FFCP PHASE1:Hg19::chr3:188889706..188889735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285386 | |EntrezGene=285386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24759 | |HGNC=24759 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZUI0 | |UniProt=Q6ZUI0 | ||
|association_with_transcript=-27bp_to_ENST00000345063,NM_198485,uc003frw.1_5end | |association_with_transcript=-27bp_to_ENST00000345063,NM_198485,uc003frw.1_5end | ||
|cluster_id=chr3:188889706..188889735,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_TPRG1_5end | |description=CAGE_peak_2_at_TPRG1_5end | ||
|id=chr3:188889706..188889735,+ | |id=chr3:188889706..188889735,+ | ||
|ontology_enrichment_celltype=CL:0002368!6.76e-10!13;CL:0002076!9.72e-10!43;CL:0000898!2.04e-09!3;CL:0001014!5.18e-07!2;CL:0001016!5.18e-07!2;CL:0000815!7.18e-07!2;CL:0000792!7.18e-07!2;CL:0000575!7.18e-07!2;CL:0002677!7.18e-07!2 | |ontology_enrichment_celltype=CL:0002368!6.76e-10!13;CL:0002076!9.72e-10!43;CL:0000898!2.04e-09!3;CL:0001014!5.18e-07!2;CL:0001016!5.18e-07!2;CL:0000815!7.18e-07!2;CL:0000792!7.18e-07!2;CL:0000575!7.18e-07!2;CL:0002677!7.18e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.09e-16;5!CL:0000349;1.10e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.00e-16,5;CL:0000349,1.08e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.98e-10;1!UBERON:0000358;6.06e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;9.40e-10;1!DOID:3149;9.40e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.17e-09,1;DOID:3149,1.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.76e-11!72;UBERON:0001042!4.92e-11!10;UBERON:0009145!4.92e-11!10;UBERON:0000065!1.28e-10!53;UBERON:0000974!2.53e-10!10;UBERON:0006562!5.89e-10!11;UBERON:0000072!2.23e-08!46;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0003408!1.37e-07!10;UBERON:0002370!1.39e-07!4;UBERON:0005058!1.39e-07!4;UBERON:0009113!1.39e-07!4;UBERON:0003295!1.39e-07!4;UBERON:0005562!1.39e-07!4;UBERON:0007196!3.27e-07!14;UBERON:0001558!3.27e-07!14;UBERON:0003127!3.29e-07!2;UBERON:0003126!3.89e-07!7;UBERON:0001005!3.89e-07!7;UBERON:0000341!4.59e-07!2;UBERON:0004177!5.20e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.90e-18;2!UBERON:0005058;2.90e-18;2!UBERON:0009113;2.90e-18;2!UBERON:0005631;1.86e-14;10!UBERON:0000158;1.86e-14;10!UBERON:0001723;8.09e-13;3!UBERON:0001033;8.09e-13;3!UBERON:0000305;4.40e-12;7!UBERON:0002372;2.16e-10;1!UBERON:0001961;2.16e-10;1!UBERON:0001744;2.16e-10;1!UBERON:0001042;2.16e-10;1!UBERON:0001735;2.16e-10;1!UBERON:0005795;2.97e-10;1!UBERON:0007029;6.06e-10;1!UBERON:0000014;1.89e-09;4!UBERON:0000478;4.55e-09;24!UBERON:0004177;7.51e-08;5!UBERON:0005057;7.51e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001042,6.92e-22,10;UBERON:0009145,6.92e-22,10;UBERON:0006562,6.83e-20,11;UBERON:0001723,8.34e-13,3;UBERON:0001033,8.34e-13,3;UBERON:0010056,8.34e-13,3;UBERON:0000305,4.16e-12,7;UBERON:0001557,1.80e-11,19;UBERON:0004871,1.17e-10,8;UBERON:0005631,2.14e-10,14;UBERON:0000158,2.14e-10,14;UBERON:0002372,2.16e-10,1;UBERON:0001961,2.16e-10,1;UBERON:0001744,2.16e-10,1;UBERON:0001735,2.16e-10,1;UBERON:0007029,5.79e-10,1;UBERON:0002370,1.34e-09,4;UBERON:0005058,1.34e-09,4;UBERON:0009113,1.34e-09,4;UBERON:0003295,1.34e-09,4;UBERON:0005562,1.34e-09,4;UBERON:0000014,2.06e-09,4;UBERON:0000478,4.55e-09,24;UBERON:0000974,1.91e-08,10;UBERON:0003408,2.11e-08,10;UBERON:0000072,2.35e-08,47;UBERON:0008814,5.49e-08,18;UBERON:0000065,3.57e-07,54;UBERON:0001041,7.22e-07,87 | |||
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| ||
|short_description=p2@TPRG1 | |short_description=p2@TPRG1 | ||
}} | }} |
Latest revision as of 08:52, 17 September 2015
Short description: | p2@TPRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TPRG1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -27bp_to_ENST00000345063, NM_198485, uc003frw.1_5end |
EntrezGene: | TPRG1 |
HGNC: | 24759 |
UniProt: | Q6ZUI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.00e-16 | 5 |
extraembryonic cell | 1.08e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chordate pharynx | 6.92e-22 | 10 |
pharyngeal region of foregut | 6.92e-22 | 10 |
pharynx | 6.83e-20 | 11 |
tongue | 8.34e-13 | 3 |
gustatory system | 8.34e-13 | 3 |
future tongue | 8.34e-13 | 3 |
amnion | 4.16e-12 | 7 |
upper respiratory tract | 1.80e-11 | 19 |
somatic layer of lateral plate mesoderm | 1.17e-10 | 8 |
extraembryonic membrane | 2.14e-10 | 14 |
membranous layer | 2.14e-10 | 14 |
tonsil | 2.16e-10 | 1 |
mucosa-associated lymphoid tissue | 2.16e-10 | 1 |
lymphoid tissue | 2.16e-10 | 1 |
tonsillar ring | 2.16e-10 | 1 |
surface | 5.79e-10 | 1 |
thymus | 1.34e-09 | 4 |
hemolymphoid system gland | 1.34e-09 | 4 |
thymic region | 1.34e-09 | 4 |
pharyngeal gland | 1.34e-09 | 4 |
thymus primordium | 1.34e-09 | 4 |
zone of skin | 2.06e-09 | 4 |
extraembryonic structure | 4.55e-09 | 24 |
neck | 1.91e-08 | 10 |
gland of gut | 2.11e-08 | 10 |
segment of respiratory tract | 2.35e-08 | 47 |
pharyngeal arch system | 5.49e-08 | 18 |
respiratory tract | 3.57e-07 | 54 |
foregut | 7.22e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.17e-09 | 1 |
keratoacanthoma | 1.17e-09 | 1 |