FFCP PHASE1:Hg19::chr5:169758393..169758440,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000436248,ENST00000518357,ENST00000521471,NR_026945,uc011deu.1_5end | |||
|cluster_id=chr5:169758393..169758440,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_LOC257358_5end | |||
|id=chr5:169758393..169758440,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.77e-36!182;CL:0002032!6.41e-36!165;CL:0000837!6.41e-36!165;CL:0000037!2.81e-35!172;CL:0000566!2.81e-35!172;CL:0000763!4.49e-27!112;CL:0000049!4.49e-27!112;CL:0002057!1.25e-26!42;CL:0000738!4.39e-26!140;CL:0002031!1.01e-24!124;CL:0000860!1.10e-23!45;CL:0002087!4.70e-23!119;CL:0000766!4.27e-21!76;CL:0000839!1.53e-18!70;CL:0000557!7.39e-16!71;CL:0002194!2.71e-15!63;CL:0000576!2.71e-15!63;CL:0000040!2.71e-15!63;CL:0000559!2.71e-15!63;CL:0002009!2.47e-14!65;CL:0000219!5.16e-09!390;CL:0000134!1.47e-08!358;CL:0002320!2.18e-08!365;CL:0000542!2.78e-08!53;CL:0000051!2.78e-08!53;CL:0000838!8.06e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-62;33!CL:0002057;1.15e-62;33!CL:0000473;1.06e-42;39!CL:0000234;1.06e-42;39!CL:0000576;5.46e-31;48!CL:0000766;2.13e-22;69!CL:0000763;4.48e-20;100!CL:0000738;1.16e-09;136!CL:0002087;8.23e-09;104!CL:0000097;4.20e-08;5!CL:0000988;2.02e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.55e-59,42;CL:0002057,1.55e-59,42;CL:0000763,2.83e-56,108;CL:0000049,2.83e-56,108;CL:0000473,6.88e-51,48;CL:0000234,6.88e-51,48;CL:0000766,9.05e-50,72;CL:0000839,6.69e-49,66;CL:0002032,1.34e-45,161;CL:0000837,1.34e-45,161;CL:0000557,2.15e-45,67;CL:0000037,4.46e-43,168;CL:0002194,1.97e-41,59;CL:0000576,1.97e-41,59;CL:0000040,1.97e-41,59;CL:0000559,1.97e-41,59;CL:0000988,3.97e-40,177;CL:0002009,8.83e-40,61;CL:0002031,7.40e-34,120;CL:0000738,5.85e-32,136;CL:0002087,2.97e-27,115;CL:0000219,3.03e-15,386;CL:0000134,7.62e-15,354;CL:0002320,2.90e-14,361;CL:0000048,9.50e-10,427;CL:0000723,2.07e-09,433;CL:0000034,5.67e-09,441;CL:0000097,2.68e-08,5;CL:0002028,2.68e-08,5;CL:0000771,9.59e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-43;42!CL:0000049;3.00e-15;108 | |||
|ontology_enrichment_disease=DOID:2531!4.18e-10!51;DOID:0060083!4.18e-10!51;DOID:1240!2.08e-09!39;DOID:1036!4.33e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.44e-14;8!DOID:8692;8.29e-09;31!DOID:1240;1.28e-08;39!DOID:2531;1.73e-07;51!DOID:0060083;1.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.09e-14,8;DOID:2531,8.47e-12,51;DOID:0060083,8.47e-12,51;DOID:1240,2.94e-11,39;DOID:8692,5.07e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.88e-18!102;UBERON:0003061!7.88e-18!102;UBERON:0002193!1.02e-15!112;UBERON:0002371!6.85e-14!80;UBERON:0001474!4.31e-13!86;UBERON:0002405!9.30e-10!115;UBERON:0004765!4.05e-09!101;UBERON:0001434!4.05e-09!101;UBERON:0002384!5.49e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.71e-41,76;UBERON:0001474,2.17e-37,82;UBERON:0002405,9.15e-36,93;UBERON:0002390,2.19e-33,98;UBERON:0003061,2.19e-33,98;UBERON:0004765,3.79e-33,90;UBERON:0002193,2.73e-29,108;UBERON:0001434,8.49e-29,100;UBERON:0002384,3.49e-14,371;UBERON:0002204,3.32e-13,167;UBERON:0003081,1.05e-10,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.382067028739756,0.0821005894499457,0.472264687882075,0.786728553697808,0.767658796194425,0.928896739896456,0,0,0,0,0.142169232487422,0.587200878669695,3.87796785972314,1.20326668482085,0.434021741431704,0.223915474239924,0.32389366601898,0,1.16318591023652,2.64513160582167,1.21292030593908,3.71886459049095,3.28934310417461,4.02618282163635,14.9600044007518,12.2957139133968,15.1348627128695,9.65287906062532,5.80936215225443,5.41705946377367,4.51781614902251,2.72906150057846,5.61808711112712,6.12167784741805,3.53021929783703,4.47535988059329,1.9791078011203,4.58766412529753,2.13112375266347,3.77272010217159,2.26954089876456,4.9825779919646,9.54744927975624,10.9511412868242,17.1579187317042,1.81619850790011,5.89244217580104,11.076183560431,0.422510572623884,0,0,0.112328631146495,0,0,0.855038231223746,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0.800791974072025,0,1.32208974556972,1.90810750907073,0,0,0,0,0,0.790152254325231,0,0,0.616804496998528,0,0,0,0,0.668462741311041,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.328875809207352,0,0.869409257205157,0.296573126324121,0.535081656179426,0,0.453237370790265,0.383220493601921,0.34362744548263,0,0.95569624297229,0.651083453856419,0,0.150575119077773,0.76791966692651,0,0.473554504088034,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.835979866147242,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,3.9534125230819,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,2.55340458638356,1.86595303986695,1.29707958075265,1.76739406796932,2.60341366597893,2.29193055334967,2.34434894420094,0,1.02827492703324,0.901029173531752,0.571652865261156,0.560655421726804,0.87192013766656,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,2.99602809578873,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0.877039506583738,1.3071772551245,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0.929015875628594,0.432807638929335,4.69536166099533,8.44959245462758,0.798317485731266,0,0,0,0.280797178113459,0.456469358066384,1.09675927041116,0,1.18504244461122,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0,0,0.781552381608161,9.46580991243824,1.23087398947712,6.49093628342359,0,0,0,1.02555725490326,0,0.222886768554957,0,0,0,0,0,0,0,0.988823245360557,0,0.398495976502139,0,0,0.715880777515084,0.246169610922139,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0.538651809526579,0,0,0,0,0,0,0,7.15353087370155,0.156980256395025,1.99454018280188,1.35357396370308,1.37243774022418,1.51039428278258,1.89753732724185,1.74830236878417,0,0,0,0,0,0.265372693510018,0,0.593042257361244,0.247127877893006,0.104421949505455,0.067401132980677,0.802577647298789,0,0,1.17398771359254,0,0,1.20990716048664,0,0,2.70582154946087,0.414752765588989,0,0.992975867626496,2.19753042885058,0,0,0.277349346026277,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0.411125773940253,1.78843150532691,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,3.97964660709187,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,1.31348033198942,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0,0.414239055347196,0,0.197611631897944,0.121792598380896,0,0,1.0027595760908,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0.124192805882767,0,0,0.606596470166591,1.42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| |||
|short_description=p1@LOC257358 | |||
}} |
Latest revision as of 21:54, 16 September 2015
Short description: | p1@LOC257358 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC257358_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000436248, ENST00000518357, ENST00000521471, NR_026945, uc011deu.1_5end |
EntrezGene: | LOC257358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.55e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-59 | 42 |
myeloid cell | 2.83e-56 | 108 |
common myeloid progenitor | 2.83e-56 | 108 |
defensive cell | 6.88e-51 | 48 |
phagocyte | 6.88e-51 | 48 |
myeloid leukocyte | 9.05e-50 | 72 |
myeloid lineage restricted progenitor cell | 6.69e-49 | 66 |
hematopoietic oligopotent progenitor cell | 1.34e-45 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-45 | 161 |
granulocyte monocyte progenitor cell | 2.15e-45 | 67 |
hematopoietic stem cell | 4.46e-43 | 168 |
monopoietic cell | 1.97e-41 | 59 |
monocyte | 1.97e-41 | 59 |
monoblast | 1.97e-41 | 59 |
promonocyte | 1.97e-41 | 59 |
hematopoietic cell | 3.97e-40 | 177 |
macrophage dendritic cell progenitor | 8.83e-40 | 61 |
hematopoietic lineage restricted progenitor cell | 7.40e-34 | 120 |
leukocyte | 5.85e-32 | 136 |
nongranular leukocyte | 2.97e-27 | 115 |
motile cell | 3.03e-15 | 386 |
mesenchymal cell | 7.62e-15 | 354 |
connective tissue cell | 2.90e-14 | 361 |
multi fate stem cell | 9.50e-10 | 427 |
somatic stem cell | 2.07e-09 | 433 |
stem cell | 5.67e-09 | 441 |
mast cell | 2.68e-08 | 5 |
basophil mast progenitor cell | 2.68e-08 | 5 |
eosinophil | 9.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.71e-41 | 76 |
bone element | 2.17e-37 | 82 |
immune system | 9.15e-36 | 93 |
hematopoietic system | 2.19e-33 | 98 |
blood island | 2.19e-33 | 98 |
skeletal element | 3.79e-33 | 90 |
hemolymphoid system | 2.73e-29 | 108 |
skeletal system | 8.49e-29 | 100 |
connective tissue | 3.49e-14 | 371 |
musculoskeletal system | 3.32e-13 | 167 |
lateral plate mesoderm | 1.05e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.09e-14 | 8 |
hematologic cancer | 8.47e-12 | 51 |
immune system cancer | 8.47e-12 | 51 |
leukemia | 2.94e-11 | 39 |
myeloid leukemia | 5.07e-09 | 31 |