FFCP PHASE1:Hg19::chr5:169760591..169760600,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:169760591..169760600,+ to FFCP PHASE1:Hg19::chr5:169760591..169760600,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=257358 | |EntrezGene=257358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=201bp_to_BC093717,BC111994_5end | |||
|cluster_id=chr5:169760591..169760600,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_7_at_LOC257358_5end | |||
|id=chr5:169760591..169760600,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.19e-100!42;CL:0000860!3.11e-93!45;CL:0000766!2.21e-71!76;CL:0002194!1.69e-63!63;CL:0000576!1.69e-63!63;CL:0000040!1.69e-63!63;CL:0000559!1.69e-63!63;CL:0002009!2.30e-61!65;CL:0000839!1.49e-56!70;CL:0000557!1.14e-55!71;CL:0000763!3.14e-46!112;CL:0000049!3.14e-46!112;CL:0000738!5.40e-45!140;CL:0002087!4.77e-40!119;CL:0000988!9.21e-37!182;CL:0000037!3.34e-35!172;CL:0000566!3.34e-35!172;CL:0002031!2.97e-31!124;CL:0002032!6.11e-31!165;CL:0000837!6.11e-31!165;CL:0000080!7.08e-18!6;CL:0000081!1.41e-14!11;CL:0000094!1.89e-14!8;CL:0000134!1.02e-13!358;CL:0000842!1.08e-13!3;CL:0002320!2.69e-13!365;CL:0000219!8.24e-12!390;CL:0000771!5.28e-11!2;CL:0000224!2.13e-10!4;CL:0000034!2.88e-10!444;CL:0000048!4.96e-10!430;CL:0000723!8.89e-10!436;CL:0002393!2.80e-08!9;CL:0002397!2.80e-08!9;CL:0000767!9.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.29e-82;33!CL:0002057;2.29e-82;33!CL:0000473;6.67e-57;39!CL:0000234;6.67e-57;39!CL:0000576;1.05e-46;48!CL:0000766;6.60e-25;69!CL:0000771;1.16e-17;2!CL:0000763;2.05e-17;100!CL:0002087;5.50e-13;104!CL:0000738;1.97e-10;136!CL:0000094;1.04e-09;8!CL:0000081;3.46e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.47e-88,42;CL:0002057,3.47e-88,42;CL:0000473,9.49e-77,48;CL:0000234,9.49e-77,48;CL:0000766,1.06e-64,72;CL:0002194,9.95e-61,59;CL:0000576,9.95e-61,59;CL:0000040,9.95e-61,59;CL:0000559,9.95e-61,59;CL:0002009,1.16e-58,61;CL:0000839,4.98e-54,66;CL:0000557,3.48e-53,67;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0000738,8.11e-33,136;CL:0002087,9.77e-30,115;CL:0002031,2.32e-28,120;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0000771,1.16e-17,2;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000094,9.96e-10,8;CL:0000219,4.58e-09,386;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441;CL:0000081,3.36e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.82e-58;42!CL:0000049;5.34e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.13e-51!102;UBERON:0003061!8.13e-51!102;UBERON:0002371!1.04e-48!80;UBERON:0002193!1.20e-45!112;UBERON:0001474!7.19e-45!86;UBERON:0004765!3.04e-37!101;UBERON:0001434!3.04e-37!101;UBERON:0002405!3.49e-34!115;UBERON:0003081!4.20e-20!216;UBERON:0002204!7.28e-20!167;UBERON:0002384!1.01e-12!375;UBERON:0000178!5.02e-07!15;UBERON:0000179!5.02e-07!15;UBERON:0000463!5.02e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-46,76;UBERON:0001474,5.94e-43,82;UBERON:0004765,7.16e-39,90;UBERON:0002405,1.61e-37,93;UBERON:0002390,1.90e-35,98;UBERON:0003061,1.90e-35,98;UBERON:0001434,1.12e-34,100;UBERON:0002193,7.13e-32,108;UBERON:0002204,2.04e-19,167;UBERON:0003081,2.43e-15,203;UBERON:0002384,1.15e-09,371;UBERON:0000926,1.47e-08,315;UBERON:0004120,1.47e-08,315;UBERON:0006603,1.47e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,2.76997704265939,1.20326668482085,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0.929119112685311,2.3015391385772,4.35473201099471,13.4794871036494,0.689491361473237,1.29096936716765,2.70852973188684,0.188242339542605,1.09162460023138,0.898893937780338,3.06083892370903,3.85114832491312,4.47535988059329,1.64925650093358,3.39088217956774,4.26224750532694,2.32167390902867,1.13477044938228,4.35975574296902,2.76373531782418,2.08593167368081,9.33912032232002,0.605399502633369,4.05105399586321,8.86094684834476,0,0.850417199860174,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,2.76997704265939,1.20326668482085,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0.929119112685311,2.3015391385772,4.35473201099471,13.4794871036494,0.689491361473237,1.29096936716765,2.70852973188684,0.188242339542605,1.09162460023138,0.898893937780338,3.06083892370903,3.85114832491312,4.47535988059329,1.64925650093358,3.39088217956774,4.26224750532694,2.32167390902867,1.13477044938228,4.35975574296902,2.76373531782418,2.08593167368081,9.33912032232002,0.605399502633369,4.05105399586321,8.86094684834476,0,0.850417199860174,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@LOC257358 | |||
}} | }} |
Latest revision as of 22:02, 16 September 2015
Short description: | p7@LOC257358 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LOC257358_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 201bp_to_BC093717, BC111994_5end |
EntrezGene: | LOC257358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.47e-88 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.47e-88 | 42 |
defensive cell | 9.49e-77 | 48 |
phagocyte | 9.49e-77 | 48 |
myeloid leukocyte | 1.06e-64 | 72 |
monopoietic cell | 9.95e-61 | 59 |
monocyte | 9.95e-61 | 59 |
monoblast | 9.95e-61 | 59 |
promonocyte | 9.95e-61 | 59 |
macrophage dendritic cell progenitor | 1.16e-58 | 61 |
myeloid lineage restricted progenitor cell | 4.98e-54 | 66 |
granulocyte monocyte progenitor cell | 3.48e-53 | 67 |
myeloid cell | 3.59e-42 | 108 |
common myeloid progenitor | 3.59e-42 | 108 |
leukocyte | 8.11e-33 | 136 |
nongranular leukocyte | 9.77e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 2.32e-28 | 120 |
hematopoietic oligopotent progenitor cell | 3.44e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-27 | 161 |
hematopoietic stem cell | 6.55e-26 | 168 |
hematopoietic cell | 2.06e-24 | 177 |
eosinophil | 1.16e-17 | 2 |
mesenchymal cell | 2.56e-10 | 354 |
connective tissue cell | 4.84e-10 | 361 |
granulocyte | 9.96e-10 | 8 |
motile cell | 4.58e-09 | 386 |
multi fate stem cell | 7.22e-08 | 427 |
somatic stem cell | 1.06e-07 | 433 |
stem cell | 1.73e-07 | 441 |
blood cell | 3.36e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.44e-46 | 76 |
bone element | 5.94e-43 | 82 |
skeletal element | 7.16e-39 | 90 |
immune system | 1.61e-37 | 93 |
hematopoietic system | 1.90e-35 | 98 |
blood island | 1.90e-35 | 98 |
skeletal system | 1.12e-34 | 100 |
hemolymphoid system | 7.13e-32 | 108 |
musculoskeletal system | 2.04e-19 | 167 |
lateral plate mesoderm | 2.43e-15 | 203 |
connective tissue | 1.15e-09 | 371 |
mesoderm | 1.47e-08 | 315 |
mesoderm-derived structure | 1.47e-08 | 315 |
presumptive mesoderm | 1.47e-08 | 315 |