FFCP PHASE1:Hg19::chr12:125398586..125398597,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7316 | |EntrezGene=7316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12468 | |HGNC=12468 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000544481_5end | |association_with_transcript=13bp_to_ENST00000544481_5end | ||
|cluster_id=chr12:125398586..125398597,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_UBC_5end | |description=CAGE_peak_13_at_UBC_5end | ||
|id=chr12:125398586..125398597,- | |id=chr12:125398586..125398597,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;9.10e-12;1!DOID:4549;9.10e-12;1!DOID:5861;9.10e-12;1!DOID:6496;9.10e-12;1!DOID:6193;9.10e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.76e-12,1;DOID:4549,7.76e-12,1;DOID:5861,7.76e-12,1;DOID:6496,7.76e-12,1;DOID:6193,1.81e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.75e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;9.10e-12;1!UBERON:0000026;9.10e-12;1!UBERON:0008784;9.10e-12;1!UBERON:0006058;9.10e-12;1!UBERON:0003663;9.10e-12;1!UBERON:0004256;9.10e-12;1!UBERON:0004708;9.10e-12;1!UBERON:0002101;9.10e-12;1!UBERON:0004709;9.10e-12;1!UBERON:0002529;9.10e-12;1!UBERON:0010538;9.10e-12;1!UBERON:0003661;9.10e-12;1!UBERON:0010890;9.10e-12;1!UBERON:0002471;9.10e-12;1!UBERON:0001383;9.10e-12;1!UBERON:0010758;9.10e-12;1!UBERON:0010707;9.10e-12;1!UBERON:0000978;9.10e-12;1!UBERON:0002103;9.10e-12;1!UBERON:0001665;9.10e-12;1!UBERON:0003823;9.10e-12;1!UBERON:0000154;9.10e-12;1!UBERON:0010709;9.10e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,8.64e-12,1;UBERON:0001389,8.64e-12,1;UBERON:0000026,8.64e-12,1;UBERON:0008784,8.64e-12,1;UBERON:0006058,8.64e-12,1;UBERON:0003663,8.64e-12,1;UBERON:0004256,8.64e-12,1;UBERON:0004708,8.64e-12,1;UBERON:0002101,8.64e-12,1;UBERON:0004709,8.64e-12,1;UBERON:0002529,8.64e-12,1;UBERON:0010538,8.64e-12,1;UBERON:0003661,8.64e-12,1;UBERON:0010890,8.64e-12,1;UBERON:0002471,8.64e-12,1;UBERON:0001383,8.64e-12,1;UBERON:0004357,8.64e-12,1;UBERON:0004347,8.64e-12,1;UBERON:0005420,8.64e-12,1;UBERON:0005732,8.64e-12,1;UBERON:0010758,8.64e-12,1;UBERON:0010707,8.64e-12,1;UBERON:0000978,8.64e-12,1;UBERON:0002103,8.64e-12,1;UBERON:0001665,8.64e-12,1;UBERON:0003823,8.64e-12,1;UBERON:0000154,8.64e-12,1;UBERON:0010709,8.64e-12,1;UBERON:0005733,8.64e-12,1;UBERON:0005730,8.64e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.90361775633475,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.94189100137877,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.768251997860379,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,1.16426079513703,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.164254312027618,0,0,0,2.00506470303285,0.276242966807689,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.13345112812495,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,1.03558180854457,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.47748896947538,0,0.307160702099232,0,0,0.333926115068718,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0.41827123283581,0.230850775511391,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0,0.252746318513952,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,1.0319161948297,0,0,0.0821154570532092,0.678923115418936,1.3238419003725,0,0,0,0.189932387867636,0,0.240476460754601,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0.248505071130865,0.471388069233591,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0,0.367182116944987,0,0,0.767660789277781,0,0,0.25426853765475,1.08599920350743,0.864221491201268,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0.513260513652988,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.751145584238999,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0.770479321629213,0,0,0,0.231522474323834,0.244736704506468,0,0.308801447160972,0,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,1.7537427795545,0.398594520940089,0.981392365535065,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.319267718114302,0,0,0.414943514785307,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.397832444232549,0,0,0,0.261906694481422,0,0.147856086217045,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0.351742488719241,0,0.535701835878287,0,0,0,0.0887023701626388,0,0.171488009437418,0.271878931907327,0.0657727735628491,0.590969204419841,0.333694205676207,0.078493092850514,0,0,0,0.215927591218621,12.4215438850633,0.214429632529969,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0.121917924982269,1.29485767437579,1.23195368227496,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.45120521581504,0,0,0.705789743431384,0.0802413666891683,0,0.458729283404541,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,13.1854934899737,16.8817401998392,0,0.20686599172379,1.27940389140589,0,0,0.682821857254437,0.112131862580613,0.0636471582781649,0,0.435433495793923,0,0.404112318087525,0.502055437748735,0.332660356546013,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.90361775633475,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.94189100137877,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.768251997860379,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,1.16426079513703,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.164254312027618,0,0,0,2.00506470303285,0.276242966807689,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.13345112812495,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,1.03558180854457,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.47748896947538,0,0.307160702099232,0,0,0.333926115068718,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0.41827123283581,0.230850775511391,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0,0.252746318513952,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,1.0319161948297,0,0,0.0821154570532092,0.678923115418936,1.3238419003725,0,0,0,0.189932387867636,0,0.240476460754601,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0.248505071130865,0.471388069233591,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0,0.367182116944987,0,0,0.767660789277781,0,0,0.25426853765475,1.08599920350743,0.864221491201268,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0.513260513652988,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.751145584238999,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0.770479321629213,0,0,0,0.231522474323834,0.244736704506468,0,0.308801447160972,0,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,1.7537427795545,0.398594520940089,0.981392365535065,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.319267718114302,0,0,0.414943514785307,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.397832444232549,0,0,0,0.261906694481422,0,0.147856086217045,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0.351742488719241,0,0.535701835878287,0,0,0,0.0887023701626388,0,0.171488009437418,0.271878931907327,0.0657727735628491,0.590969204419841,0.333694205676207,0.078493092850514,0,0,0,0.215927591218621,12.4215438850633,0.214429632529969,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0.121917924982269,1.29485767437579,1.23195368227496,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.45120521581504,0,0,0.705789743431384,0.0802413666891683,0,0.458729283404541,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,13.1854934899737,16.8817401998392,0,0.20686599172379,1.27940389140589,0,0,0.682821857254437,0.112131862580613,0.0636471582781649,0,0.435433495793923,0,0.404112318087525,0.502055437748735,0.332660356546013,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p13@UBC | |short_description=p13@UBC | ||
}} | }} |
Latest revision as of 04:45, 17 September 2015
Short description: | p13@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_UBC_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 13bp_to_ENST00000544481_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 8.64e-12 | 1 |
soleus muscle | 8.64e-12 | 1 |
appendage | 8.64e-12 | 1 |
lower limb segment | 8.64e-12 | 1 |
multi-limb segment region | 8.64e-12 | 1 |
hindlimb muscle | 8.64e-12 | 1 |
hindlimb zeugopod muscle | 8.64e-12 | 1 |
paired limb/fin | 8.64e-12 | 1 |
limb | 8.64e-12 | 1 |
pelvic appendage | 8.64e-12 | 1 |
limb segment | 8.64e-12 | 1 |
paired limb/fin segment | 8.64e-12 | 1 |
limb muscle | 8.64e-12 | 1 |
pelvic complex muscle | 8.64e-12 | 1 |
zeugopod | 8.64e-12 | 1 |
muscle of leg | 8.64e-12 | 1 |
paired limb/fin bud | 8.64e-12 | 1 |
limb bud | 8.64e-12 | 1 |
pelvic appendage bud | 8.64e-12 | 1 |
limb/fin field | 8.64e-12 | 1 |
subdivision of organism along appendicular axis | 8.64e-12 | 1 |
appendage girdle complex | 8.64e-12 | 1 |
leg | 8.64e-12 | 1 |
hindlimb | 8.64e-12 | 1 |
triceps surae | 8.64e-12 | 1 |
hindlimb zeugopod | 8.64e-12 | 1 |
posterior region of body | 8.64e-12 | 1 |
pelvic complex | 8.64e-12 | 1 |
limb field | 8.64e-12 | 1 |
hindlimb/pelvic fin field | 8.64e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.76e-12 | 1 |
extraosseous chondrosarcoma | 7.76e-12 | 1 |
myxoid chondrosarcoma | 7.76e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 7.76e-12 | 1 |
epithelioid sarcoma | 1.81e-11 | 1 |