FFCP PHASE1:Hg19::chr10:21186217..21186247,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10529 | |EntrezGene=10529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16932 | |HGNC=16932 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JUU8 | |UniProt=Q5JUU8 | ||
|association_with_transcript=-73bp_to_ENST00000377119_5end | |association_with_transcript=-73bp_to_ENST00000377119_5end | ||
|cluster_id=chr10:21186217..21186247,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_NEBL_5end | |description=CAGE_peak_2_at_NEBL_5end | ||
|id=chr10:21186217..21186247,- | |id=chr10:21186217..21186247,- | ||
|ontology_enrichment_celltype=CL:0002548!2.44e-08!6;CL:0002097!5.24e-07!2 | |ontology_enrichment_celltype=CL:0002548!2.44e-08!6;CL:0002097!5.24e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000746;5.03e-11;3!CL:0000737;1.73e-08;4!CL:0002494;7.78e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,4.90e-11,3;CL:0000513,4.90e-11,3;CL:0000737,1.70e-08,4;CL:0002494,7.78e-08,16 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.36e-18;4!UBERON:0007284;1.36e-18;4!CL:0000513;5.03e-11;3!UBERON:0010227;1.60e-09;1!UBERON:0010226;1.74e-09;1!UBERON:0004140;2.22e-09;1!UBERON:0000358;3.31e-09;1 | |||
|ontology_enrichment_disease=DOID:114!1.37e-07!2 | |ontology_enrichment_disease=DOID:114!1.37e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;6.23e-17;2!DOID:178;3.05e-09;1!DOID:326;3.05e-09;1!DOID:3978;3.05e-09;1!DOID:3394;3.05e-09;1!DOID:5844;3.05e-09;1!DOID:1287;6.48e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.23e-17,2;DOID:178,3.05e-09,1;DOID:326,3.05e-09,1;DOID:3978,3.05e-09,1;DOID:3394,3.05e-09,1;DOID:5844,3.05e-09,1;DOID:1287,6.48e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.05e-26!27;UBERON:0000948!2.85e-19!24;UBERON:0005498!2.85e-19!24;UBERON:0004140!2.85e-19!24;UBERON:0009881!2.85e-19!24;UBERON:0004141!2.85e-19!24;UBERON:0003084!2.85e-19!24;UBERON:0007005!2.85e-19!24;UBERON:0004139!2.85e-19!24;UBERON:0004291!2.85e-19!24;UBERON:0003103!1.88e-11!69;UBERON:0004151!1.14e-10!3;UBERON:0003978!1.37e-10!3;UBERON:0009751!1.37e-10!3;UBERON:0000946!1.37e-10!3;UBERON:0002523!1.37e-10!3;UBERON:0005983!1.37e-10!3;UBERON:0002165!1.37e-10!3;UBERON:0002062!1.37e-10!3;UBERON:0007280!1.37e-10!3;UBERON:0007023!4.36e-10!115;UBERON:0002342!1.08e-09!14;UBERON:0005062!1.08e-09!14;UBERON:0000025!1.86e-08!194;UBERON:0004872!2.94e-08!84;UBERON:0002081!1.21e-07!2;UBERON:0002133!1.41e-07!2;UBERON:0003914!9.99e-07!118 | |ontology_enrichment_uberon=UBERON:0007100!3.05e-26!27;UBERON:0000948!2.85e-19!24;UBERON:0005498!2.85e-19!24;UBERON:0004140!2.85e-19!24;UBERON:0009881!2.85e-19!24;UBERON:0004141!2.85e-19!24;UBERON:0003084!2.85e-19!24;UBERON:0007005!2.85e-19!24;UBERON:0004139!2.85e-19!24;UBERON:0004291!2.85e-19!24;UBERON:0003103!1.88e-11!69;UBERON:0004151!1.14e-10!3;UBERON:0003978!1.37e-10!3;UBERON:0009751!1.37e-10!3;UBERON:0000946!1.37e-10!3;UBERON:0002523!1.37e-10!3;UBERON:0005983!1.37e-10!3;UBERON:0002165!1.37e-10!3;UBERON:0002062!1.37e-10!3;UBERON:0007280!1.37e-10!3;UBERON:0007023!4.36e-10!115;UBERON:0002342!1.08e-09!14;UBERON:0005062!1.08e-09!14;UBERON:0000025!1.86e-08!194;UBERON:0004872!2.94e-08!84;UBERON:0002081!1.21e-07!2;UBERON:0002133!1.41e-07!2;UBERON:0003914!9.99e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.41e-51;25!UBERON:0000948;4.79e-34;22!UBERON:0004151;8.73e-25;3!UBERON:0003978;1.40e-24;3!UBERON:0000946;1.40e-24;3!UBERON:0002081;4.54e-17;2!UBERON:0002133;6.75e-17;2!UBERON:0003103;1.05e-12;61!UBERON:0002079;1.60e-09;1!UBERON:0002084;1.74e-09;1!UBERON:0002082;1.74e-09;1!UBERON:0002146;1.89e-09;1!UBERON:0005623;1.89e-09;1!UBERON:0002135;2.40e-09;1!UBERON:0002134;2.82e-09;1!UBERON:0005208;2.82e-09;1!UBERON:0004145;2.82e-09;1!UBERON:0005946;2.82e-09;1!UBERON:0005965;2.82e-09;1!UBERON:0002078;2.82e-09;1!UBERON:0007029;3.88e-09;1!UBERON:0010313;9.74e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.93e-47,27;UBERON:0000948,4.44e-31,24;UBERON:0005498,4.44e-31,24;UBERON:0004140,4.44e-31,24;UBERON:0009881,4.44e-31,24;UBERON:0004141,4.44e-31,24;UBERON:0003084,4.44e-31,24;UBERON:0007005,4.44e-31,24;UBERON:0004139,4.44e-31,24;UBERON:0004291,4.44e-31,24;UBERON:0004151,8.73e-25,3;UBERON:0003978,1.40e-24,3;UBERON:0009751,1.40e-24,3;UBERON:0000946,1.40e-24,3;UBERON:0002523,1.40e-24,3;UBERON:0005983,1.40e-24,3;UBERON:0002165,1.40e-24,3;UBERON:0002062,1.40e-24,3;UBERON:0007280,1.40e-24,3;UBERON:0003103,3.84e-23,68;UBERON:0002081,4.54e-17,2;UBERON:0010227,4.54e-17,2;UBERON:0002133,6.75e-17,2;UBERON:0001009,3.89e-11,112;UBERON:0004797,7.42e-11,7;UBERON:0002079,1.60e-09,1;UBERON:0004872,1.65e-09,83;UBERON:0002084,1.74e-09,1;UBERON:0002082,1.74e-09,1;UBERON:0010226,1.74e-09,1;UBERON:0002146,1.89e-09,1;UBERON:0005623,1.89e-09,1;UBERON:0002135,2.40e-09,1;UBERON:0002134,2.82e-09,1;UBERON:0005208,2.82e-09,1;UBERON:0005946,2.82e-09,1;UBERON:0005965,2.82e-09,1;UBERON:0002078,2.82e-09,1;UBERON:0007029,3.88e-09,1;UBERON:0010313,9.74e-08,10;UBERON:0002342,9.74e-08,10;UBERON:0005062,9.74e-08,10;UBERON:0004535,8.47e-07,109 | |||
|phase1_expression=0.181678379270557,0,1.12763523276777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,0,1.91793842765295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,20.1843936051231,0,0.74000264525148,7.78027588499416,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,2.71295439353627,5.22920075160176,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.47298427954533,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0,0,0,0,0,3.48332062874083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,423.950685131282,695.50188687546,207.465304102699,190.09440847504,673.45566952628,284.320436780946,454.76492526265,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,1368.641550005,1359.27481516023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,2.20086027139532,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0.385239660814607,3.21662387062389,0,0,0,0,0,0,7.89422578483346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9427287293064,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,3.8039015482506,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0.606351566874658,0,0,0,0,8.98182962674236,0,0,0,0,100.895605233485,0,0,0,2.61655931668334,0 | |phase1_expression=0.181678379270557,0,1.12763523276777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,0,1.91793842765295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,20.1843936051231,0,0.74000264525148,7.78027588499416,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,2.71295439353627,5.22920075160176,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.47298427954533,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0,0,0,0,0,3.48332062874083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,423.950685131282,695.50188687546,207.465304102699,190.09440847504,673.45566952628,284.320436780946,454.76492526265,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,1368.641550005,1359.27481516023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,2.20086027139532,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0.385239660814607,3.21662387062389,0,0,0,0,0,0,7.89422578483346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9427287293064,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,3.8039015482506,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0.606351566874658,0,0,0,0,8.98182962674236,0,0,0,0,100.895605233485,0,0,0,2.61655931668334,0 | ||
|short_description=p2@NEBL | |short_description=p2@NEBL | ||
}} | }} |
Latest revision as of 13:37, 17 September 2015
Short description: | p2@NEBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEBL_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -73bp_to_ENST00000377119_5end |
EntrezGene: | NEBL |
HGNC: | 16932 |
UniProt: | Q5JUU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 4.90e-11 | 3 |
cardiac muscle myoblast | 4.90e-11 | 3 |
striated muscle cell | 1.70e-08 | 4 |
cardiocyte | 7.78e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.23e-17 | 2 |
vascular disease | 3.05e-09 | 1 |
ischemia | 3.05e-09 | 1 |
extrinsic cardiomyopathy | 3.05e-09 | 1 |
myocardial ischemia | 3.05e-09 | 1 |
myocardial infarction | 3.05e-09 | 1 |
cardiovascular system disease | 6.48e-09 | 4 |