FFCP PHASE1:Hg19::chr13:31736027..31736053,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:31736027..31736053,-
|short_description=p1@HSPH1
|description=CAGE_peak_1_at_HSPH1_5end
|association_with_transcript=0bp_to_ENST00000380363_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10808 | |EntrezGene=10808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16969 | |HGNC=16969 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3D7 | |UniProt=F2Z3D7 | ||
|association_with_transcript=0bp_to_ENST00000380363_5end | |||
|cluster_id=chr13:31736027..31736053,- | |||
|coexpression_cluster_id=C411 | |||
|description=CAGE_peak_1_at_HSPH1_5end | |||
|id=chr13:31736027..31736053,- | |||
|ontology_enrichment_celltype=CL:0000557!1.80e-08!71;CL:0002032!4.08e-08!165;CL:0000837!4.08e-08!165;CL:0002031!7.31e-08!124;CL:0000839!7.36e-08!70;CL:0000763!8.09e-08!112;CL:0000049!8.09e-08!112;CL:0000037!4.19e-07!172;CL:0000566!4.19e-07!172;CL:0002009!7.09e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.30e-08;33!CL:0002057;3.30e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.90e-08,67;CL:0002032,5.55e-08,161;CL:0000837,5.55e-08,161;CL:0000839,8.00e-08,66;CL:0002031,9.51e-08,120;CL:0000763,1.03e-07,108;CL:0000049,1.03e-07,108;CL:0000037,5.71e-07,168;CL:0002009,7.89e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.97e-08!239;DOID:162!3.22e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.97e-08,239;DOID:162,3.22e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003080!8.73e-12!42;UBERON:0002780!3.07e-11!41;UBERON:0001890!3.07e-11!41;UBERON:0006240!3.07e-11!41;UBERON:0001049!4.16e-11!57;UBERON:0005068!4.16e-11!57;UBERON:0006241!4.16e-11!57;UBERON:0007135!4.16e-11!57;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0001893!4.88e-09!34;UBERON:0002791!1.14e-08!33;UBERON:0002616!1.25e-08!59;UBERON:0000955!1.98e-08!69;UBERON:0006238!1.98e-08!69;UBERON:0001869!2.16e-08!32;UBERON:0001017!3.58e-08!82;UBERON:0000073!3.91e-08!94;UBERON:0001016!3.91e-08!94;UBERON:0005743!1.51e-07!86;UBERON:0007023!2.93e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.00e-08;41!UBERON:0001890;3.00e-08;41!UBERON:0003528;4.85e-08;34!UBERON:0002020;4.85e-08;34!UBERON:0001893;6.26e-08;34!UBERON:0002791;7.92e-08;32!UBERON:0001869;1.13e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.07e-11,41;UBERON:0001890,3.07e-11,41;UBERON:0003080,3.07e-11,41;UBERON:0006240,3.07e-11,41;UBERON:0001049,1.30e-10,56;UBERON:0005068,1.30e-10,56;UBERON:0006241,1.30e-10,56;UBERON:0007135,1.30e-10,56;UBERON:0000073,2.27e-10,53;UBERON:0002616,2.27e-10,53;UBERON:0003528,2.61e-09,34;UBERON:0002020,2.61e-09,34;UBERON:0001893,4.88e-09,34;UBERON:0002791,1.59e-08,32;UBERON:0001869,2.16e-08,32;UBERON:0001016,2.29e-08,89;UBERON:0000955,5.10e-08,68;UBERON:0006238,5.10e-08,68;UBERON:0001017,8.67e-08,81;UBERON:0007023,5.12e-07,114 | |||
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1 | ||
|short_description=p1@HSPH1 | |||
}} | }} |
Latest revision as of 03:09, 17 September 2015
Short description: | p1@HSPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSPH1_5end |
Coexpression cluster: | C411_vagina_Mast_breast_heart_CD14_aorta_liver |
Association with transcript: | 0bp_to_ENST00000380363_5end |
EntrezGene: | HSPH1 |
HGNC: | 16969 |
UniProt: | F2Z3D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.90e-08 | 67 |
hematopoietic oligopotent progenitor cell | 5.55e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.55e-08 | 161 |
myeloid lineage restricted progenitor cell | 8.00e-08 | 66 |
hematopoietic lineage restricted progenitor cell | 9.51e-08 | 120 |
myeloid cell | 1.03e-07 | 108 |
common myeloid progenitor | 1.03e-07 | 108 |
hematopoietic stem cell | 5.71e-07 | 168 |
macrophage dendritic cell progenitor | 7.89e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.07e-11 | 41 |
forebrain | 3.07e-11 | 41 |
anterior neural tube | 3.07e-11 | 41 |
future forebrain | 3.07e-11 | 41 |
neural tube | 1.30e-10 | 56 |
neural rod | 1.30e-10 | 56 |
future spinal cord | 1.30e-10 | 56 |
neural keel | 1.30e-10 | 56 |
regional part of nervous system | 2.27e-10 | 53 |
regional part of brain | 2.27e-10 | 53 |
brain grey matter | 2.61e-09 | 34 |
gray matter | 2.61e-09 | 34 |
telencephalon | 4.88e-09 | 34 |
regional part of telencephalon | 1.59e-08 | 32 |
cerebral hemisphere | 2.16e-08 | 32 |
nervous system | 2.29e-08 | 89 |
brain | 5.10e-08 | 68 |
future brain | 5.10e-08 | 68 |
central nervous system | 8.67e-08 | 81 |
adult organism | 5.12e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.97e-08 | 239 |
cancer | 3.22e-07 | 235 |