FFCP PHASE1:Hg19::chr1:150738211..150738260,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:150738211..150738260,- to FFCP PHASE1:Hg19::chr1:150738211..150738260,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1520 | |EntrezGene=1520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2545 | |HGNC=2545 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWC9 | |UniProt=B4DWC9 | ||
|association_with_transcript=44bp_to_ENST00000448301,uc001evn.2,uc001evo.1,uc010pcj.1_5end | |||
|cluster_id=chr1:150738211..150738260,- | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_1_at_CTSS_5end | |||
|id=chr1:150738211..150738260,- | |||
|ontology_enrichment_celltype=CL:0000738!5.76e-55!140;CL:0000037!1.14e-51!172;CL:0000566!1.14e-51!172;CL:0002032!7.52e-49!165;CL:0000837!7.52e-49!165;CL:0002087!5.23e-47!119;CL:0002031!1.05e-44!124;CL:0000988!2.38e-44!182;CL:0000766!4.26e-35!76;CL:0000763!3.27e-32!112;CL:0000049!3.27e-32!112;CL:0002009!9.72e-32!65;CL:0000557!8.02e-31!71;CL:0002194!1.03e-30!63;CL:0000576!1.03e-30!63;CL:0000040!1.03e-30!63;CL:0000559!1.03e-30!63;CL:0000839!4.80e-29!70;CL:0002057!2.32e-27!42;CL:0000860!6.59e-24!45;CL:0000542!2.02e-14!53;CL:0000051!2.02e-14!53;CL:0000838!4.68e-14!52;CL:0000945!2.44e-10!24;CL:0000826!2.44e-10!24;CL:0000134!3.01e-09!358;CL:0002320!1.16e-07!365;CL:0002393!2.57e-07!9;CL:0002397!2.57e-07!9;CL:0000236!5.18e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.92e-21;39!CL:0000234;8.92e-21;39!CL:0000860;1.15e-20;33!CL:0002057;1.15e-20;33!CL:0000576;1.24e-20;48!CL:0000766;2.19e-17;69!CL:0002087;4.58e-15;104!CL:0000738;3.67e-13;136!CL:0000763;3.26e-11;100!CL:0000945;6.78e-11;24!CL:0000542;1.86e-09;53!CL:0000988;3.40e-09;177!CL:0000236;4.95e-07;13!CL:0000791;9.31e-07;18!CL:0000789;9.31e-07;18!CL:0002419;9.31e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.32e-62,136;CL:0000037,1.57e-57,168;CL:0002032,9.09e-55,161;CL:0000837,9.09e-55,161;CL:0002087,1.78e-54,115;CL:0002031,2.43e-51,120;CL:0000988,4.45e-50,177;CL:0000766,1.26e-41,72;CL:0002009,2.87e-38,61;CL:0002194,3.52e-37,59;CL:0000576,3.52e-37,59;CL:0000040,3.52e-37,59;CL:0000559,3.52e-37,59;CL:0000557,6.73e-37,67;CL:0000763,1.87e-36,108;CL:0000049,1.87e-36,108;CL:0000839,1.93e-34,66;CL:0000473,4.22e-33,48;CL:0000234,4.22e-33,48;CL:0000860,5.75e-29,42;CL:0002057,5.75e-29,42;CL:0000542,9.58e-16,53;CL:0000051,9.58e-16,53;CL:0000838,2.35e-15,52;CL:0000945,6.96e-11,24;CL:0000826,6.96e-11,24;CL:0000134,6.75e-10,354;CL:0002320,1.55e-08,361;CL:0002393,1.13e-07,9;CL:0002397,1.13e-07,9;CL:0000236,2.37e-07,14;CL:0000791,9.75e-07,18;CL:0000789,9.75e-07,18;CL:0002420,9.75e-07,18;CL:0002419,9.75e-07,18;CL:0000790,9.75e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.81e-21;42!CL:0000049;1.71e-10;108!CL:0000051;1.86e-09;53!CL:0000790;9.31e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.99e-35!112;UBERON:0002390!4.47e-34!102;UBERON:0003061!4.47e-34!102;UBERON:0002371!2.75e-27!80;UBERON:0001474!5.06e-24!86;UBERON:0002405!2.02e-23!115;UBERON:0004765!3.47e-18!101;UBERON:0001434!3.47e-18!101;UBERON:0007023!2.68e-16!115;UBERON:0003081!9.81e-12!216;UBERON:0002204!1.02e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.37e-40,108;UBERON:0002390,5.07e-39,98;UBERON:0003061,5.07e-39,98;UBERON:0002405,1.72e-35,93;UBERON:0002371,9.57e-33,76;UBERON:0001474,2.59e-28,82;UBERON:0004765,3.00e-24,90;UBERON:0001434,1.98e-20,100;UBERON:0007023,1.17e-16,114;UBERON:0003081,9.36e-16,203;UBERON:0002204,8.63e-09,167;UBERON:0002384,1.23e-07,371 | |||
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| ||
|short_description=p1@CTSS | |||
}} | }} |
Latest revision as of 23:06, 16 September 2015
Short description: | p1@CTSS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTSS_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 44bp_to_ENST00000448301, uc001evn.2, uc001evo.1, uc010pcj.1_5end |
EntrezGene: | CTSS |
HGNC: | 2545 |
UniProt: | B4DWC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.37e-40 | 108 |
hematopoietic system | 5.07e-39 | 98 |
blood island | 5.07e-39 | 98 |
immune system | 1.72e-35 | 93 |
bone marrow | 9.57e-33 | 76 |
bone element | 2.59e-28 | 82 |
skeletal element | 3.00e-24 | 90 |
skeletal system | 1.98e-20 | 100 |
adult organism | 1.17e-16 | 114 |
lateral plate mesoderm | 9.36e-16 | 203 |
musculoskeletal system | 8.63e-09 | 167 |
connective tissue | 1.23e-07 | 371 |