FFCP PHASE1:Hg19::chr5:169760454..169760465,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:169760454..169760465,+ to FFCP PHASE1:Hg19::chr5:169760454..169760465,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=257358 | |EntrezGene=257358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_BC093717,BC111994_5end | |||
|cluster_id=chr5:169760454..169760465,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_11_at_LOC257358_5end | |||
|id=chr5:169760454..169760465,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.72e-97!42;CL:0000860!1.48e-90!45;CL:0000766!2.04e-79!76;CL:0002194!7.65e-71!63;CL:0000576!7.65e-71!63;CL:0000040!7.65e-71!63;CL:0000559!7.65e-71!63;CL:0002009!1.72e-68!65;CL:0000839!3.47e-63!70;CL:0000557!3.25e-62!71;CL:0000738!5.41e-53!140;CL:0000763!8.59e-52!112;CL:0000049!8.59e-52!112;CL:0002087!1.51e-47!119;CL:0002031!1.03e-42!124;CL:0000037!8.49e-42!172;CL:0000566!8.49e-42!172;CL:0002032!1.45e-41!165;CL:0000837!1.45e-41!165;CL:0000988!4.23e-39!182;CL:0000134!3.84e-16!358;CL:0002320!1.11e-15!365;CL:0000094!1.58e-15!8;CL:0000219!4.61e-14!390;CL:0000048!4.03e-12!430;CL:0000723!7.62e-12!436;CL:0000034!1.73e-11!444;CL:0000771!1.91e-11!2;CL:0000081!3.23e-11!11;CL:0000775!1.26e-07!3;CL:0000063!6.07e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.01e-58;33!CL:0002057;5.01e-58;33!CL:0000473;7.83e-47;39!CL:0000234;7.83e-47;39!CL:0000576;1.23e-31;48!CL:0000766;9.05e-23;69!CL:0000771;1.53e-20;2!CL:0000763;4.41e-14;100!CL:0000094;1.45e-11;8!CL:0002087;5.79e-11;104!CL:0000081;1.51e-08;11!CL:0002393;3.68e-07;6!CL:0002397;3.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.39e-62,42;CL:0002057,2.39e-62,42;CL:0000473,6.33e-61,48;CL:0000234,6.33e-61,48;CL:0000766,1.89e-54,72;CL:0002194,3.03e-48,59;CL:0000576,3.03e-48,59;CL:0000040,3.03e-48,59;CL:0000559,3.03e-48,59;CL:0002009,1.31e-46,61;CL:0000839,6.08e-43,66;CL:0000557,2.84e-42,67;CL:0000763,1.35e-35,108;CL:0000049,1.35e-35,108;CL:0000738,9.17e-28,136;CL:0002087,1.05e-23,115;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0002031,1.29e-22,120;CL:0000037,5.58e-22,168;CL:0000988,1.00e-20,177;CL:0000771,1.26e-20,2;CL:0000094,1.26e-11,8;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000081,1.36e-08,11;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-41;42!CL:0000049;1.43e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.53e-54!80;UBERON:0001474!2.62e-50!86;UBERON:0002390!3.01e-44!102;UBERON:0003061!3.01e-44!102;UBERON:0004765!6.70e-42!101;UBERON:0001434!6.70e-42!101;UBERON:0002193!1.03e-39!112;UBERON:0002405!5.18e-36!115;UBERON:0002204!1.00e-22!167;UBERON:0003081!2.66e-17!216;UBERON:0002384!4.68e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.91e-37,76;UBERON:0001474,3.58e-34,82;UBERON:0004765,6.10e-31,90;UBERON:0002405,7.18e-30,93;UBERON:0002390,3.14e-28,98;UBERON:0003061,3.14e-28,98;UBERON:0001434,1.28e-27,100;UBERON:0002193,2.13e-25,108;UBERON:0002204,1.58e-15,167;UBERON:0003081,2.71e-12,203;UBERON:0002384,2.34e-08,371;UBERON:0000926,6.61e-07,315;UBERON:0004120,6.61e-07,315;UBERON:0006603,6.61e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.10799081706375,1.80490002723128,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,2.58923153089935,1.5369642391746,4.96612682766029,1.72372840368309,1.29096936716765,0,0.188242339542605,0.545812300115692,0.449446968890169,3.06083892370903,2.24650318953266,3.19668562899521,0.329851300186716,1.39624560335142,1.27867425159808,1.45104619314292,0,1.86846674698672,0.75374599577023,1.0429658368404,2.38907729175628,0.605399502633369,0.368277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.10799081706375,1.80490002723128,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,2.58923153089935,1.5369642391746,4.96612682766029,1.72372840368309,1.29096936716765,0,0.188242339542605,0.545812300115692,0.449446968890169,3.06083892370903,2.24650318953266,3.19668562899521,0.329851300186716,1.39624560335142,1.27867425159808,1.45104619314292,0,1.86846674698672,0.75374599577023,1.0429658368404,2.38907729175628,0.605399502633369,0.368277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@LOC257358 | |||
}} | }} |
Latest revision as of 21:59, 16 September 2015
Short description: | p11@LOC257358 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LOC257358_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 64bp_to_BC093717, BC111994_5end |
EntrezGene: | LOC257358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.39e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.39e-62 | 42 |
defensive cell | 6.33e-61 | 48 |
phagocyte | 6.33e-61 | 48 |
myeloid leukocyte | 1.89e-54 | 72 |
monopoietic cell | 3.03e-48 | 59 |
monocyte | 3.03e-48 | 59 |
monoblast | 3.03e-48 | 59 |
promonocyte | 3.03e-48 | 59 |
macrophage dendritic cell progenitor | 1.31e-46 | 61 |
myeloid lineage restricted progenitor cell | 6.08e-43 | 66 |
granulocyte monocyte progenitor cell | 2.84e-42 | 67 |
myeloid cell | 1.35e-35 | 108 |
common myeloid progenitor | 1.35e-35 | 108 |
leukocyte | 9.17e-28 | 136 |
nongranular leukocyte | 1.05e-23 | 115 |
hematopoietic oligopotent progenitor cell | 4.74e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 1.29e-22 | 120 |
hematopoietic stem cell | 5.58e-22 | 168 |
hematopoietic cell | 1.00e-20 | 177 |
eosinophil | 1.26e-20 | 2 |
granulocyte | 1.26e-11 | 8 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
blood cell | 1.36e-08 | 11 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.91e-37 | 76 |
bone element | 3.58e-34 | 82 |
skeletal element | 6.10e-31 | 90 |
immune system | 7.18e-30 | 93 |
hematopoietic system | 3.14e-28 | 98 |
blood island | 3.14e-28 | 98 |
skeletal system | 1.28e-27 | 100 |
hemolymphoid system | 2.13e-25 | 108 |
musculoskeletal system | 1.58e-15 | 167 |
lateral plate mesoderm | 2.71e-12 | 203 |
connective tissue | 2.34e-08 | 371 |
mesoderm | 6.61e-07 | 315 |
mesoderm-derived structure | 6.61e-07 | 315 |
presumptive mesoderm | 6.61e-07 | 315 |