853095,- | ||
|ontology_enrichment_celltype=CL:0002057!1.01e-26!42;CL:0000860!4.75e-24!45;CL:0000766!1.42e-18!76;CL:0002194!1.62e-17!63;CL:0000576!1.62e-17!63;CL:0000040!1.62e-17!63;CL:0000559!1.62e-17!63;CL:0002009!5.12e-17!65;CL:0000557!2.15e-13!71;CL:0000839!4.93e-13!70;CL:0000066!1.93e-12!254;CL:0002078!7.13e-08!44;CL:0000115!6.39e-07!35 | |ontology_enrichment_celltype=CL:0002057!1.01e-26!42;CL:0000860!4.75e-24!45;CL:0000766!1.42e-18!76;CL:0002194!1.62e-17!63;CL:0000576!1.62e-17!63;CL:0000040!1.62e-17!63;CL:0000559!1.62e-17!63;CL:0002009!5.12e-17!65;CL:0000557!2.15e-13!71;CL:0000839!4.93e-13!70;CL:0000066!1.93e-12!254;CL:0002078!7.13e-08!44;CL:0000115!6.39e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.74e-20;33!CL:0002057;2.74e-20;33!CL:0000473;1.13e-17;39!CL:0000234;1.13e-17;39!CL:0000576;3.09e-14;48!CL:0000766;2.49e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.01e-27,48;CL:0000234,1.01e-27,48;CL:0000860,4.41e-27,42;CL:0002057,4.41e-27,42;CL:0000766,1.53e-20,72;CL:0002194,2.42e-20,59;CL:0000576,2.42e-20,59;CL:0000040,2.42e-20,59;CL:0000559,2.42e-20,59;CL:0002009,1.26e-19,61;CL:0000557,5.96e-15,67;CL:0000839,1.02e-14,66;CL:0000066,9.34e-13,253;CL:0002078,3.68e-08,45;CL:0000115,2.54e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;9.51e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!5.18e-26!625;UBERON:0000480!6.07e-26!626;UBERON:0000468!9.53e-24!659;UBERON:0002050!2.74e-23!605;UBERON:0005423!2.74e-23!605;UBERON:0000922!4.13e-23!612;UBERON:0000923!4.36e-23!604;UBERON:0005291!4.36e-23!604;UBERON:0006598!4.36e-23!604;UBERON:0002532!4.36e-23!604;UBERON:0000062!1.29e-20!511;UBERON:0002193!8.15e-14!112;UBERON:0002405!1.21e-12!115;UBERON:0004765!1.44e-12!101;UBERON:0001434!1.44e-12!101;UBERON:0002390!1.80e-12!102;UBERON:0003061!1.80e-12!102;UBERON:0002371!3.26e-12!80;UBERON:0000926!2.72e-11!448;UBERON:0004120!2.72e-11!448;UBERON:0006603!2.72e-11!448;UBERON:0001474!4.65e-10!86;UBERON:0003081!7.87e-08!216;UBERON:0000477!6.51e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.56e-22,592;UBERON:0005423,8.51e-22,581;UBERON:0002050,5.34e-19,564;UBERON:0000923,1.73e-17,560;UBERON:0010316,1.73e-17,560;UBERON:0005291,1.73e-17,560;UBERON:0006598,1.73e-17,560;UBERON:0010317,1.73e-17,560;UBERON:0002532,1.73e-17,560;UBERON:0002193,6.92e-15,108;UBERON:0001434,1.35e-13,100;UBERON:0002390,1.63e-13,98;UBERON:0003061,1.63e-13,98;UBERON:0002371,2.45e-13,76;UBERON:0002405,5.30e-13,93;UBERON:0004765,1.56e-12,90;UBERON:0001474,3.59e-11,82;UBERON:0003081,5.30e-07,203 | |||
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| ||
|short_description=p2@CHST15 | |short_description=p2@CHST15 | ||
}} | }} |
Latest revision as of 21:48, 16 September 2015
Short description: | p2@CHST15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHST15_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 2bp_to_ENST00000462406_5end |
EntrezGene: | CHST15 |
HGNC: | 18137 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.01e-27 | 48 |
phagocyte | 1.01e-27 | 48 |
classical monocyte | 4.41e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.41e-27 | 42 |
myeloid leukocyte | 1.53e-20 | 72 |
monopoietic cell | 2.42e-20 | 59 |
monocyte | 2.42e-20 | 59 |
monoblast | 2.42e-20 | 59 |
promonocyte | 2.42e-20 | 59 |
macrophage dendritic cell progenitor | 1.26e-19 | 61 |
granulocyte monocyte progenitor cell | 5.96e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.02e-14 | 66 |
epithelial cell | 9.34e-13 | 253 |
meso-epithelial cell | 3.68e-08 | 45 |
endothelial cell | 2.54e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
embryo | 3.56e-22 | 592 |
developing anatomical structure | 8.51e-22 | 581 |
embryonic structure | 5.34e-19 | 564 |
germ layer | 1.73e-17 | 560 |
germ layer / neural crest | 1.73e-17 | 560 |
embryonic tissue | 1.73e-17 | 560 |
presumptive structure | 1.73e-17 | 560 |
germ layer / neural crest derived structure | 1.73e-17 | 560 |
epiblast (generic) | 1.73e-17 | 560 |
hemolymphoid system | 6.92e-15 | 108 |
skeletal system | 1.35e-13 | 100 |
hematopoietic system | 1.63e-13 | 98 |
blood island | 1.63e-13 | 98 |
bone marrow | 2.45e-13 | 76 |
immune system | 5.30e-13 | 93 |
skeletal element | 1.56e-12 | 90 |
bone element | 3.59e-11 | 82 |
lateral plate mesoderm | 5.30e-07 | 203 |