FFCP PHASE1:Hg19::chr5:169760548..169760567,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=158bp_to_BC093717,BC111994_5end | |||
|cluster_id=chr5:169760548..169760567,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_LOC257358_5end | |||
|id=chr5:169760548..169760567,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.54e-95!42;CL:0000860!2.75e-88!45;CL:0000766!4.88e-81!76;CL:0002194!1.11e-67!63;CL:0000576!1.11e-67!63;CL:0000040!1.11e-67!63;CL:0000559!1.11e-67!63;CL:0002009!2.26e-65!65;CL:0000839!9.52e-64!70;CL:0000557!9.66e-63!71;CL:0000763!1.28e-60!112;CL:0000049!1.28e-60!112;CL:0000738!5.16e-49!140;CL:0000037!3.95e-44!172;CL:0000566!3.95e-44!172;CL:0002032!4.13e-42!165;CL:0000837!4.13e-42!165;CL:0000988!3.64e-41!182;CL:0002087!7.34e-41!119;CL:0002031!1.41e-36!124;CL:0000094!9.44e-17!8;CL:0000134!5.97e-16!358;CL:0002320!1.90e-15!365;CL:0000219!1.14e-13!390;CL:0000081!5.20e-12!11;CL:0000767!9.05e-12!3;CL:0000034!1.13e-11!444;CL:0000048!1.52e-11!430;CL:0000723!3.06e-11!436;CL:0002393!1.94e-10!9;CL:0002397!1.94e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-84;33!CL:0002057;2.61e-84;33!CL:0000473;1.29e-64;39!CL:0000234;1.29e-64;39!CL:0000576;1.72e-43;48!CL:0000766;4.39e-29;69!CL:0000763;7.02e-14;100!CL:0002087;7.39e-13;104!CL:0000738;2.56e-08;136!CL:0000219;6.20e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.69e-86,42;CL:0002057,1.69e-86,42;CL:0000473,5.81e-82,48;CL:0000234,5.81e-82,48;CL:0002194,2.13e-70,59;CL:0000576,2.13e-70,59;CL:0000040,2.13e-70,59;CL:0000559,2.13e-70,59;CL:0002009,5.36e-68,61;CL:0000766,3.13e-67,72;CL:0000839,1.28e-62,66;CL:0000557,1.22e-61,67;CL:0000763,1.21e-43,108;CL:0000049,1.21e-43,108;CL:0002087,2.05e-34,115;CL:0000738,7.52e-34,136;CL:0002031,8.10e-33,120;CL:0002032,5.87e-28,161;CL:0000837,5.87e-28,161;CL:0000037,1.28e-26,168;CL:0000988,4.73e-25,177;CL:0000134,2.67e-10,354;CL:0002320,5.21e-10,361;CL:0000219,5.48e-09,386;CL:0000034,3.28e-08,441;CL:0000048,9.83e-08,427;CL:0000723,1.47e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.85e-57;42!CL:0000049;4.70e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.39e-55!80;UBERON:0001474!2.01e-50!86;UBERON:0002390!1.87e-46!102;UBERON:0003061!1.87e-46!102;UBERON:0002193!6.26e-44!112;UBERON:0004765!9.99e-42!101;UBERON:0001434!9.99e-42!101;UBERON:0002405!8.08e-38!115;UBERON:0002204!6.28e-22!167;UBERON:0003081!2.46e-17!216;UBERON:0002384!9.27e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.90e-54,76;UBERON:0001474,9.31e-50,82;UBERON:0004765,5.10e-45,90;UBERON:0002405,1.89e-43,93;UBERON:0002390,4.81e-41,98;UBERON:0003061,4.81e-41,98;UBERON:0001434,3.78e-40,100;UBERON:0002193,6.78e-37,108;UBERON:0002204,1.93e-22,167;UBERON:0003081,1.03e-17,203;UBERON:0000926,7.51e-10,315;UBERON:0004120,7.51e-10,315;UBERON:0006603,7.51e-10,315;UBERON:0002384,1.30e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0,2.76997704265939,1.60435557976113,0.868043482863407,0,0,0,0.290796477559129,0.377875943688809,0,0,0.411167888021826,3.09706370895104,3.45230870786581,3.33008918487831,15.6078271726466,1.03423704220986,3.22742341791913,2.70852973188684,0.564727018627814,0.272906150057846,1.79778787556068,3.67300670845083,8.98601275813062,7.03270838378945,0.329851300186716,2.79249120670285,4.26224750532694,6.09439401120026,3.40431134814684,6.85104473895132,2.26123798731069,4.17186334736161,8.47036494349955,0.605399502633369,8.83866326370155,14.5572698222807,0,0.212604299965044,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@LOC257358 | |||
}} |
Latest revision as of 22:01, 16 September 2015
Short description: | p4@LOC257358 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC257358_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 158bp_to_BC093717, BC111994_5end |
EntrezGene: | LOC257358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.69e-86 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-86 | 42 |
defensive cell | 5.81e-82 | 48 |
phagocyte | 5.81e-82 | 48 |
monopoietic cell | 2.13e-70 | 59 |
monocyte | 2.13e-70 | 59 |
monoblast | 2.13e-70 | 59 |
promonocyte | 2.13e-70 | 59 |
macrophage dendritic cell progenitor | 5.36e-68 | 61 |
myeloid leukocyte | 3.13e-67 | 72 |
myeloid lineage restricted progenitor cell | 1.28e-62 | 66 |
granulocyte monocyte progenitor cell | 1.22e-61 | 67 |
myeloid cell | 1.21e-43 | 108 |
common myeloid progenitor | 1.21e-43 | 108 |
nongranular leukocyte | 2.05e-34 | 115 |
leukocyte | 7.52e-34 | 136 |
hematopoietic lineage restricted progenitor cell | 8.10e-33 | 120 |
hematopoietic oligopotent progenitor cell | 5.87e-28 | 161 |
hematopoietic multipotent progenitor cell | 5.87e-28 | 161 |
hematopoietic stem cell | 1.28e-26 | 168 |
hematopoietic cell | 4.73e-25 | 177 |
mesenchymal cell | 2.67e-10 | 354 |
connective tissue cell | 5.21e-10 | 361 |
motile cell | 5.48e-09 | 386 |
stem cell | 3.28e-08 | 441 |
multi fate stem cell | 9.83e-08 | 427 |
somatic stem cell | 1.47e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.90e-54 | 76 |
bone element | 9.31e-50 | 82 |
skeletal element | 5.10e-45 | 90 |
immune system | 1.89e-43 | 93 |
hematopoietic system | 4.81e-41 | 98 |
blood island | 4.81e-41 | 98 |
skeletal system | 3.78e-40 | 100 |
hemolymphoid system | 6.78e-37 | 108 |
musculoskeletal system | 1.93e-22 | 167 |
lateral plate mesoderm | 1.03e-17 | 203 |
mesoderm | 7.51e-10 | 315 |
mesoderm-derived structure | 7.51e-10 | 315 |
presumptive mesoderm | 7.51e-10 | 315 |
connective tissue | 1.30e-09 | 371 |