FFCP PHASE1:Hg19::chr20:52824813..52824848,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5203 | |EntrezGene=5203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8868 | |HGNC=8868 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493356_5end | |association_with_transcript=0bp_to_ENST00000493356_5end | ||
|cluster_id=chr20:52824813..52824848,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_7_at_PFDN4_5end | |description=CAGE_peak_7_at_PFDN4_5end | ||
|id=chr20:52824813..52824848,+ | |id=chr20:52824813..52824848,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-15!115;UBERON:0001049!4.19e-14!57;UBERON:0005068!4.19e-14!57;UBERON:0006241!4.19e-14!57;UBERON:0007135!4.19e-14!57;UBERON:0001017!4.90e-12!82;UBERON:0000955!6.33e-12!69;UBERON:0006238!6.33e-12!69;UBERON:0005743!2.94e-11!86;UBERON:0000988!6.19e-11!3;UBERON:0002020!7.85e-11!34;UBERON:0003528!7.85e-11!34;UBERON:0002346!9.46e-11!90;UBERON:0006331!1.13e-10!3;UBERON:0002298!2.93e-10!8;UBERON:0003075!3.01e-10!86;UBERON:0007284!3.01e-10!86;UBERON:0002616!3.25e-10!59;UBERON:0000073!9.50e-10!94;UBERON:0001016!9.50e-10!94;UBERON:0001893!5.33e-09!34;UBERON:0002780!1.10e-08!41;UBERON:0001890!1.10e-08!41;UBERON:0006240!1.10e-08!41;UBERON:0001950!1.21e-08!20;UBERON:0003080!2.00e-08!42;UBERON:0001869!6.14e-08!32;UBERON:0002619!8.85e-08!22;UBERON:0002148!1.01e-07!2;UBERON:0009662!1.01e-07!2;UBERON:0003076!1.21e-07!15;UBERON:0003057!1.21e-07!15;UBERON:0002791!1.27e-07!33;UBERON:0000033!3.29e-07!123;UBERON:0000924!7.80e-07!173;UBERON:0006601!7.80e-07!173;UBERON:0000956!9.84e-07!25;UBERON:0000203!9.84e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-15!115;UBERON:0001049!4.19e-14!57;UBERON:0005068!4.19e-14!57;UBERON:0006241!4.19e-14!57;UBERON:0007135!4.19e-14!57;UBERON:0001017!4.90e-12!82;UBERON:0000955!6.33e-12!69;UBERON:0006238!6.33e-12!69;UBERON:0005743!2.94e-11!86;UBERON:0000988!6.19e-11!3;UBERON:0002020!7.85e-11!34;UBERON:0003528!7.85e-11!34;UBERON:0002346!9.46e-11!90;UBERON:0006331!1.13e-10!3;UBERON:0002298!2.93e-10!8;UBERON:0003075!3.01e-10!86;UBERON:0007284!3.01e-10!86;UBERON:0002616!3.25e-10!59;UBERON:0000073!9.50e-10!94;UBERON:0001016!9.50e-10!94;UBERON:0001893!5.33e-09!34;UBERON:0002780!1.10e-08!41;UBERON:0001890!1.10e-08!41;UBERON:0006240!1.10e-08!41;UBERON:0001950!1.21e-08!20;UBERON:0003080!2.00e-08!42;UBERON:0001869!6.14e-08!32;UBERON:0002619!8.85e-08!22;UBERON:0002148!1.01e-07!2;UBERON:0009662!1.01e-07!2;UBERON:0003076!1.21e-07!15;UBERON:0003057!1.21e-07!15;UBERON:0002791!1.27e-07!33;UBERON:0000033!3.29e-07!123;UBERON:0000924!7.80e-07!173;UBERON:0006601!7.80e-07!173;UBERON:0000956!9.84e-07!25;UBERON:0000203!9.84e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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| ||
|short_description=p7@PFDN4 | |short_description=p7@PFDN4 | ||
}} | }} |
Latest revision as of 02:39, 17 September 2015
Short description: | p7@PFDN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PFDN4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000493356_5end |
EntrezGene: | PFDN4 |
HGNC: | 8868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |