FFCP PHASE1:Hg19::chr2:36923830..36923874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5212 | |EntrezGene=5212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12697 | |HGNC=12697 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXI7,A1A526,E9PF47 | |UniProt=Q6UXI7,A1A526,E9PF47 | ||
|association_with_transcript=0bp_to_ENST00000379242,ENST00000389975,ENST00000402257,NM_001177969,NM_001177970,NM_001177971,NM_001177972,NM_053276_5end | |association_with_transcript=0bp_to_ENST00000379242,ENST00000389975,ENST00000402257,NM_001177969,NM_001177970,NM_001177971,NM_001177972,NM_053276_5end | ||
|cluster_id=chr2:36923830..36923874,+ | |||
|coexpression_cluster_id=C4224 | |coexpression_cluster_id=C4224 | ||
|description=CAGE_peak_1_at_VIT_5end | |description=CAGE_peak_1_at_VIT_5end | ||
|id=chr2:36923830..36923874,+ | |id=chr2:36923830..36923874,+ | ||
|ontology_enrichment_celltype=CL:0000136;2.04e-13;13!CL:0002620;8.06e-07;23 | |ontology_enrichment_celltype=CL:0000136!5.33e-11!15;CL:0000057!8.03e-10!75;CL:0002620!4.21e-07!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;2.04e-13;13!CL:0002620;8.06e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.57e-15,15;CL:0000057,5.43e-07,76;CL:0002620,8.59e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;1.19e-10;9!UBERON:0001557;1.19e-10;9!UBERON:0001013;8.48e-10;14!UBERON:0004457;4.69e-08;9!UBERON:0000042;4.69e-08;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-14!115;UBERON:0003102!1.26e-12!95;UBERON:0001013!3.77e-08!14;UBERON:0001737!5.65e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.19e-10;9!UBERON:0001557;1.19e-10;9!UBERON:0001013;8.48e-10;14!UBERON:0004457;4.69e-08;9!UBERON:0000042;4.69e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.23e-10,9;UBERON:0003102,2.90e-10,99;UBERON:0007023,9.29e-10,114;UBERON:0001013,1.15e-09,14;UBERON:0001557,7.12e-07,19;UBERON:0000161,7.48e-07,36 | |||
|phase1_expression=33.0654650272413,12.417830385677,21.5660238266836,11.0080628188443,15.1966772105278,3.48935409640147,5.06599756336621,6.31719873426831,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,2.462390822334,0.795285947051099,0.486634870302636,0,0,0,0.72038491523742,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0.892997282840798,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,1.14734648299525,0.709336764396714,1.68203280042692,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0,1.22492502752936,0,2.58314452939414,1.18800285728205,5.93440630268536,0,0,0.168336113954066,0.125118519871964,1.93944880838928,0.877955241761676,6.12975591598039,6.30999847407706,0.226864366320042,1.4351170855109,6.19316427573846,5.51022943014861,4.80145753735044,8.96557004374418,5.41045134095821,14.8893485065272,0.168776332241266,0.194874010322397,1.26216887122057,3.31379635112278,55.6062435456713,3.55009592516614,3.82857973265033,2.20428770003634,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,1.92972281457866,1.38134921352481,4.17931135228781,1.44375896333917,11.0025324037055,10.9580048550766,8.19437501603839,11.0293972732394,8.27941887551143,7.82993043066619,9.70785418753184,10.792180581894,8.46443745282059,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,7.18768510845476,0.352226082707465,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,1.40402559083543,0.743155811443641,0.93733833986777,0.671928512795438,0,0,0,1.15014803749563,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,10.7296933755565,3.381211010224,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,1.14861935834114,0,6.80472141337622,2.26023954805422,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,46.5854729829008,40.6818094457529,40.3718182486873,34.9081416678285,3.31040709700491,0,2.0694614258501,0.664225598535437,0.368738337083406,1.65078867489357,0,0,0,0,0,0,0,0,7.19512642674453,4.29693525206575,2.80660094433074,7.56020980608636,11.2575594794675,0.64341568457443,1.48418066444991,0.925258162815933,1.06537035187876,2.79232330446951,0.519254429183621,1.97557643381931,0.362578348774867,0.200506470303285,0,1.26295892981067,1.27463817604702,2.62248829918848,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0.54941678891006,0.990113999047056,0,0,0,0.096670718292122,0.616194468458578,1.22802939780904,0.275673144969061,2.0409846524972,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,1.25924938732256,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,3.5002357271853,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0.409499734223957,3.11091950298168,0,1.10273068709225,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,1.06428319221179,1.26664581178598,15.4768599691154,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4176944707291,0,0,0,0,0,0,0,0,0,0,7.05059530978605,0,0,0,0,2.98092366383228,16.1447512035209,3.6868891717015,2.01308497103174,2.33588798396672,12.1140619149265,0,0,0,0,0,0,13.0392279551986,0,0,0,1.67121139316383,1.48482340416319,0,0,0.281338832821026,0,0,0,4.18420775327246,0,0,1.32949287252801,0,0.933118762985422,0,0,0,10.1602707806042,0,11.1136990144637,0.969332746095218,1.02044907978036,0,0,0,3.62499787717397,0.796554137998498,0,2.6002644994473,0,0,0,0,0.120596438625408,3.05163472634166,2.98564001814306,2.06883333267483,1.31631238292384,3.48603083260768,0,4.38616473471643,0,0,0.179515288819544,0.434589487688032,15.950057986596,8.5185761863732,33.0481561131554,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.06149077404007,0.611030144933625,0,0.123563938946503,0,0.471807930864739,3.21031058919516,0.234264445725339,0,5.6742739490306,0,2.76209081994573,0,0,29.3817595272469,0,0.103688191397247,0,0.992975867626496,0.313932918407225,0,0,0,0,0,10.8824008225503,5.94070672022902,0,0.0967563312890851,0,0.0821154570532092,10.2808357477725,0,9.94315259434343,0,0,0.443175571691151,14.861905087845,0,1.49417096317547,0,0,0.343609788497747,0,0,0,0,0.543616824294456,0.523014231561666,13.9737558161761,0,0,0,0,0.429765441419957,0,5.02708322290058,4.58320848023367,2.15361907373044,5.19165401297377,3.86303443322914,11.3817443295355,1.14211903227435,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.364497339948148,0,0.236417121897595,0.157363764404994,0,1.43429871466276,0,5.71756261098694,11.2555634962123,0,0,0.864221491201268,0,0,0,0.170388021785422,10.6513366028918,0.146552233678082,0,0.258565912723101,0.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| ||
|short_description=p1@VIT | |short_description=p1@VIT | ||
}} | }} |
Latest revision as of 01:32, 17 September 2015
Short description: | p1@VIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VIT_5end |
Coexpression cluster: | C4224_Olfactory_Fibroblast_normal_dura_mesothelioma_chorionic_Adipocyte |
Association with transcript: | 0bp_to_ENST00000379242, ENST00000389975, ENST00000402257, NM_001177969, NM_001177970, NM_001177971, NM_001177972, NM_053276_5end |
EntrezGene: | VIT |
HGNC: | 12697 |
UniProt: | Q6UXI7A1A526E9PF47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.57e-15 | 15 |
fibroblast | 5.43e-07 | 76 |
skin fibroblast | 8.59e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.23e-10 | 9 |
surface structure | 2.90e-10 | 99 |
adult organism | 9.29e-10 | 114 |
adipose tissue | 1.15e-09 | 14 |
upper respiratory tract | 7.12e-07 | 19 |
orifice | 7.48e-07 | 36 |