FFCP PHASE1:Hg19::chr5:176433350..176433388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51720 | |EntrezGene=51720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30298 | |HGNC=30298 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000417486_5end | |association_with_transcript=0bp_to_ENST00000417486_5end | ||
|cluster_id=chr5:176433350..176433388,- | |||
|coexpression_cluster_id=C2046 | |||
|description=CAGE_peak_6_at_UIMC1_5end | |description=CAGE_peak_6_at_UIMC1_5end | ||
|id=chr5:176433350..176433388,- | |id=chr5:176433350..176433388,- | ||
|ontology_enrichment_celltype=CL:0002139!1.91e-16!24;CL:0000213!4.33e-13!57;CL:0000215!4.33e-13!57;CL:0000115!4.55e-13!35;CL:0000071!4.57e-12!18;CL:0002546!4.57e-12!18;CL:0002078!1.14e-10!44;CL:0000222!7.17e-07!119 | |ontology_enrichment_celltype=CL:0002139!1.91e-16!24;CL:0000213!4.33e-13!57;CL:0000215!4.33e-13!57;CL:0000115!4.55e-13!35;CL:0000071!4.57e-12!18;CL:0002546!4.57e-12!18;CL:0002078!1.14e-10!44;CL:0000222!7.17e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.94e-59;24!CL:0000115;2.12e-42;36!CL:0000071;1.87e-41;18!CL:0002078;3.09e-28;45!CL:0000213;5.16e-22;58!CL:0000215;5.16e-22;58!CL:0002138;6.06e-19;6!CL:0002543;2.26e-18;6!CL:1000413;1.51e-16;9!CL:0002544;2.45e-13;6!CL:0002618;1.12e-10;3!CL:0002144;1.63e-10;3!CL:0000076;4.92e-08;63!CL:0002545;2.23e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.35e-59,24;CL:0000115,1.57e-52,36;CL:0002078,6.88e-44,45;CL:0000071,9.47e-42,18;CL:0002546,9.47e-42,18;CL:0000213,1.74e-37,58;CL:0000215,1.74e-37,58;CL:0005020,6.78e-19,6;CL:0002138,6.78e-19,6;CL:0005022,6.78e-19,6;CL:0002543,1.10e-18,6;CL:1000413,1.34e-16,9;CL:0000222,5.45e-15,121;CL:0002544,2.30e-13,6;CL:0000076,6.03e-13,63;CL:0002618,1.08e-10,3;CL:0002144,1.84e-10,3;CL:0002545,2.21e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.87e-41;18!CL:0005022;6.06e-19;6!UBERON:0005062;7.27e-07;4!UBERON:0007284;7.27e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.57e-12!18;UBERON:0004638!4.57e-12!18;UBERON:0004852!4.57e-12!18;UBERON:0001009!2.55e-10!113;UBERON:0000025!1.31e-09!194;UBERON:0004535!2.26e-09!110;UBERON:0004111!3.53e-09!241;UBERON:0000487!4.97e-09!22;UBERON:0003914!6.69e-09!118;UBERON:0004872!8.35e-09!84;UBERON:0000468!1.09e-08!659;UBERON:0000055!1.95e-08!69;UBERON:0007023!4.06e-08!115;UBERON:0002049!7.57e-08!79;UBERON:0007798!7.57e-08!79;UBERON:0000467!9.93e-08!625;UBERON:0000480!1.39e-07!626;UBERON:0006914!1.66e-07!25;UBERON:0003103!3.24e-07!69;UBERON:0000477!4.93e-07!286;UBERON:0001981!7.87e-07!60;UBERON:0007500!7.87e-07!60;UBERON:0004537!7.87e-07!60;UBERON:0006965!7.87e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.87e-41;18!UBERON:0001986;1.87e-41;18!UBERON:0004852;1.87e-41;18!UBERON:0000487;4.18e-33;22!UBERON:0006914;1.34e-28;25!UBERON:0000490;1.58e-18;33!UBERON:0003915;1.51e-16;9!UBERON:0004700;1.51e-16;9!UBERON:0001917;1.51e-16;9!UBERON:0001473;5.26e-14;8!UBERON:0004536;5.26e-14;8!UBERON:0006558;5.26e-14;8!UBERON:0000055;8.64e-13;65!UBERON:0001638;5.47e-12;9!UBERON:0003920;5.47e-12;9!UBERON:0004582;5.47e-12;9!UBERON:0002465;4.86e-11;10!UBERON:0010523;1.63e-10;3!UBERON:0001915;1.63e-10;3!UBERON:0001982;1.63e-10;3!UBERON:0004535;1.90e-10;109!UBERON:0007500;2.17e-09;56!UBERON:0001981;2.17e-09;56!UBERON:0004537;2.17e-09;56!UBERON:0003978;5.07e-09;3!UBERON:0000946;5.07e-09;3!UBERON:0000948;6.31e-09;22!UBERON:0002049;1.58e-08;75!UBERON:0007798;1.58e-08;75!UBERON:0001009;4.00e-08;112!UBERON:0007100;1.17e-07;25!UBERON:0003914;1.84e-07;74!UBERON:0005800;2.23e-07;2!UBERON:0001515;2.23e-07;2!UBERON:0000025;6.29e-07;93 | |||
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| ||
|short_description=p6@UIMC1 | |short_description=p6@UIMC1 | ||
}} | }} |
Latest revision as of 05:22, 17 September 2015
Short description: | p6@UIMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UIMC1_5end |
Coexpression cluster: | C2046_Lymphatic_Endothelial_Neutrophils_Renal_heart_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_ENST00000417486_5end |
EntrezGene: | UIMC1 |
HGNC: | 30298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.35e-59 | 24 |
endothelial cell | 1.57e-52 | 36 |
meso-epithelial cell | 6.88e-44 | 45 |
blood vessel endothelial cell | 9.47e-42 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.47e-42 | 18 |
lining cell | 1.74e-37 | 58 |
barrier cell | 1.74e-37 | 58 |
lymphangioblast | 6.78e-19 | 6 |
endothelial cell of lymphatic vessel | 6.78e-19 | 6 |
vascular lymphangioblast | 6.78e-19 | 6 |
vein endothelial cell | 1.10e-18 | 6 |
endothelial cell of artery | 1.34e-16 | 9 |
mesodermal cell | 5.45e-15 | 121 |
aortic endothelial cell | 2.30e-13 | 6 |
squamous epithelial cell | 6.03e-13 | 63 |
endothelial cell of umbilical vein | 1.08e-10 | 3 |
capillary endothelial cell | 1.84e-10 | 3 |
thoracic aorta endothelial cell | 2.21e-07 | 2 |