FFCP PHASE1:Hg19::chr19:3178814..3178835,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:3178814..3178835,+
|short_description=p2@S1PR4
|description=CAGE_peak_2_at_S1PR4_5end
|association_with_transcript=44bp_to_AJ000479_5end
|EntrezGene=8698...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8698 | |EntrezGene=8698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3170 | |HGNC=3170 | ||
|TSSclassifier=strong | |||
|UniProt=O95977 | |UniProt=O95977 | ||
|association_with_transcript=44bp_to_AJ000479_5end | |||
|cluster_id=chr19:3178814..3178835,+ | |||
|coexpression_cluster_id=C590 | |||
|description=CAGE_peak_2_at_S1PR4_5end | |||
|id=chr19:3178814..3178835,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.20e-76!172;CL:0000566!1.20e-76!172;CL:0000988!1.53e-74!182;CL:0002032!2.40e-70!165;CL:0000837!2.40e-70!165;CL:0000738!3.93e-63!140;CL:0002087!1.91e-60!119;CL:0002031!3.74e-53!124;CL:0000542!3.21e-42!53;CL:0000051!3.21e-42!53;CL:0000838!2.22e-41!52;CL:0000763!1.03e-28!112;CL:0000049!1.03e-28!112;CL:0002057!1.56e-22!42;CL:0000766!5.20e-21!76;CL:0000860!3.00e-20!45;CL:0000945!3.22e-20!24;CL:0000826!3.22e-20!24;CL:0000791!5.49e-20!18;CL:0000789!5.49e-20!18;CL:0002420!5.49e-20!18;CL:0002419!5.49e-20!18;CL:0000790!5.49e-20!18;CL:0000084!1.95e-19!25;CL:0000827!1.95e-19!25;CL:0002194!1.68e-17!63;CL:0000576!1.68e-17!63;CL:0000040!1.68e-17!63;CL:0000559!1.68e-17!63;CL:0000134!2.14e-17!358;CL:0000236!4.69e-17!14;CL:0002009!1.41e-16!65;CL:0000839!2.14e-16!70;CL:0002320!2.14e-16!365;CL:0000557!3.34e-15!71;CL:0000625!2.12e-13!11;CL:0000219!6.09e-13!390;CL:0002393!4.73e-10!9;CL:0002397!4.73e-10!9;CL:0000034!4.69e-09!444;CL:0000048!5.15e-09!430;CL:0000094!8.52e-09!8;CL:0000723!1.76e-08!436;CL:0000624!1.99e-07!6;CL:0000081!2.69e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.48e-28;18!CL:0000789;2.48e-28;18!CL:0002419;2.48e-28;18!CL:0000084;3.54e-26;25!CL:0000542;4.47e-26;53!CL:0000236;2.17e-23;13!CL:0000625;9.41e-19;11!CL:0002087;8.81e-13;104!CL:0000945;1.69e-12;24!CL:0000988;2.70e-11;177!CL:0000624;3.86e-10;6!CL:0000094;8.94e-10;8!CL:0000738;2.69e-09;136!CL:0000875;6.85e-07;3!CL:0002396;6.85e-07;3!CL:0000081;8.87e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.73e-53,168;CL:0000988,1.27e-50,177;CL:0002032,1.11e-48,161;CL:0000837,1.11e-48,161;CL:0000542,3.31e-41,53;CL:0000051,3.31e-41,53;CL:0000738,2.49e-40,136;CL:0000838,4.74e-40,52;CL:0002087,1.21e-37,115;CL:0002031,8.34e-30,120;CL:0000791,2.72e-28,18;CL:0000789,2.72e-28,18;CL:0002420,2.72e-28,18;CL:0002419,2.72e-28,18;CL:0000790,2.72e-28,18;CL:0000084,3.64e-26,25;CL:0000827,3.64e-26,25;CL:0000236,1.85e-21,14;CL:0000625,1.01e-18,11;CL:0000763,2.47e-14,108;CL:0000049,2.47e-14,108;CL:0000134,3.00e-13,354;CL:0002320,1.40e-12,361;CL:0000945,1.81e-12,24;CL:0000826,1.81e-12,24;CL:0000219,2.90e-10,386;CL:0000624,4.54e-10,6;CL:0000094,9.63e-10,8;CL:0002393,2.53e-09,9;CL:0002397,2.53e-09,9;CL:0000034,5.68e-08,441;CL:0000048,1.60e-07,427;CL:0000766,2.00e-07,72;CL:0000723,3.72e-07,433;CL:0000860,4.41e-07,42;CL:0002057,4.41e-07,42;CL:0000875,6.60e-07,3;CL:0002396,6.60e-07,3;CL:0000081,9.33e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.48e-28;18!CL:0000051;4.47e-26;53 | |||
|ontology_enrichment_disease=DOID:2531!7.42e-12!51;DOID:0060083!7.42e-12!51;DOID:1240!4.94e-10!39;DOID:8692!3.28e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.29e-10;39!DOID:8692;1.95e-08;31!DOID:2531;4.70e-08;51!DOID:0060083;4.70e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.46e-12,39;DOID:2531,2.66e-11,51;DOID:0060083,2.66e-11,51;DOID:8692,5.21e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-28!102;UBERON:0003061!2.56e-28!102;UBERON:0002193!5.39e-26!112;UBERON:0000178!1.54e-16!15;UBERON:0000179!1.54e-16!15;UBERON:0000463!1.54e-16!15;UBERON:0002384!4.81e-15!375;UBERON:0002371!1.01e-13!80;UBERON:0001474!6.82e-12!86;UBERON:0002405!4.16e-11!115;UBERON:0004765!2.14e-08!101;UBERON:0001434!2.14e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.79e-18;15!UBERON:0000179;3.79e-18;15!UBERON:0000463;3.79e-18;15!UBERON:0002390;5.31e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.70e-18,15;UBERON:0000179,3.70e-18,15;UBERON:0000463,3.70e-18,15;UBERON:0002390,4.76e-12,98;UBERON:0003061,4.76e-12,98;UBERON:0002384,1.12e-11,371;UBERON:0002193,8.17e-11,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,3.54027849164014,1.15148819429164,0.464448369948228,0,0,0,0.309868802321207,0.853015394924529,2.05520307534393,1.10799081706375,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0,3.19876125315042,2.64513160582167,2.91100873425379,0.464858073811369,0.411167888021826,0.309706370895104,0,0.512321413058201,0.945928919554341,0.689491361473237,1.29096936716765,0,1.88242339542605,1.09162460023138,0.674170453335254,0.306083892370903,0.962787081228281,0.639337125799041,1.64925650093358,1.59570926097305,3.40979800426155,0,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,0,2.21523671208619,5.0701268714866,11.4806321981124,4.40283155567589,0.898629049171961,0.901061357049038,0.48217676009124,13.6806116995799,20.6873344287054,14.6131323011707,17.5996244461323,25.6685147293202,29.3538053774973,25.6038133539904,22.4221752740167,19.5415829584524,22.4755256746853,14.3108063180305,5.12291672198504,4.69789751496751,10.7036503875064,2.64342657158052,3.92355994087075,4.21414535640123,2.360517241366,2.35806457649499,3.08402248499264,21.2326849146161,7.49621213257258,6.62826928028627,7.79306913631645,21.5022181788385,12.9626599288928,22.1533894583621,11.6445661418957,28.8205469382769,24.1910386461374,8.22189523018381,12.4357508003632,6.37566788617116,3.26230438956533,2.94294910898684,3.1360657141493,13.0305744102201,6.51474839123266,12.7142154828573,2.78321661221453,9.2383970153988,11.0684187155591,13.3063286222772,8.58278178743305,7.16725022464743,9.99445812418767,9.94464458584871,6.56902397536837,6.04820229674197,5.34880391567015,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,1.62273696827342,0.870648686496336,0.930705723632056,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,3.74358444383662,1.94064817373566,1.28343036279748,0,0,0,0,0,1.49801404789436,11.966458368161,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,2.80428461064202,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,15.7308758861972,12.234195314278,17.659062802399,8.81457569193819,16.4544909234478,14.2664128462398,12.4207230564766,16.6556287021797,0,0,0,1.67222857613147,3.60673032441112,0.142283686696828,0,1.79621434289535,4.21311814291207,3.38677732358213,4.86932910411833,4.7735520279288,0,1.56679895773023,0,3.55512733383367,5.62058262862948,1.61439765752838,2.12923118845163,1.03051603426729,0,0,0,1.56310476321632,0,0,1.35227839237992,0,4.22961015263549,0,0,0,4.23484860254418,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,1.10776324914963,0,0,0,0,0,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72678282034527,0.997270091400938,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0.611030144933625,0.889563386041866,1.23563938946503,0.835375596043643,0,0,0,4.37891494117598,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,2.89176089707246,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59971010466339,1.8137594048004,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23333154505139,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.939839179798536,1.67590508731301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.710478008196067,0.620747142958579,0,0,0,0,0,1.48174516632093,0.0717222053926763,0,0,0,0,0,0,0,0,0,2.01273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,3.54027849164014,1.15148819429164,0.464448369948228,0,0,0,0.309868802321207,0.853015394924529,2.05520307534393,1.10799081706375,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0,3.19876125315042,2.64513160582167,2.91100873425379,0.464858073811369,0.411167888021826,0.309706370895104,0,0.512321413058201,0.945928919554341,0.689491361473237,1.29096936716765,0,1.88242339542605,1.09162460023138,0.674170453335254,0.306083892370903,0.962787081228281,0.639337125799041,1.64925650093358,1.59570926097305,3.40979800426155,0,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,0,2.21523671208619,5.0701268714866,11.4806321981124,4.40283155567589,0.898629049171961,0.901061357049038,0.48217676009124,13.6806116995799,20.6873344287054,14.6131323011707,17.5996244461323,25.6685147293202,29.3538053774973,25.6038133539904,22.4221752740167,19.5415829584524,22.4755256746853,14.3108063180305,5.12291672198504,4.69789751496751,10.7036503875064,2.64342657158052,3.92355994087075,4.21414535640123,2.360517241366,2.35806457649499,3.08402248499264,21.2326849146161,7.49621213257258,6.62826928028627,7.79306913631645,21.5022181788385,12.9626599288928,22.1533894583621,11.6445661418957,28.8205469382769,24.1910386461374,8.22189523018381,12.4357508003632,6.37566788617116,3.26230438956533,2.94294910898684,3.1360657141493,13.0305744102201,6.51474839123266,12.7142154828573,2.78321661221453,9.2383970153988,11.0684187155591,13.3063286222772,8.58278178743305,7.16725022464743,9.99445812418767,9.94464458584871,6.56902397536837,6.04820229674197,5.34880391567015,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,1.62273696827342,0.870648686496336,0.930705723632056,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,3.74358444383662,1.94064817373566,1.28343036279748,0,0,0,0,0,1.49801404789436,11.966458368161,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,2.80428461064202,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,15.7308758861972,12.234195314278,17.659062802399,8.81457569193819,16.4544909234478,14.2664128462398,12.4207230564766,16.6556287021797,0,0,0,1.67222857613147,3.60673032441112,0.142283686696828,0,1.79621434289535,4.21311814291207,3.38677732358213,4.86932910411833,4.7735520279288,0,1.56679895773023,0,3.55512733383367,5.62058262862948,1.61439765752838,2.12923118845163,1.03051603426729,0,0,0,1.56310476321632,0,0,1.35227839237992,0,4.22961015263549,0,0,0,4.23484860254418,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,1.10776324914963,0,0,0,0,0,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72678282034527,0.997270091400938,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0.611030144933625,0.889563386041866,1.23563938946503,0.835375596043643,0,0,0,4.37891494117598,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,2.89176089707246,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59971010466339,1.8137594048004,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23333154505139,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.939839179798536,1.67590508731301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.710478008196067,0.620747142958579,0,0,0,0,0,1.48174516632093,0.0717222053926763,0,0,0,0,0,0,0,0,0,2.01273793591026,0.320568492303233 | ||
|short_description=p2@S1PR4 | |||
}} | }} |
Latest revision as of 05:03, 17 September 2015
Short description: | p2@S1PR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S1PR4_5end |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | 44bp_to_AJ000479_5end |
EntrezGene: | S1PR4 |
HGNC: | 3170 |
UniProt: | O95977 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.70e-18 | 15 |
haemolymphatic fluid | 3.70e-18 | 15 |
organism substance | 3.70e-18 | 15 |
hematopoietic system | 4.76e-12 | 98 |
blood island | 4.76e-12 | 98 |
connective tissue | 1.12e-11 | 371 |
hemolymphoid system | 8.17e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.46e-12 | 39 |
hematologic cancer | 2.66e-11 | 51 |
immune system cancer | 2.66e-11 | 51 |
myeloid leukemia | 5.21e-09 | 31 |