FFCP PHASE1:Hg19::chr2:3391846..3391853,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51112 | |EntrezGene=51112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24284 | |HGNC=24284 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000411973_5end | |association_with_transcript=-44bp_to_ENST00000411973_5end | ||
|cluster_id=chr2:3391846..3391853,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_20_at_TRAPPC12_5end | |description=CAGE_peak_20_at_TRAPPC12_5end | ||
|id=chr2:3391846..3391853,+ | |id=chr2:3391846..3391853,+ | ||
|ontology_enrichment_celltype=CL:0000312!2.98e-10!5;CL:0000240!1.08e-08!6;CL:0000311!1.08e-08!6;CL:0000079!1.08e-08!6;CL:0000237!1.08e-08!6;CL:0000036!1.08e-08!6;CL:0000357!1.08e-08!6;CL:0000114!1.08e-08!6;CL:0002159!1.14e-08!13;CL:0000242!3.09e-07!2;CL:0000575!3.28e-07!2;CL:1000487!4.42e-07!2;CL:0000362!9.94e-07!8 | |ontology_enrichment_celltype=CL:0000312!2.98e-10!5;CL:0000240!1.08e-08!6;CL:0000311!1.08e-08!6;CL:0000079!1.08e-08!6;CL:0000237!1.08e-08!6;CL:0000036!1.08e-08!6;CL:0000357!1.08e-08!6;CL:0000114!1.08e-08!6;CL:0002159!1.14e-08!13;CL:0000242!3.09e-07!2;CL:0000575!3.28e-07!2;CL:1000487!4.42e-07!2;CL:0000362!9.94e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.31e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.45e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.54e-27;10!UBERON:0005564;2.54e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001870!5.60e-07!2;UBERON:0000473!5.71e-07!8 | |ontology_enrichment_uberon=UBERON:0001870!5.60e-07!2;UBERON:0000473!5.71e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.35e-34;8!UBERON:0003135;5.83e-25;11!UBERON:0000991;1.12e-13;21!UBERON:0003101;4.14e-13;22!UBERON:0000079;4.14e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.68e-34,8;UBERON:0003135,5.49e-25,11;UBERON:0000991,1.09e-13,21;UBERON:0009196,1.09e-13,21;UBERON:0009117,1.09e-13,21;UBERON:0005564,1.09e-13,21;UBERON:0004176,4.01e-13,22;UBERON:0003101,4.01e-13,22;UBERON:0000079,4.01e-13,22;UBERON:0002323,7.52e-07,46 | |||
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|short_description=p20@TRAPPC12 | |short_description=p20@TRAPPC12 | ||
}} | }} |
Latest revision as of 00:18, 17 September 2015
Short description: | p20@TRAPPC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TRAPPC12_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -44bp_to_ENST00000411973_5end |
EntrezGene: | TRAPPC12 |
HGNC: | 24284 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.45e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 7.68e-34 | 8 |
male reproductive organ | 5.49e-25 | 11 |
gonad | 1.09e-13 | 21 |
indifferent external genitalia | 1.09e-13 | 21 |
indifferent gonad | 1.09e-13 | 21 |
gonad primordium | 1.09e-13 | 21 |
external genitalia | 4.01e-13 | 22 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
body cavity | 7.52e-07 | 46 |