FFCP PHASE1:Hg19::chr1:27961687..27961704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2268 | |EntrezGene=2268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3697 | |HGNC=3697 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3M4,P09769 | |UniProt=F5H3M4,P09769 | ||
|association_with_transcript=22bp_to_ENST00000545953,NM_005248,uc001bom.2_5end | |association_with_transcript=22bp_to_ENST00000545953,NM_005248,uc001bom.2_5end | ||
|cluster_id=chr1:27961687..27961704,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_FGR_5end | |description=CAGE_peak_2_at_FGR_5end | ||
|id=chr1:27961687..27961704,- | |id=chr1:27961687..27961704,- | ||
|ontology_enrichment_celltype=CL:0000738!1.36e-59!140;CL:0000766!4.65e-56!76;CL:0000557!4.77e-50!71;CL:0002031!1.24e-49!124;CL:0000037!2.34e-49!172;CL:0000566!2.34e-49!172;CL:0000839!1.86e-47!70;CL:0002087!2.39e-47!119;CL:0002032!5.28e-46!165;CL:0000837!5.28e-46!165;CL:0002009!6.52e-46!65;CL:0002194!5.06e-45!63;CL:0000576!5.06e-45!63;CL:0000040!5.06e-45!63;CL:0000559!5.06e-45!63;CL:0000988!4.65e-44!182;CL:0000763!1.84e-40!112;CL:0000049!1.84e-40!112;CL:0002057!2.60e-40!42;CL:0000860!1.85e-37!45;CL:0002393!1.13e-09!9;CL:0002397!1.13e-09!9;CL:0000094!1.43e-08!8;CL:0000134!4.16e-08!358;CL:0002320!2.43e-07!365;CL:0000838!6.90e-07!52 | |ontology_enrichment_celltype=CL:0000738!1.36e-59!140;CL:0000766!4.65e-56!76;CL:0000557!4.77e-50!71;CL:0002031!1.24e-49!124;CL:0000037!2.34e-49!172;CL:0000566!2.34e-49!172;CL:0000839!1.86e-47!70;CL:0002087!2.39e-47!119;CL:0002032!5.28e-46!165;CL:0000837!5.28e-46!165;CL:0002009!6.52e-46!65;CL:0002194!5.06e-45!63;CL:0000576!5.06e-45!63;CL:0000040!5.06e-45!63;CL:0000559!5.06e-45!63;CL:0000988!4.65e-44!182;CL:0000763!1.84e-40!112;CL:0000049!1.84e-40!112;CL:0002057!2.60e-40!42;CL:0000860!1.85e-37!45;CL:0002393!1.13e-09!9;CL:0002397!1.13e-09!9;CL:0000094!1.43e-08!8;CL:0000134!4.16e-08!358;CL:0002320!2.43e-07!365;CL:0000838!6.90e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.04e-36;33!CL:0002057;5.04e-36;33!CL:0000473;2.61e-35;39!CL:0000234;2.61e-35;39!CL:0000576;1.75e-32;48!CL:0000766;1.98e-29;69!CL:0000738;8.30e-15;136!CL:0002087;8.95e-15;104!CL:0000763;3.76e-13;100!CL:0000094;2.47e-10;8!CL:0000236;1.25e-08;13!CL:0002393;1.51e-08;6!CL:0002397;1.51e-08;6!CL:0000988;4.19e-08;177!CL:0000235;1.35e-07;6!CL:0000081;6.85e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.31e-71,72;CL:0000738,7.59e-63,136;CL:0000557,4.21e-62,67;CL:0000839,3.65e-59,66;CL:0002194,1.61e-57,59;CL:0000576,1.61e-57,59;CL:0000040,1.61e-57,59;CL:0000559,1.61e-57,59;CL:0002009,5.88e-57,61;CL:0000473,2.00e-56,48;CL:0000234,2.00e-56,48;CL:0002031,1.31e-51,120;CL:0002087,5.26e-51,115;CL:0000860,4.75e-50,42;CL:0002057,4.75e-50,42;CL:0000037,6.94e-48,168;CL:0002032,1.07e-44,161;CL:0000837,1.07e-44,161;CL:0000763,3.37e-44,108;CL:0000049,3.37e-44,108;CL:0000988,1.16e-43,177;CL:0002393,1.08e-11,9;CL:0002397,1.08e-11,9;CL:0000094,2.55e-10,8;CL:0000134,3.24e-09,354;CL:0002320,1.59e-08,361;CL:0000236,8.47e-08,14;CL:0000235,1.36e-07,6;CL:0000081,7.00e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.65e-36;42!CL:0000049;2.91e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.05e-49!102;UBERON:0003061!4.05e-49!102;UBERON:0002193!2.92e-44!112;UBERON:0002371!3.90e-42!80;UBERON:0007023!3.63e-39!115;UBERON:0001474!3.74e-37!86;UBERON:0004765!6.26e-30!101;UBERON:0001434!6.26e-30!101;UBERON:0002405!3.85e-29!115;UBERON:0003081!5.10e-15!216;UBERON:0002204!1.73e-12!167;UBERON:0001049!3.58e-09!57;UBERON:0005068!3.58e-09!57;UBERON:0006241!3.58e-09!57;UBERON:0007135!3.58e-09!57;UBERON:0000479!3.62e-09!787;UBERON:0000178!8.88e-08!15;UBERON:0000179!8.88e-08!15;UBERON:0000463!8.88e-08!15;UBERON:0003080!9.19e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.62e-10;15!UBERON:0000179;9.62e-10;15!UBERON:0000463;9.62e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.78e-60,98;UBERON:0003061,4.78e-60,98;UBERON:0002193,6.12e-55,108;UBERON:0002371,7.67e-52,76;UBERON:0001474,2.86e-46,82;UBERON:0002405,2.23e-45,93;UBERON:0004765,5.05e-40,90;UBERON:0001434,9.97e-35,100;UBERON:0003081,1.94e-23,203;UBERON:0007023,2.33e-22,114;UBERON:0002204,1.36e-15,167;UBERON:0000926,1.99e-10,315;UBERON:0004120,1.99e-10,315;UBERON:0006603,1.99e-10,315;UBERON:0000178,9.60e-10,15;UBERON:0000179,9.60e-10,15;UBERON:0000463,9.60e-10,15;UBERON:0000479,5.34e-08,773;UBERON:0002384,5.43e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,2.36881557818649,1.31360943119913,2.12519109546934,62.5449200189757,36.079963421138,90.2577998932723,0,0,0,0,0.426507697462265,0.293600439334847,166.752617968095,153.617046762129,164.711250873332,13.2110129801555,24.6159186174424,22.9242255194426,99.3069970864427,104.6716364018,106.009234739076,119.468524969522,144.731096583683,144.013462466223,163.696971231304,161.125084406804,131.484119818053,144.103694547907,116.832727728673,112.403983873304,121.981036023608,101.793993971576,83.1476892446813,135.901248212681,124.8413915326,120.19537965022,93.3479179528407,129.850841111682,93.7694451171927,167.160521450064,171.350337856724,150.722984256929,132.910543920817,134.542592952412,124.449208016032,129.555493563541,124.109563327809,128.483729300999,110.064004168522,110.979444581753,99.5878566164785,109.745072630126,106.925947703152,71.5228860802007,116.855224933912,94.2865049923687,82.3815333478499,14.0796995569058,18.5687127829125,16.011166569544,6.82768356106412,12.0118796110804,10.9202963591352,11.8988077101275,9.54053754535364,5.69212969109448,8.80855784056408,6.11637165000366,1.32171328579026,10.0891541336676,0.526768169550154,0.196709770113833,0.393010762749165,1.43921049299656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,3.18565414324097,0,0.950452044448374,5.11955404864427,2.04778577847069,6.24653632761729,6.86654030927649,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.351339142772504,2.81605012320082,0,0,19.1482962256263,15.8458060942333,53.4491001285838,4.05434061319081,5.14795419702115,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,129.144809087342,205.523539998612,0,0,0,0,0,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4057475539532,199.371633898631,99.8801410580254,0,0,0,0,0,0,53.2076296927619,3.60998579454227,4.35389042635621,5.04419836959365,4.67097003677606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.0819878693,16.072226925828,50.6001454759276,0,0,0,0,0,0,0,8.27529192848094,1.07813787429759,7.05886699538616,0,0,0,0,0,126.582187047074,116.67296908957,112.721019654602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.4250127282426,64.4985460447664,53.1503237861153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,6.07941968721561,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,5.27205284349963,0,0,0,0,49.7298657047526,47.4075068428273,72.3451927711186,32.8759850131749,53.8884577742914,51.2293915842247,42.6624835418111,62.6568889272474,0,0,0,0,0,0.782560276832555,0,0,0.191505370132367,0,0,0.280797178113459,0,0.313359791546046,0,0,0,0,4.68430861459359,0,0.921722292925374,0.894704431569664,1.00109485027145,0.976940477010201,0,0,0,0,0,0,8.64398257704175,0,0,0,0.23874448473769,1.18785872333055,0,1.9882952955326,2.11004124615769,0,0,0,1.9924798825107,2.48655523978033,0,0,0.369254416383208,0,0,0,2.55786185113436,1.67693789582787,59.8707730867349,0,1.93866549219044,1.29875337426592,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.60298219312704,0,0.663475559587348,0.591095237907095,0.438770794307945,0,0,1.38510465306835,0,0,0,0,0.638002319463839,0.183195186803725,2.66517388009317,0,0,0.664846727600626,0,0,0,0,0,0,0,0,0,0.995261931078505,0.973033209536731,1.83309043480088,0,0,0,0.741412462787447,1.60515529459758,0,0,0,0,0.789168805698781,0,0,6.44503112210577,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0,0,0.872901148395775,0,0.677942222341597,0,0,0.443175571691151,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,3.01191833562385,6.38732940334862,0,0,4.74780082162832,1.60412296808179,5.74298419661451,1.59743200399193,2.14613024068285,4.24025769139558,1.14211903227435,0,0,0,0,0,0,0,0.795229689809303,2.45166131000836,0,0,0,0.899895566206002,3.86900977278975,0.850493793212345,0,1.57611414598396,1.36381929150995,0,0,0,0,7.28301167401975,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,2.45637617086946,1.85125642439766,0,0,13.6687888086649,4.08731193259131,16.983801269235,18.8543088288541,0,0.60896299190448,0,1.63205341010842,1.0027595760908,2.75711019087115,0.655745261419609,0,0,1.09823638411767,1.6274820991845,3.44045517414043,1.99672292766334,2.85643453530364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,2.39450788585727,1.23069818544453,0,0.899044282034833,1.13032951942296,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,1.01306376927592,0.781078098613847,0.826747186004736,1.45856363445986,0,0.54825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| ||
|short_description=p2@FGR | |short_description=p2@FGR | ||
}} | }} |
Latest revision as of 08:42, 17 September 2015
Short description: | p2@FGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FGR_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 22bp_to_ENST00000545953, NM_005248, uc001bom.2_5end |
EntrezGene: | FGR |
HGNC: | 3697 |
UniProt: | F5H3M4P09769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.31e-71 | 72 |
leukocyte | 7.59e-63 | 136 |
granulocyte monocyte progenitor cell | 4.21e-62 | 67 |
myeloid lineage restricted progenitor cell | 3.65e-59 | 66 |
monopoietic cell | 1.61e-57 | 59 |
monocyte | 1.61e-57 | 59 |
monoblast | 1.61e-57 | 59 |
promonocyte | 1.61e-57 | 59 |
macrophage dendritic cell progenitor | 5.88e-57 | 61 |
defensive cell | 2.00e-56 | 48 |
phagocyte | 2.00e-56 | 48 |
hematopoietic lineage restricted progenitor cell | 1.31e-51 | 120 |
nongranular leukocyte | 5.26e-51 | 115 |
classical monocyte | 4.75e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.75e-50 | 42 |
hematopoietic stem cell | 6.94e-48 | 168 |
hematopoietic oligopotent progenitor cell | 1.07e-44 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-44 | 161 |
myeloid cell | 3.37e-44 | 108 |
common myeloid progenitor | 3.37e-44 | 108 |
hematopoietic cell | 1.16e-43 | 177 |
intermediate monocyte | 1.08e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.08e-11 | 9 |
granulocyte | 2.55e-10 | 8 |
mesenchymal cell | 3.24e-09 | 354 |
connective tissue cell | 1.59e-08 | 361 |
B cell | 8.47e-08 | 14 |
macrophage | 1.36e-07 | 6 |
blood cell | 7.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.78e-60 | 98 |
blood island | 4.78e-60 | 98 |
hemolymphoid system | 6.12e-55 | 108 |
bone marrow | 7.67e-52 | 76 |
bone element | 2.86e-46 | 82 |
immune system | 2.23e-45 | 93 |
skeletal element | 5.05e-40 | 90 |
skeletal system | 9.97e-35 | 100 |
lateral plate mesoderm | 1.94e-23 | 203 |
adult organism | 2.33e-22 | 114 |
musculoskeletal system | 1.36e-15 | 167 |
mesoderm | 1.99e-10 | 315 |
mesoderm-derived structure | 1.99e-10 | 315 |
presumptive mesoderm | 1.99e-10 | 315 |
blood | 9.60e-10 | 15 |
haemolymphatic fluid | 9.60e-10 | 15 |
organism substance | 9.60e-10 | 15 |
tissue | 5.34e-08 | 773 |
connective tissue | 5.43e-08 | 371 |