FFCP PHASE1:Hg19::chr4:2813986..2814010,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:2813986..2814010,+
|short_description=p7@SH3BP2
|description=CAGE_peak_7_at_SH3BP2_5end
|association_with_transcript=-6bp_to_ENST00000502260_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6452 | |EntrezGene=6452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10825 | |HGNC=10825 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAB4 | |UniProt=D6RAB4 | ||
|association_with_transcript=-6bp_to_ENST00000502260_5end | |||
|cluster_id=chr4:2813986..2814010,+ | |||
|description=CAGE_peak_7_at_SH3BP2_5end | |||
|id=chr4:2813986..2814010,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.17e-19!182;CL:0000037!7.61e-16!172;CL:0000566!7.61e-16!172;CL:0002032!6.53e-15!165;CL:0000837!6.53e-15!165;CL:0002320!1.23e-14!365;CL:0000134!3.93e-14!358;CL:0000219!7.79e-13!390;CL:0000115!2.17e-11!35;CL:0002087!7.12e-11!119;CL:0002031!2.06e-10!124;CL:0000738!3.96e-10!140;CL:0000838!1.13e-09!52;CL:0000048!1.64e-09!430;CL:0000542!1.99e-09!53;CL:0000051!1.99e-09!53;CL:0002371!3.03e-09!591;CL:0002078!3.68e-09!44;CL:0002139!4.35e-09!24;CL:0000723!3.11e-08!436;CL:0000084!5.44e-08!25;CL:0000827!5.44e-08!25;CL:0000034!1.09e-07!444;CL:0000071!1.28e-07!18;CL:0002546!1.28e-07!18;CL:0000144!4.25e-07!625;CL:0000763!6.79e-07!112;CL:0000049!6.79e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.97e-11;36!CL:0002139;3.98e-10;24!CL:0000071;1.39e-08;18!CL:0000084;3.16e-08;25!CL:1000449;1.09e-07;15!CL:0002078;6.60e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.71e-19,177;CL:0000037,9.65e-17,168;CL:0002032,6.24e-16,161;CL:0000837,6.24e-16,161;CL:0002320,3.99e-13,361;CL:0000134,6.36e-13,354;CL:0000115,8.43e-13,36;CL:0000219,2.13e-11,386;CL:0002087,5.70e-11,115;CL:0002031,1.98e-10,120;CL:0002078,3.12e-10,45;CL:0002139,4.66e-10,24;CL:0000738,5.43e-10,136;CL:0000838,2.02e-09,52;CL:0000542,6.26e-09,53;CL:0000051,6.26e-09,53;CL:0000048,1.50e-08,427;CL:0000071,1.86e-08,18;CL:0002546,1.86e-08,18;CL:0000084,3.26e-08,25;CL:0000827,3.26e-08,25;CL:0000763,5.61e-08,108;CL:0000049,5.61e-08,108;CL:1000449,1.23e-07,15;CL:0000723,1.32e-07,433;CL:0000034,5.21e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002546;1.39e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!8.62e-12!51;DOID:0060083!8.62e-12!51;DOID:1240!1.78e-10!39;DOID:8692!7.95e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.06e-09;31!DOID:1240;1.81e-08;39!DOID:2531;3.28e-08;51!DOID:0060083;3.28e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.24e-13,51;DOID:0060083,4.24e-13,51;DOID:1240,1.79e-11,39;DOID:8692,2.28e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.35e-14!375;UBERON:0002193!3.47e-10!112;UBERON:0002390!5.68e-08!102;UBERON:0003061!5.68e-08!102;UBERON:0003887!8.23e-08!21;UBERON:0001986!1.28e-07!18;UBERON:0004638!1.28e-07!18;UBERON:0004852!1.28e-07!18;UBERON:0003081!4.30e-07!216;UBERON:0000487!5.87e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.39e-08;18!UBERON:0001986;1.39e-08;18!UBERON:0004852;1.39e-08;18!UBERON:0006555;1.09e-07;15!UBERON:0004819;1.09e-07;15!UBERON:0001285;1.09e-07;15!UBERON:0007684;1.09e-07;15!UBERON:0000487;1.26e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.67e-12,371;UBERON:0002193,5.41e-11,108;UBERON:0002390,1.51e-08,98;UBERON:0003061,1.51e-08,98;UBERON:0004638,1.86e-08,18;UBERON:0001986,1.86e-08,18;UBERON:0004852,1.86e-08,18;UBERON:0002405,1.08e-07,93;UBERON:0004211,1.23e-07,15;UBERON:0009773,1.23e-07,15;UBERON:0001231,1.23e-07,15;UBERON:0001285,1.23e-07,15;UBERON:0007684,1.23e-07,15;UBERON:0004208,1.23e-07,15;UBERON:0000487,1.95e-07,22;UBERON:0006555,2.05e-07,16;UBERON:0004819,2.05e-07,16 | |||
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| ||
|short_description=p7@SH3BP2 | |||
}} | }} |
Latest revision as of 12:26, 17 September 2015
Short description: | p7@SH3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SH3BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000502260_5end |
EntrezGene: | SH3BP2 |
HGNC: | 10825 |
UniProt: | D6RAB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.71e-19 | 177 |
hematopoietic stem cell | 9.65e-17 | 168 |
hematopoietic oligopotent progenitor cell | 6.24e-16 | 161 |
hematopoietic multipotent progenitor cell | 6.24e-16 | 161 |
connective tissue cell | 3.99e-13 | 361 |
mesenchymal cell | 6.36e-13 | 354 |
endothelial cell | 8.43e-13 | 36 |
motile cell | 2.13e-11 | 386 |
nongranular leukocyte | 5.70e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-10 | 120 |
meso-epithelial cell | 3.12e-10 | 45 |
endothelial cell of vascular tree | 4.66e-10 | 24 |
leukocyte | 5.43e-10 | 136 |
lymphoid lineage restricted progenitor cell | 2.02e-09 | 52 |
lymphocyte | 6.26e-09 | 53 |
common lymphoid progenitor | 6.26e-09 | 53 |
multi fate stem cell | 1.50e-08 | 427 |
blood vessel endothelial cell | 1.86e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.86e-08 | 18 |
T cell | 3.26e-08 | 25 |
pro-T cell | 3.26e-08 | 25 |
myeloid cell | 5.61e-08 | 108 |
common myeloid progenitor | 5.61e-08 | 108 |
epithelial cell of nephron | 1.23e-07 | 15 |
somatic stem cell | 1.32e-07 | 433 |
stem cell | 5.21e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.67e-12 | 371 |
hemolymphoid system | 5.41e-11 | 108 |
hematopoietic system | 1.51e-08 | 98 |
blood island | 1.51e-08 | 98 |
blood vessel endothelium | 1.86e-08 | 18 |
endothelium | 1.86e-08 | 18 |
cardiovascular system endothelium | 1.86e-08 | 18 |
immune system | 1.08e-07 | 93 |
nephron epithelium | 1.23e-07 | 15 |
renal tubule | 1.23e-07 | 15 |
nephron tubule | 1.23e-07 | 15 |
nephron | 1.23e-07 | 15 |
uriniferous tubule | 1.23e-07 | 15 |
nephrogenic mesenchyme | 1.23e-07 | 15 |
simple squamous epithelium | 1.95e-07 | 22 |
excretory tube | 2.05e-07 | 16 |
kidney epithelium | 2.05e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.24e-13 | 51 |
immune system cancer | 4.24e-13 | 51 |
leukemia | 1.79e-11 | 39 |
myeloid leukemia | 2.28e-10 | 31 |