FFCP PHASE1:Hg19::chr13:45010383..45010399,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8848 | |EntrezGene=8848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |HGNC=16826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=162bp_to_ENST00000496838_5end | |association_with_transcript=162bp_to_ENST00000496838_5end | ||
|cluster_id=chr13:45010383..45010399,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_57_at_TSC22D1_5end | |description=CAGE_peak_57_at_TSC22D1_5end | ||
|id=chr13:45010383..45010399,- | |id=chr13:45010383..45010399,- | ||
|ontology_enrichment_celltype=CL:0002057!1.44e-32!42;CL:0000860!5.60e-30!45;CL:0000839!2.76e-20!70;CL:0000557!6.51e-20!71;CL:0002194!2.98e-19!63;CL:0000576!2.98e-19!63;CL:0000040!2.98e-19!63;CL:0000559!2.98e-19!63;CL:0002009!1.74e-18!65;CL:0000766!3.41e-18!76;CL:0000763!2.06e-11!112;CL:0000049!2.06e-11!112;CL:0000738!9.23e-10!140;CL:0002087!1.80e-09!119;CL:0002031!7.88e-09!124;CL:0000037!1.96e-07!172;CL:0000566!1.96e-07!172 | |ontology_enrichment_celltype=CL:0002057!1.44e-32!42;CL:0000860!5.60e-30!45;CL:0000839!2.76e-20!70;CL:0000557!6.51e-20!71;CL:0002194!2.98e-19!63;CL:0000576!2.98e-19!63;CL:0000040!2.98e-19!63;CL:0000559!2.98e-19!63;CL:0002009!1.74e-18!65;CL:0000766!3.41e-18!76;CL:0000763!2.06e-11!112;CL:0000049!2.06e-11!112;CL:0000738!9.23e-10!140;CL:0002087!1.80e-09!119;CL:0002031!7.88e-09!124;CL:0000037!1.96e-07!172;CL:0000566!1.96e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-47;33!CL:0002057;2.72e-47;33!CL:0000576;1.81e-33;48!CL:0000473;5.54e-33;39!CL:0000234;5.54e-33;39!CL:0000766;3.95e-23;69!CL:0002393;3.86e-19;6!CL:0002397;3.86e-19;6!CL:0002087;1.55e-13;104!CL:0000763;1.39e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-64,42;CL:0002057,1.03e-64,42;CL:0000473,1.90e-56,48;CL:0000234,1.90e-56,48;CL:0002194,7.21e-45,59;CL:0000576,7.21e-45,59;CL:0000040,7.21e-45,59;CL:0000559,7.21e-45,59;CL:0002009,2.26e-43,61;CL:0000839,5.03e-40,66;CL:0000557,2.05e-39,67;CL:0000766,1.31e-36,72;CL:0000763,5.37e-24,108;CL:0000049,5.37e-24,108;CL:0002087,1.89e-22,115;CL:0002031,1.88e-21,120;CL:0000738,9.44e-19,136;CL:0002032,1.36e-15,161;CL:0000837,1.36e-15,161;CL:0000037,7.13e-15,168;CL:0000988,4.95e-14,177;CL:0002393,4.99e-13,9;CL:0002397,4.99e-13,9;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.78e-45;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.64e-17!80;UBERON:0001474!2.32e-15!86;UBERON:0002390!1.62e-14!102;UBERON:0003061!1.62e-14!102;UBERON:0002193!1.24e-12!112;UBERON:0004765!3.54e-12!101;UBERON:0001434!3.54e-12!101;UBERON:0002405!3.77e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-34,76;UBERON:0001474,5.16e-32,82;UBERON:0004765,4.63e-29,90;UBERON:0002405,4.40e-28,93;UBERON:0002390,1.39e-26,98;UBERON:0003061,1.39e-26,98;UBERON:0001434,5.02e-26,100;UBERON:0002193,5.37e-24,108;UBERON:0002204,5.68e-15,167;UBERON:0003081,5.16e-12,203;UBERON:0000926,4.47e-07,315;UBERON:0004120,4.47e-07,315;UBERON:0006603,4.47e-07,315;UBERON:0002384,9.92e-07,371 | |||
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| ||
|short_description=p57@TSC22D1 | |short_description=p57@TSC22D1 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p57@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_57_at_TSC22D1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 162bp_to_ENST00000496838_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.03e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-64 | 42 |
defensive cell | 1.90e-56 | 48 |
phagocyte | 1.90e-56 | 48 |
monopoietic cell | 7.21e-45 | 59 |
monocyte | 7.21e-45 | 59 |
monoblast | 7.21e-45 | 59 |
promonocyte | 7.21e-45 | 59 |
macrophage dendritic cell progenitor | 2.26e-43 | 61 |
myeloid lineage restricted progenitor cell | 5.03e-40 | 66 |
granulocyte monocyte progenitor cell | 2.05e-39 | 67 |
myeloid leukocyte | 1.31e-36 | 72 |
myeloid cell | 5.37e-24 | 108 |
common myeloid progenitor | 5.37e-24 | 108 |
nongranular leukocyte | 1.89e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.88e-21 | 120 |
leukocyte | 9.44e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.36e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-15 | 161 |
hematopoietic stem cell | 7.13e-15 | 168 |
hematopoietic cell | 4.95e-14 | 177 |
intermediate monocyte | 4.99e-13 | 9 |
CD14-positive, CD16-positive monocyte | 4.99e-13 | 9 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.25e-34 | 76 |
bone element | 5.16e-32 | 82 |
skeletal element | 4.63e-29 | 90 |
immune system | 4.40e-28 | 93 |
hematopoietic system | 1.39e-26 | 98 |
blood island | 1.39e-26 | 98 |
skeletal system | 5.02e-26 | 100 |
hemolymphoid system | 5.37e-24 | 108 |
musculoskeletal system | 5.68e-15 | 167 |
lateral plate mesoderm | 5.16e-12 | 203 |
mesoderm | 4.47e-07 | 315 |
mesoderm-derived structure | 4.47e-07 | 315 |
presumptive mesoderm | 4.47e-07 | 315 |
connective tissue | 9.92e-07 | 371 |