FFCP PHASE1:Hg19::chr9:5510613..5510622,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:5510613..5510622,+ to FFCP PHASE1:Hg19::chr9:5510613..5510622,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80380 | |EntrezGene=80380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18731 | |HGNC=18731 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ51 | |UniProt=Q9BQ51 | ||
|association_with_transcript=43bp_to_ENST00000397747_5end | |||
|cluster_id=chr9:5510613..5510622,+ | |||
|coexpression_cluster_id=C2021 | |||
|description=CAGE_peak_4_at_PDCD1LG2_5end | |||
|id=chr9:5510613..5510622,+ | |||
|ontology_enrichment_celltype=CL:0000359!6.10e-17!32;CL:0000055!3.22e-16!180;CL:0000144!3.99e-16!625;CL:0000192!9.15e-15!42;CL:0000514!9.15e-15!42;CL:0002371!1.93e-14!591;CL:0000548!2.14e-14!679;CL:0000004!2.14e-14!679;CL:0000255!2.14e-14!679;CL:0000012!6.36e-14!682;CL:0000680!1.12e-11!57;CL:0000056!1.12e-11!57;CL:0000355!1.12e-11!57;CL:0000222!3.99e-11!119;CL:0000723!7.80e-11!436;CL:0000187!1.60e-10!54;CL:0000048!1.77e-10!430;CL:0002620!2.63e-10!23;CL:0000003!3.15e-10!722;CL:0000034!1.04e-09!444;CL:0000393!1.54e-09!60;CL:0000211!1.54e-09!60;CL:0000183!1.55e-09!59;CL:0000057!1.09e-08!75;CL:0002539!2.24e-08!10;CL:0000220!1.79e-07!246;CL:0002321!3.44e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.76e-19;32!CL:0002539;5.05e-10;10!CL:0000192;7.35e-10;43!CL:0002166;2.45e-07;3!CL:0002595;2.58e-07;5!CL:0002541;6.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.07e-21,32;CL:0000192,2.13e-14,43;CL:0000514,2.13e-14,43;CL:0000680,2.68e-10,58;CL:0000056,2.68e-10,58;CL:0000355,2.68e-10,58;CL:0002539,3.62e-10,10;CL:0000187,4.97e-10,55;CL:0000393,1.67e-09,61;CL:0000211,1.67e-09,61;CL:0002595,1.76e-07,5;CL:0002166,2.28e-07,3;CL:0000723,2.73e-07,433;CL:0000048,3.39e-07,427;CL:0002541,3.67e-07,3;CL:0000034,7.53e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;7.35e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.96e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.03e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.33e-16!42;UBERON:0003509!4.33e-16!42;UBERON:0004572!4.33e-16!42;UBERON:0004872!4.96e-13!84;UBERON:0000914!5.84e-13!83;UBERON:0002329!5.84e-13!83;UBERON:0003077!5.84e-13!83;UBERON:0003059!5.84e-13!83;UBERON:0007282!5.84e-13!83;UBERON:0009618!5.84e-13!83;UBERON:0007285!5.84e-13!83;UBERON:0004573!9.24e-13!33;UBERON:0004571!9.24e-13!33;UBERON:0000486!1.33e-11!82;UBERON:0001981!1.99e-11!60;UBERON:0007500!1.99e-11!60;UBERON:0004537!1.99e-11!60;UBERON:0006965!1.99e-11!60;UBERON:0000055!1.52e-10!69;UBERON:0001134!6.02e-10!61;UBERON:0002036!6.02e-10!61;UBERON:0003082!6.02e-10!61;UBERON:0004290!6.20e-10!70;UBERON:0002204!3.18e-09!167;UBERON:0002385!3.49e-09!63;UBERON:0001015!3.49e-09!63;UBERON:0000383!3.49e-09!63;UBERON:0002049!4.11e-09!79;UBERON:0007798!4.11e-09!79;UBERON:0004237!2.24e-08!10;UBERON:0004695!2.24e-08!10;UBERON:0002111!2.24e-08!10;UBERON:0004178!2.24e-08!10;UBERON:0000947!5.16e-08!21;UBERON:0010191!5.16e-08!21;UBERON:0003081!1.60e-07!216;UBERON:0004535!1.61e-07!110;UBERON:0003102!3.04e-07!95;UBERON:0005256!4.70e-07!143;UBERON:0002199!5.37e-07!45;UBERON:0002416!5.37e-07!45;UBERON:0001009!7.11e-07!113;UBERON:0002097!8.73e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.08e-10;33!UBERON:0004571;2.08e-10;33!UBERON:0004237;5.05e-10;10!UBERON:0004695;5.05e-10;10!UBERON:0002111;5.05e-10;10!UBERON:0004178;5.05e-10;10!UBERON:0001708;8.99e-09;4!UBERON:0008895;8.99e-09;4!UBERON:0001637;1.05e-08;42!UBERON:0003509;1.05e-08;42!UBERON:0004572;1.05e-08;42!UBERON:0003834;2.58e-07;5!UBERON:0001533;2.58e-07;5!UBERON:0002118;4.51e-07;5!UBERON:0011159;5.49e-07;5!UBERON:0003124;6.80e-07;3!UBERON:0000920;6.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.83e-13,42;UBERON:0003509,2.83e-13,42;UBERON:0004572,2.83e-13,42;UBERON:0004573,5.48e-11,33;UBERON:0004571,5.48e-11,33;UBERON:0004237,3.62e-10,10;UBERON:0004695,3.62e-10,10;UBERON:0002111,3.62e-10,10;UBERON:0004178,3.62e-10,10;UBERON:0002204,7.74e-10,167;UBERON:0001134,2.86e-09,62;UBERON:0002036,2.86e-09,62;UBERON:0003082,2.86e-09,62;UBERON:0007500,5.49e-09,59;UBERON:0001981,5.49e-09,59;UBERON:0004537,5.49e-09,59;UBERON:0006965,5.49e-09,59;UBERON:0002385,8.30e-09,64;UBERON:0001015,8.30e-09,64;UBERON:0000383,8.30e-09,64;UBERON:0001708,1.36e-08,4;UBERON:0008895,1.36e-08,4;UBERON:0010188,1.50e-08,6;UBERON:0002539,1.50e-08,6;UBERON:0008816,1.50e-08,6;UBERON:0007524,7.89e-08,73;UBERON:0003834,1.76e-07,5;UBERON:0001533,1.76e-07,5;UBERON:0002329,2.07e-07,71;UBERON:0003059,2.07e-07,71;UBERON:0007282,2.07e-07,71;UBERON:0004290,2.07e-07,71;UBERON:0009618,2.07e-07,71;UBERON:0003077,3.10e-07,72;UBERON:0007285,3.10e-07,72;UBERON:0003081,3.35e-07,203;UBERON:0000920,3.67e-07,3;UBERON:0000055,4.03e-07,68;UBERON:0002118,4.19e-07,5;UBERON:0004872,5.40e-07,83;UBERON:0000486,5.55e-07,83;UBERON:0011159,7.59e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,0,0,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0,0.436882744260345,0,0.123766352960047,0,6.05092631806598,5.42425075221579,3.65155045193687,3.90346239032406,0,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0.916960868975415,0.57470412614962,0.314843125254717,0,0,0,0,0.6024118375565,0.369754010166788,0,0.142169232487422,0,0,0,0,0.447830948479849,0.971680998056939,1.03030227053675,0,0,0,0.697287110717054,0,0,3.16461631554365,2.81776777182011,2.36482229888585,0,0,0,0.188242339542605,0,0,0.612167784741805,0.641858054152187,1.27867425159808,2.30895910130701,1.39624560335142,2.13112375266347,0,0,0,2.76373531782418,3.65038042894141,1.3031330682307,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,3.8945687238562,5.74628133087582,6.1160661838678,0,0,0,0.596287222100115,0.860234595106124,0,0,0.838998872419812,0.550236083880135,0,0,0.35576626268671,0.66944122552934,0,0,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0.622422070799533,0.538842688278752,0.326923806226917,0,0,0,0.624320153660641,0.570471821544449,0.896692083310806,0.469737994575059,0.323745888736263,0,0.204154171254893,0.122834317311768,0,0,0,0.910161361938026,0,0.336672227908132,0.125118519871964,0.831192346452549,0.877955241761676,0.919463387397059,0.300476117813194,0.680593098960126,3.04962380671065,0.213557388818567,0.211931901159562,2.10063767259082,1.54578793857658,0.515281080091258,0.558350568994769,2.02531598689519,1.07180705677318,1.00973509697646,0.368199594569197,0.80823028409406,2.84007674013291,2.01504196455281,1.3564847384839,0.966304265816484,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,1.20634766893957,0.555530670951178,0,0,0,0,0.352226082707465,0.288732895522148,0,0,0,0,0.984868024349589,0.468008530278475,1.33768046059855,2.81201501960331,3.19166043577833,3.40260233381728,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.2933531432838,1.42198887333556,0,0,1.06375246633948,3.12022310734098,0,0,0,0.428933980974443,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,1.2162378064119,0.502257091432126,0,1.19812427745791,0,0,1.30303176000821,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,1.60586089917446,1.57702415033935,1.52283839490527,0.300946099727719,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0,0,0,0,0,0.303127571446259,0,0,0,0.306923946576125,0.280660094433074,0,0.511707249066704,1.28683136914886,0,0.771048469013278,0.177561725313127,0.492762936082855,0.519254429183621,1.16210378459959,0,1.20303882181971,0,0.114814448164607,1.0925470080403,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0.275673144969061,0,0,0,0.0890320356467374,0.330569830721956,1.15314040419064,2.04180339991335,0.30347334256665,0.929691098594572,4.7221852024596,0.6970372701606,1.54016790088044,0.532306030317022,2.60979897622522,2.22389062924704,1.28812398067792,0,0.949138274156178,0.953150969619124,0.255897791311334,0.42793898803392,0,0.78494864019923,0.359744915166629,0,0.117812402345686,2.02182481573316,0,1.68503382495592,0,7.06769119930725,3.16950440270266,0.682499557039929,0.282810863907425,2.26016233240486,0.551365343546124,1.99031692572366,5.26141062304515,0,0,2.84074527747786,1.54911749049875,0.281695602532241,0.573645408816206,1.76848273823618,1.78335525740625,0.354761064070598,0.211107635297664,0.658589785919804,0.379473173765715,0,0.288666338176536,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0.19924798825107,0,0,0,1.10776324914963,5.90975216557434,0.449341755736634,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0.179515288819544,0,2.55200927785536,1.83195186803725,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.417687798021821,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,1.04471047896483,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0,1.36269994427607,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,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| ||
|short_description=p4@PDCD1LG2 | |||
}} | }} |
Latest revision as of 13:52, 17 September 2015
Short description: | p4@PDCD1LG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDCD1LG2_5end |
Coexpression cluster: | C2021_basal_mesenchymal_Dendritic_Smooth_Fibroblast_Aortic_Mallassezderived |
Association with transcript: | 43bp_to_ENST00000397747_5end |
EntrezGene: | PDCD1LG2 |
HGNC: | 18731 |
UniProt: | Q9BQ51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.07e-21 | 32 |
smooth muscle cell | 2.13e-14 | 43 |
smooth muscle myoblast | 2.13e-14 | 43 |
muscle precursor cell | 2.68e-10 | 58 |
myoblast | 2.68e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.68e-10 | 58 |
aortic smooth muscle cell | 3.62e-10 | 10 |
muscle cell | 4.97e-10 | 55 |
electrically responsive cell | 1.67e-09 | 61 |
electrically active cell | 1.67e-09 | 61 |
smooth muscle cell of the subclavian artery | 1.76e-07 | 5 |
epithelial cell of Malassez | 2.28e-07 | 3 |
somatic stem cell | 2.73e-07 | 433 |
multi fate stem cell | 3.39e-07 | 427 |
chorionic membrane mesenchymal stem cell | 3.67e-07 | 3 |
stem cell | 7.53e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.03e-08 | 14 |