FFCP PHASE1:Hg19::chr2:136872980..136873065,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2561 | |||
|TSSclassifier=strong | |||
|UniProt=Q5MIL4 | |||
|association_with_transcript=0bp_to_AY826773_5end | |||
|cluster_id=chr2:136872980..136873065,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_2_at_CXCR4_5end | |||
|id=chr2:136872980..136873065,- | |||
|ontology_enrichment_celltype=CL:0000738!7.91e-58!140;CL:0000037!6.70e-51!172;CL:0000566!6.70e-51!172;CL:0002087!1.36e-50!119;CL:0000988!4.75e-48!182;CL:0002032!1.21e-45!165;CL:0000837!1.21e-45!165;CL:0002031!8.46e-45!124;CL:0000766!2.73e-28!76;CL:0000860!5.38e-26!45;CL:0002057!1.31e-25!42;CL:0002194!4.00e-25!63;CL:0000576!4.00e-25!63;CL:0000040!4.00e-25!63;CL:0000559!4.00e-25!63;CL:0002009!1.10e-24!65;CL:0000763!7.35e-23!112;CL:0000049!7.35e-23!112;CL:0000839!1.25e-22!70;CL:0000542!9.61e-22!53;CL:0000051!9.61e-22!53;CL:0000838!1.69e-21!52;CL:0000557!2.61e-21!71;CL:0000084!1.17e-11!25;CL:0000827!1.17e-11!25;CL:0000791!3.10e-11!18;CL:0000789!3.10e-11!18;CL:0002420!3.10e-11!18;CL:0002419!3.10e-11!18;CL:0000790!3.10e-11!18;CL:0000945!4.67e-09!24;CL:0000826!4.67e-09!24;CL:0000236!8.53e-09!14;CL:0000094!4.18e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.90e-25;33!CL:0002057;6.90e-25;33!CL:0000473;3.11e-19;39!CL:0000234;3.11e-19;39!CL:0000542;1.33e-18;53!CL:0000576;1.53e-18;48!CL:0002087;3.37e-17;104!CL:0000084;4.92e-16;25!CL:0000791;1.16e-15;18!CL:0000789;1.16e-15;18!CL:0002419;1.16e-15;18!CL:0000738;3.00e-15;136!CL:0000766;3.14e-15;69!CL:0000236;1.84e-13;13!CL:0000094;4.34e-12;8!CL:0000945;1.88e-11;24!CL:0000988;3.31e-10;177!CL:0000624;2.68e-09;6!CL:0000081;3.41e-08;11!CL:0000763;6.12e-08;100!CL:0000625;1.34e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.38e-66,136;CL:0002087,4.14e-58,115;CL:0000037,6.78e-57,168;CL:0000988,8.77e-55,177;CL:0002032,1.76e-49,161;CL:0000837,1.76e-49,161;CL:0002031,4.31e-49,120;CL:0000860,5.97e-31,42;CL:0002057,5.97e-31,42;CL:0000766,3.15e-30,72;CL:0000838,2.59e-29,52;CL:0000473,7.04e-29,48;CL:0000234,7.04e-29,48;CL:0000542,1.68e-28,53;CL:0000051,1.68e-28,53;CL:0002194,1.16e-24,59;CL:0000576,1.16e-24,59;CL:0000040,1.16e-24,59;CL:0000559,1.16e-24,59;CL:0002009,1.98e-23,61;CL:0000763,2.73e-21,108;CL:0000049,2.73e-21,108;CL:0000839,1.09e-20,66;CL:0000557,3.43e-20,67;CL:0000084,4.14e-16,25;CL:0000827,4.14e-16,25;CL:0000791,8.35e-16,18;CL:0000789,8.35e-16,18;CL:0002420,8.35e-16,18;CL:0002419,8.35e-16,18;CL:0000790,8.35e-16,18;CL:0000236,3.29e-12,14;CL:0000094,4.21e-12,8;CL:0000134,6.99e-12,354;CL:0000945,3.01e-11,24;CL:0000826,3.01e-11,24;CL:0002320,3.81e-11,361;CL:0000624,2.72e-09,6;CL:0000219,1.27e-08,386;CL:0000081,3.34e-08,11;CL:0000625,9.83e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.32e-23;42!CL:0000051;1.33e-18;53!CL:0000790;1.16e-15;18!CL:0000049;5.77e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-29!102;UBERON:0003061!1.19e-29!102;UBERON:0002193!3.41e-28!112;UBERON:0002371!3.09e-18!80;UBERON:0001474!2.08e-15!86;UBERON:0002405!3.19e-15!115;UBERON:0004765!6.19e-11!101;UBERON:0001434!6.19e-11!101;UBERON:0000178!1.25e-09!15;UBERON:0000179!1.25e-09!15;UBERON:0000463!1.25e-09!15;UBERON:0003081!4.48e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.36e-11;15!UBERON:0000179;1.36e-11;15!UBERON:0000463;1.36e-11;15!UBERON:0002390;3.35e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.02e-32,98;UBERON:0003061,4.02e-32,98;UBERON:0002193,4.52e-31,108;UBERON:0002405,1.01e-21,93;UBERON:0002371,2.57e-18,76;UBERON:0001474,4.81e-16,82;UBERON:0004765,1.61e-13,90;UBERON:0003081,3.40e-12,203;UBERON:0000178,1.21e-11,15;UBERON:0000179,1.21e-11,15;UBERON:0000463,1.21e-11,15;UBERON:0001434,5.51e-11,100;UBERON:0002384,3.73e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.376627918784408,2.36881557818649,1.06730766284929,1.18066171970519,12.194292582316,7.67658796194425,3.8704030829019,0,0,0,1.23947520928483,0.995184627411951,2.05520307534393,0.553995408531877,10.2277668209772,4.12320654360118,0.895661896959697,1.94336199611388,1.03030227053675,12.7950450126017,10.2026504795979,10.1885305698883,6.50801303335917,7.81218987241469,5.57471467611186,0.863077176966451,2.0492856522328,2.36482229888585,5.5159308917859,12.9096936716765,4.06279459783025,13.7416907866101,14.191119803008,8.09004544002305,7.03992952453076,3.53021929783703,3.19668562899521,0.659702600373432,2.99195486432448,2.98357325372886,1.7412554317715,1.13477044938228,0.622822248995575,4.27122730936464,6.25779502104242,4.12658804939722,2.42159801053347,0.368277635987565,1.26584954976354,8.87272202510155,5.52771179909113,1.25795187305026,4.26848798356681,4.35512989240368,1.12507910687956,2.28010194992999,3.77941686678271,0.91332076882317,0,4.91524750135918,8.00558328477199,3.41384178053206,8.00791974072025,4.59801951963587,3.96626923670917,3.81621501814146,29.0298614245819,34.6469941728854,43.5791480062761,3.96513985737078,4.48406850385229,1.31692042387539,2.360517241366,21.6155919512041,34.9522548299166,2.84217042164153,29.9848485302903,17.5175688121851,23.3792074089494,1.6711568532776,28.2821671175844,19.7165166179423,8.39491977671548,3.84273959177025,5.59255194507476,0.822189523018381,1.10540007114339,0,14.2355100635578,12.8419597483062,14.6349733326968,0.339928028092699,13.0294967824653,17.8686271650968,11.8919255249166,1.91139248594458,1.30216690771284,0.950452044448374,2.10805166708882,1.66382594500744,0,2.36777252044017,1.64225599384209,9.67712367478716,25.1393784036497,13.3238451572175,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.522389211897802,0.797747763113191,11.6860405909618,9.15191857248205,8.54352253057999,1.19257444420023,0,2.08284300964557,0.56530794192401,0.419499436209906,3.85165258716094,0.835979866147242,0.775250277507987,0,2.00832367658802,0,0.760272105718513,0,1.10298924103761,5.67099363517232,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,2.5648244150257,30.3094960102945,54.2892369807656,0,0,0,0,0,0.354668382198357,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.621966330092223,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.241011029883482,0.661763836394364,0.217879444092406,0.71181185733329,0.808987848960987,0.392442930250692,1.15424147083917,0.738155454624648,0,0,0,0,0,1.77236972004421,9.27072508770766,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.492434012174795,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0,3.25046917581229,4.53170748464433,18.5439714379185,11.0375011200584,0,0,0.773288812777695,0.837581326671744,3.18969375826582,51.6814846523556,176.505260930375,27.7658394002144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,23.5128478892292,16.0091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,3.04468565539302,1.52927441428475,4.5571774973933,2.62054953003568,1.64544909234478,2.59389324477087,0.540031437238115,3.17250070517708,0,0,0,0.557409525377156,1.15415370381156,1.4939787103167,0.478278818186467,0.399158742865633,0.191505370132367,0,0,0.280797178113459,0,0.313359791546046,0,0,1.76646882614069,2.01799707191048,1.70338495076131,1.71752672377882,0.614481528616916,0,0.166849141711909,2.34465714482448,0,0,0,0.66614393599564,1.4098700508785,0,0.586032717087576,0,2.34031106982705,0,0.23874448473769,0,0,0,0.140669416410513,0.667852230137435,0,0,1.9924798825107,1.93398740871803,0,0.409074730008619,0.738508832766417,0,0.0898683511473268,0,0,1.87422470710174,23.948309234694,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0.689486746482929,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,12.2631957834884,0,0,0,0,0,0,0,0.632994193584081,0,0,0.216388639742091,0,0.442287822516696,0.611030144933625,0.593042257361244,1.48276726735803,1.14864144456001,0.134802265961354,0.802577647298789,0.468528891450678,5.10873409803865,0,0,0,1.20990716048664,1.22429104652196,0.31593289814244,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.580537987734511,0.365446585430928,0.410577285266046,0.969890164884194,0,1.35588444468319,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0.17159499786196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| |||
|short_description=p2@CXCR4 | |||
}} |
Latest revision as of 02:54, 17 September 2015
Short description: | p2@CXCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CXCR4_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 0bp_to_AY826773_5end |
EntrezGene: | CXCR4 |
HGNC: | 2561 |
UniProt: | Q5MIL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.02e-32 | 98 |
blood island | 4.02e-32 | 98 |
hemolymphoid system | 4.52e-31 | 108 |
immune system | 1.01e-21 | 93 |
bone marrow | 2.57e-18 | 76 |
bone element | 4.81e-16 | 82 |
skeletal element | 1.61e-13 | 90 |
lateral plate mesoderm | 3.40e-12 | 203 |
blood | 1.21e-11 | 15 |
haemolymphatic fluid | 1.21e-11 | 15 |
organism substance | 1.21e-11 | 15 |
skeletal system | 5.51e-11 | 100 |
connective tissue | 3.73e-10 | 371 |