FFCP PHASE1:Hg19::chr2:33359579..33359590,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |||
|TSSclassifier=strong | |||
|UniProt=E7EV71,Q14766,B7ZLY3 | |||
|association_with_transcript=-73bp_to_ENST00000390003,ENST00000418533,NM_000627,NM_001166264,NM_001166265,NM_001166266_5end | |||
|cluster_id=chr2:33359579..33359590,+ | |||
|coexpression_cluster_id=C2697 | |||
|description=CAGE_peak_4_at_LTBP1_5end | |||
|id=chr2:33359579..33359590,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.37e-34!180;CL:0000680!9.34e-21!57;CL:0000056!9.34e-21!57;CL:0000355!9.34e-21!57;CL:0000057!1.79e-20!75;CL:0000187!1.30e-19!54;CL:0000183!8.90e-19!59;CL:0000192!7.38e-18!42;CL:0000514!7.38e-18!42;CL:0000359!7.44e-16!32;CL:0000393!1.23e-15!60;CL:0000211!1.23e-15!60;CL:0000222!3.48e-09!119;CL:0002620!6.91e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-15;32!CL:0000192;2.83e-14;43!CL:0000187;1.82e-11;55!CL:0000057;2.60e-10;73!CL:0002620;3.24e-09;23!CL:0000393;8.16e-09;61!CL:0000211;8.16e-09;61!CL:0002494;2.34e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.01e-23,76;CL:0000680,1.16e-22,58;CL:0000056,1.16e-22,58;CL:0000355,1.16e-22,58;CL:0000187,2.25e-21,55;CL:0000192,3.61e-19,43;CL:0000514,3.61e-19,43;CL:0000393,3.78e-17,61;CL:0000211,3.78e-17,61;CL:0000359,1.73e-16,32;CL:0000222,6.07e-10,121;CL:0002620,2.67e-09,23;CL:0002494,2.23e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.83e-14;43!CL:0000355;2.11e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.94e-31!83;UBERON:0002329!6.94e-31!83;UBERON:0003077!6.94e-31!83;UBERON:0003059!6.94e-31!83;UBERON:0007282!6.94e-31!83;UBERON:0009618!6.94e-31!83;UBERON:0007285!6.94e-31!83;UBERON:0004290!2.75e-26!70;UBERON:0001009!1.56e-24!113;UBERON:0004535!4.86e-24!110;UBERON:0000486!1.01e-21!82;UBERON:0002385!2.47e-21!63;UBERON:0001015!2.47e-21!63;UBERON:0000383!2.47e-21!63;UBERON:0001134!4.91e-21!61;UBERON:0002036!4.91e-21!61;UBERON:0003082!4.91e-21!61;UBERON:0004872!1.79e-20!84;UBERON:0002049!3.36e-20!79;UBERON:0007798!3.36e-20!79;UBERON:0001637!4.76e-19!42;UBERON:0003509!4.76e-19!42;UBERON:0004572!4.76e-19!42;UBERON:0005256!2.11e-18!143;UBERON:0000055!3.53e-17!69;UBERON:0001981!1.29e-16!60;UBERON:0007500!1.29e-16!60;UBERON:0004537!1.29e-16!60;UBERON:0006965!1.29e-16!60;UBERON:0000481!1.48e-16!347;UBERON:0004573!2.81e-16!33;UBERON:0004571!2.81e-16!33;UBERON:0000475!2.87e-16!365;UBERON:0000119!3.68e-16!312;UBERON:0000468!1.00e-15!659;UBERON:0000483!4.54e-15!309;UBERON:0000477!1.46e-13!286;UBERON:0000467!2.14e-13!625;UBERON:0000480!3.44e-13!626;UBERON:0003914!1.93e-12!118;UBERON:0003102!2.68e-12!95;UBERON:0004111!3.40e-12!241;UBERON:0000490!4.83e-11!138;UBERON:0002100!7.17e-11!216;UBERON:0003104!1.95e-10!238;UBERON:0009142!1.95e-10!238;UBERON:0007100!3.73e-10!27;UBERON:0000948!7.12e-10!24;UBERON:0005498!7.12e-10!24;UBERON:0004140!7.12e-10!24;UBERON:0009881!7.12e-10!24;UBERON:0004141!7.12e-10!24;UBERON:0003084!7.12e-10!24;UBERON:0007005!7.12e-10!24;UBERON:0004139!7.12e-10!24;UBERON:0004291!7.12e-10!24;UBERON:0000947!1.71e-09!21;UBERON:0010191!1.71e-09!21;UBERON:0002050!1.75e-09!605;UBERON:0005423!1.75e-09!605;UBERON:0000923!2.60e-09!604;UBERON:0005291!2.60e-09!604;UBERON:0006598!2.60e-09!604;UBERON:0002532!2.60e-09!604;UBERON:0000922!3.22e-09!612;UBERON:0000025!4.80e-09!194;UBERON:0002199!3.07e-08!45;UBERON:0002416!3.07e-08!45;UBERON:0000479!4.53e-08!787;UBERON:0002097!4.72e-08!40;UBERON:0000926!2.29e-07!448;UBERON:0004120!2.29e-07!448;UBERON:0006603!2.29e-07!448;UBERON:0002067!8.65e-07!9;UBERON:0004016!8.65e-07!9;UBERON:0010083!8.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.11e-15;33!UBERON:0004571;1.11e-15;33!UBERON:0001637;9.46e-15;42!UBERON:0003509;9.46e-15;42!UBERON:0004572;9.46e-15;42!UBERON:0007100;2.73e-10;25!UBERON:0000948;5.43e-10;22!UBERON:0000947;1.58e-09;21!UBERON:0010191;1.58e-09;21!UBERON:0002385;3.13e-09;31!UBERON:0001015;3.13e-09;31!UBERON:0000383;3.13e-09;31!UBERON:0007500;1.44e-08;56!UBERON:0001981;1.44e-08;56!UBERON:0004537;1.44e-08;56!UBERON:0000055;3.23e-08;65!UBERON:0000075;1.08e-07;16!UBERON:0002049;1.16e-07;75!UBERON:0007798;1.16e-07;75!UBERON:0002097;1.19e-07;41!UBERON:0002067;1.87e-07;9!UBERON:0004535;2.32e-07;109!UBERON:0002204;3.98e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.49e-29,73;UBERON:0002329,3.05e-28,71;UBERON:0003059,3.05e-28,71;UBERON:0007282,3.05e-28,71;UBERON:0004290,3.05e-28,71;UBERON:0009618,3.05e-28,71;UBERON:0003077,4.08e-28,72;UBERON:0007285,4.08e-28,72;UBERON:0007503,3.26e-25,78;UBERON:0001009,3.71e-25,112;UBERON:0004535,1.33e-24,109;UBERON:0001134,2.17e-22,62;UBERON:0002036,2.17e-22,62;UBERON:0003082,2.17e-22,62;UBERON:0002385,3.92e-22,64;UBERON:0001015,3.92e-22,64;UBERON:0000383,3.92e-22,64;UBERON:0000486,1.26e-21,83;UBERON:0004872,1.88e-20,83;UBERON:0002049,2.99e-20,78;UBERON:0007798,2.99e-20,78;UBERON:0001637,9.41e-20,42;UBERON:0003509,9.41e-20,42;UBERON:0004572,9.41e-20,42;UBERON:0003104,2.76e-17,160;UBERON:0009142,2.76e-17,160;UBERON:0005256,2.88e-17,122;UBERON:0004573,4.35e-17,33;UBERON:0004571,4.35e-17,33;UBERON:0000055,6.59e-17,68;UBERON:0007500,1.46e-16,59;UBERON:0001981,1.46e-16,59;UBERON:0004537,1.46e-16,59;UBERON:0006965,1.46e-16,59;UBERON:0000490,3.23e-15,148;UBERON:0003914,5.44e-13,117;UBERON:0003102,1.28e-12,99;UBERON:0000119,1.55e-12,309;UBERON:0000926,5.74e-12,315;UBERON:0004120,5.74e-12,315;UBERON:0006603,5.74e-12,315;UBERON:0000483,1.60e-11,306;UBERON:0007100,2.12e-11,27;UBERON:0000948,4.33e-11,24;UBERON:0005498,4.33e-11,24;UBERON:0004140,4.33e-11,24;UBERON:0009881,4.33e-11,24;UBERON:0004141,4.33e-11,24;UBERON:0003084,4.33e-11,24;UBERON:0007005,4.33e-11,24;UBERON:0004139,4.33e-11,24;UBERON:0004291,4.33e-11,24;UBERON:0002097,8.04e-10,41;UBERON:0002199,9.78e-10,46;UBERON:0002416,9.78e-10,46;UBERON:0000947,1.57e-09,21;UBERON:0010191,1.57e-09,21;UBERON:0002050,4.62e-08,564;UBERON:0000479,8.33e-08,773;UBERON:0000923,9.35e-08,560;UBERON:0010316,9.35e-08,560;UBERON:0005291,9.35e-08,560;UBERON:0006598,9.35e-08,560;UBERON:0010317,9.35e-08,560;UBERON:0002532,9.35e-08,560;UBERON:0002100,1.26e-07,199;UBERON:0000075,1.35e-07,16;UBERON:0002067,1.82e-07,9;UBERON:0004016,1.82e-07,9;UBERON:0010083,1.82e-07,9;UBERON:0004111,6.94e-07,240;UBERON:0005423,8.34e-07,581 | |||
|phase1_expression=0,4.28201047781966,0.704772020479856,3.00219895059391,1.34088328328186,3.48935409640147,0,8.84407822797563,0.522371256399677,3.19454117451962,0,0,0.527533956456907,53.3432981257801,32.8083401970637,32.943932176137,20.4916139528152,15.3365118981348,15.6138495612962,2.09305798730539,2.04000691244253,0.940364164434263,0.85870796139317,0.684372125364421,1.75759695432724,0,0,0,0.393364276848904,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,8.04841031644363,7.28816602508123,27.469375581227,19.5521785147997,3.76600949298142,23.858578411533,13.6257763684738,0,1.33037638477538,1.49319135678314,1.44076983047484,0,0,0,0,0,0,0,0,6.55915944310127,10.3228151412735,6.94281003215189,5.08777147731609,20.5554723742854,0.275118041940067,3.34391946458897,0.775250277507987,2.49036383880697,7.36385348082274,10.4735622448378,12.9246257972147,19.5249646038536,0.735326160691737,0,0,0,0,0,0,0.732806975721629,0,0,1.74437620857014,15.9031024542502,19.7543598196744,13.902963985388,94.9429214678573,19.861429403108,9.53151920241922,7.47242970107935,10.853372130355,19.917506265585,21.4189968590804,20.4327378891823,3.02714855289863,4.03323147135999,22.4948574560445,48.3848119086997,22.818872861778,57.836639373547,12.6829258535266,21.0434827678571,23.73618633268,92.4818395784666,27.6377213951478,61.9954687054593,3.56400857184616,5.93440630268536,13.6524204290704,7.18618141816238,48.6491369327251,19.5184891000264,76.4696958736345,1.31693286264251,4.59731693698529,7.66214100423644,13.6118619792025,2.33206526395521,3.63047560991565,5.29829752898905,5.40163972951924,3.40073346486848,6.44101350114073,5.76962254627928,6.91982962189192,2.63079913935236,12.3692549379616,17.4894807420369,10.5069936932228,20.235546773447,3.92933183087797,5.76506013855658,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0,48.4993550222429,17.3675053312079,6.90674606762403,15.7885095530873,36.0939740834793,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,2.94017422771084,0,0,0,0,0,15.7842385474644,5.81676512665715,0,0,3.88871469665824,10.7516740752407,25.9983696319895,1.44331342025273,1.15930404975077,30.291443112842,1.15493158208859,1.85194205030644,2.85381228351897,0,0,0,0,0.148631162288728,5.62403003920662,1.34385702559088,0.850650583454319,7.6124744297421,5.52204483176528,0,0,0,0,0,0.12624243342638,0.507983154337352,0,0,1.71072446022705,0.925447434329912,0,0,24.556707471634,12.2068819273318,25.3750468940487,0.775630294546667,25.0359512096318,0,3.19125739901845,4.16029747645464,9.00225809917497,4.25547396069835,16.5181750989982,9.29356958777959,3.25572963234866,1.64648067356154,0.977208552881205,4.97548728239564,8.71147060226772,0,0,0.099972991182057,0,0,0,24.2021104046498,8.04033550838797,8.5582143024431,26.494979120167,9.04095819221687,3.22309733831812,0,0,0,0,7.11464947822898,0,0,0,0.637938751653163,0,0,2.07207756718018,45.5185434278009,32.511083868879,23.0575270144775,14.7659311686873,28.9054961851402,6.93890626149313,27.1768082783095,13.5425744877474,0,9.31257641632544,15.9414143648505,4.42486004500088,8.86212867574445,1.37060810223918,1.71571711905428,0.206768026122887,0,0.106727557803444,0,1.66435439510497,0.604780586659361,0.496215615637554,4.45039722535381,3.36792113319688,0,6.65219423786715,2.2519548960105,1.48418066444991,8.01890407773809,3.37367278094941,5.00975651684236,31.6745201802009,15.4559803351746,0,1.60405176242628,0,2.52591785962135,4.91646153618136,0.917870904715969,0,1.30926073077505,0.784349769176855,1.46139224653261,0.527758144464379,0,0,1.0795795805107,0,3.79325012561394,1.00337954770971,0,0.831076008928724,0.671624264166535,0.219259876645935,0,0,0.328014645699706,0,2.16386124460217,0.27470839445503,0.165018999841176,9.18824860793876,3.25030123018261,12.8547143875328,13.6305712791892,5.85384745035649,3.22357716924872,6.20264576180388,7.94909812025225,2.61030049045611,2.04543905798642,1.51354460599453,9.75181000629771,8.84074309879488,32.4136289736244,2.93357564481095,0.464845549297286,49.4255384524105,16.0318572136938,29.5712236969045,20.2276291520468,33.9273866909278,57.0798594840074,22.3274823317506,3.34942532423701,45.2422577347778,5.3376454298671,4.09436466098134,6.41908482050881,42.6392352220755,11.7742296029885,2.15846949099978,1.92175920815238,2.35624804691373,16.3767810074386,22.1914449642212,6.31887684358472,9.26504104270222,28.270764797229,9.50851320810799,11.7389923810868,2.40389234321312,14.6910551606316,20.4005177112066,40.4697774897144,35.076070820301,4.6302042741335,9.18252652865286,15.6240990261282,8.675057946793,4.7888252430481,0.573645408816206,1.8667317792493,8.91677628703126,11.7071151143297,7.81098250601357,1.31717957183961,27.7015416848972,21.6959526551889,1.53955380360819,2.68120910214315,1.08890984861323,1.22386941009813,0,0,0,0.229723400206959,4.5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| |||
|short_description=p4@LTBP1 | |||
}} |
Latest revision as of 23:39, 16 September 2015
Short description: | p4@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTBP1_5end |
Coexpression cluster: | C2697_Chondrocyte_mesenchymal_Fibroblast_Smooth_Anulus_hepatic_aorta |
Association with transcript: | -73bp_to_ENST00000390003, ENST00000418533, NM_000627, NM_001166264, NM_001166265, NM_001166266_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | E7EV71Q14766B7ZLY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.01e-23 | 76 |
muscle precursor cell | 1.16e-22 | 58 |
myoblast | 1.16e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-22 | 58 |
muscle cell | 2.25e-21 | 55 |
smooth muscle cell | 3.61e-19 | 43 |
smooth muscle myoblast | 3.61e-19 | 43 |
electrically responsive cell | 3.78e-17 | 61 |
electrically active cell | 3.78e-17 | 61 |
vascular associated smooth muscle cell | 1.73e-16 | 32 |
mesodermal cell | 6.07e-10 | 121 |
skin fibroblast | 2.67e-09 | 23 |
cardiocyte | 2.23e-07 | 16 |