FFCP PHASE1:Hg19::chr1:153175900..153175912,+: Difference between revisions
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|id=chr1:153175900..153175912,+
|short_description=p1@LELP1
|description=CAGE_peak_1_at_LELP1_5end
|association_with_transcript=-6bp_to_ENST00000368747,NM_001010857...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149018 | |EntrezGene=149018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32046 | |HGNC=32046 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T871 | |UniProt=Q5T871 | ||
|association_with_transcript=-6bp_to_ENST00000368747,NM_001010857,uc001fbl.2_5end | |||
|cluster_id=chr1:153175900..153175912,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LELP1_5end | |||
|id=chr1:153175900..153175912,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.18e-26;2!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.54e-43!11;UBERON:0006947!1.14e-40!3;UBERON:0004054!1.14e-40!3;UBERON:0005904!1.05e-30!4;UBERON:0000473!3.98e-27!8;UBERON:0003101!1.06e-21!22;UBERON:0000079!1.06e-21!22;UBERON:0001301!7.13e-15!1;UBERON:0001000!8.17e-15!1;UBERON:0005352!8.17e-15!1;UBERON:0000998!1.23e-14!1;UBERON:0006868!1.23e-14!1;UBERON:0002336!2.41e-14!1;UBERON:0001018!2.41e-14!1;UBERON:0002473!2.41e-14!1;UBERON:0005340!2.41e-14!1;UBERON:0002316!2.41e-14!1;UBERON:0003544!2.41e-14!1;UBERON:0001020!2.41e-14!1;UBERON:0005970!2.41e-14!1;UBERON:0002437!2.41e-14!1;UBERON:0000991!1.57e-10!21;UBERON:0009196!1.57e-10!21;UBERON:0009117!1.57e-10!21;UBERON:0005564!1.57e-10!21;UBERON:0007023!2.18e-10!115;UBERON:0004176!4.61e-10!22;UBERON:0003133!8.49e-10!48;UBERON:0005156!6.61e-08!59;UBERON:0000990!6.61e-08!59;UBERON:0002360!7.03e-08!2;UBERON:0000094!7.03e-08!2;UBERON:0007645!7.03e-08!2;UBERON:0005162!8.04e-08!2;UBERON:0000122!8.04e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;6.58e-50;1!UBERON:0003135;4.67e-41;11!UBERON:0000473;8.65e-26;8!UBERON:0003101;4.27e-21;22!UBERON:0000079;4.27e-21;22!UBERON:0006947;1.12e-17;3!UBERON:0004054;1.12e-17;3!UBERON:0005904;1.29e-13;4!UBERON:0000991;1.53e-10;21!UBERON:0003133;1.92e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.58e-50,1;UBERON:0003135,4.67e-41,11;UBERON:0000473,8.65e-26,8;UBERON:0003101,4.27e-21,22;UBERON:0000079,4.27e-21,22;UBERON:0006947,1.12e-17,3;UBERON:0004054,1.12e-17,3;UBERON:0005904,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0003133,3.42e-10,48;UBERON:0004176,4.14e-10,22;UBERON:0003886,3.71e-09,54;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0002553,3.34e-08,61;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p1@LELP1 | |||
}} | }} |
Latest revision as of 04:43, 17 September 2015
Short description: | p1@LELP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LELP1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -6bp_to_ENST00000368747, NM_001010857, uc001fbl.2_5end |
EntrezGene: | LELP1 |
HGNC: | 32046 |
UniProt: | Q5T871 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 6.58e-50 | 1 |
male reproductive organ | 4.67e-41 | 11 |
testis | 8.65e-26 | 8 |
male organism | 4.27e-21 | 22 |
male reproductive system | 4.27e-21 | 22 |
male genital duct | 1.12e-17 | 3 |
internal male genitalia | 1.12e-17 | 3 |
duct of male reproductive system | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
reproductive organ | 3.42e-10 | 48 |
external genitalia | 4.14e-10 | 22 |
body cavity precursor | 3.71e-09 | 54 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
anatomical cavity | 3.34e-08 | 61 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |