FFCP PHASE1:Hg19::chr11:31014065..31014073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506627 | |EntrezGene=100506627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24799 | |HGNC=24799 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_ENST00000483396_5end | |association_with_transcript=157bp_to_ENST00000483396_5end | ||
|cluster_id=chr11:31014065..31014073,- | |||
|coexpression_cluster_id=C445 | |coexpression_cluster_id=C445 | ||
|description=CAGE_peak_1_at_DCDC5_5end | |description=CAGE_peak_1_at_DCDC5_5end | ||
|id=chr11:31014065..31014073,- | |id=chr11:31014065..31014073,- | ||
|ontology_enrichment_celltype=CL:0000064!3.75e-19!3;CL:0005012!3.75e-19!3;CL:0000067!3.75e-19!3;CL:0002304!3.75e-19!3;CL:0000181!1.74e-12!12;CL:0000417!1.74e-12!12;CL:0000668!1.74e-12!12;CL:0000414!1.74e-12!12;CL:0000412!1.74e-12!12;CL:0000182!1.74e-12!12;CL:0002127!7.03e-08!1;CL:0000914!7.03e-08!1;CL:0000911!7.03e-08!1;CL:0000814!7.03e-08!1;CL:0002042!7.03e-08!1;CL:0002039!7.03e-08!1;CL:0002040!7.03e-08!1;CL:0002041!7.03e-08!1;CL:0002553!9.71e-08!1;CL:0000342!1.10e-07!1;CL:0002565!1.10e-07!1;CL:0000319!2.50e-07!1;CL:0000306!8.95e-07!4;CL:0002222!8.95e-07!4;CL:0002224!8.95e-07!4 | |ontology_enrichment_celltype=CL:0000064!3.75e-19!3;CL:0005012!3.75e-19!3;CL:0000067!3.75e-19!3;CL:0002304!3.75e-19!3;CL:0000181!1.74e-12!12;CL:0000417!1.74e-12!12;CL:0000668!1.74e-12!12;CL:0000414!1.74e-12!12;CL:0000412!1.74e-12!12;CL:0000182!1.74e-12!12;CL:0002127!7.03e-08!1;CL:0000914!7.03e-08!1;CL:0000911!7.03e-08!1;CL:0000814!7.03e-08!1;CL:0002042!7.03e-08!1;CL:0002039!7.03e-08!1;CL:0002040!7.03e-08!1;CL:0002041!7.03e-08!1;CL:0002553!9.71e-08!1;CL:0000342!1.10e-07!1;CL:0002565!1.10e-07!1;CL:0000319!2.50e-07!1;CL:0000306!8.95e-07!4;CL:0002222!8.95e-07!4;CL:0002224!8.95e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.88e-21;1!CL:0000911;1.88e-21;1!CL:0000814;1.88e-21;1!CL:0000342;5.71e-21;1!CL:0002553;5.71e-21;1!CL:0002565;5.71e-21;1!CL:0000082;4.58e-10;19!CL:0000182;1.44e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.88e-21,1;CL:0000914,1.88e-21,1;CL:0000911,1.88e-21,1;CL:0000814,1.88e-21,1;CL:0002042,1.88e-21,1;CL:0002039,1.88e-21,1;CL:0002040,1.88e-21,1;CL:0002041,1.88e-21,1;CL:0002553,5.16e-21,1;CL:0000342,7.72e-21,1;CL:0002565,7.72e-21,1;CL:0000893,2.02e-11,2;CL:0002489,2.02e-11,2;CL:0000809,2.02e-11,2;CL:0000808,2.02e-11,2;CL:0000894,2.02e-11,2;CL:0000806,2.02e-11,2;CL:0000807,2.02e-11,2;CL:0000805,2.02e-11,2;CL:0002425,2.02e-11,2;CL:0000082,4.17e-10,19;CL:0000182,1.57e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002425;2.02e-11;2!UBERON:0008947;8.59e-07;29 | |||
|ontology_enrichment_disease=DOID:3030!2.50e-07!1 | |ontology_enrichment_disease=DOID:3030!2.50e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1324;1.40e-12;15!DOID:0050615;7.81e-12;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.25e-12,15;DOID:0050615,6.99e-12,16 | |||
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|short_description=p1@DCDC5 | |short_description=p1@DCDC5 | ||
}} | }} |
Latest revision as of 14:17, 17 September 2015
Short description: | p1@DCDC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCDC5_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 157bp_to_ENST00000483396_5end |
EntrezGene: | DCDC5 |
HGNC: | 24799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.88e-21 | 1 |
immature NK T cell | 1.88e-21 | 1 |
effector T cell | 1.88e-21 | 1 |
mature NK T cell | 1.88e-21 | 1 |
immature NK T cell stage IV | 1.88e-21 | 1 |
immature NK T cell stage I | 1.88e-21 | 1 |
immature NK T cell stage II | 1.88e-21 | 1 |
immature NK T cell stage III | 1.88e-21 | 1 |
lung fibroblast | 5.16e-21 | 1 |
pigment cell (sensu Vertebrata) | 7.72e-21 | 1 |
iris pigment epithelial cell | 7.72e-21 | 1 |
thymocyte | 2.02e-11 | 2 |
double negative thymocyte | 2.02e-11 | 2 |
double-positive, alpha-beta thymocyte | 2.02e-11 | 2 |
DN4 thymocyte | 2.02e-11 | 2 |
DN1 thymic pro-T cell | 2.02e-11 | 2 |
DN2 thymocyte | 2.02e-11 | 2 |
DN3 thymocyte | 2.02e-11 | 2 |
immature single positive thymocyte | 2.02e-11 | 2 |
early T lineage precursor | 2.02e-11 | 2 |
epithelial cell of lung | 4.17e-10 | 19 |
hepatocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 7.72e-21 | 1 |
iris | 7.72e-21 | 1 |
respiratory system epithelium | 8.33e-12 | 28 |
respiratory tract epithelium | 4.17e-10 | 19 |
lung epithelium | 4.17e-10 | 19 |
lung | 8.25e-09 | 22 |
respiratory tube | 8.25e-09 | 22 |
respiration organ | 8.25e-09 | 22 |
pair of lungs | 8.25e-09 | 22 |
lung primordium | 8.25e-09 | 22 |
lung bud | 8.25e-09 | 22 |
endo-epithelium | 1.16e-08 | 82 |
foregut | 3.73e-08 | 87 |
segment of respiratory tract | 3.69e-07 | 47 |
trunk region element | 5.38e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.25e-12 | 15 |
respiratory system cancer | 6.99e-12 | 16 |