FFCP PHASE1:Hg19::chr6:29911057..29911122,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:29911057..29911122,+
|short_description=p2@HLA-A
|description=CAGE_peak_2_at_HLA-A_5end
|association_with_transcript=0bp_to_uc011dmd.1_5end
|EntrezGene=31...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3105 | |EntrezGene=3105 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4931 | |HGNC=4931 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011dmd.1_5end | |||
|cluster_id=chr6:29911057..29911122,+ | |||
|description=CAGE_peak_2_at_HLA-A_5end | |||
|id=chr6:29911057..29911122,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.27e-27!140;CL:0002087!3.17e-26!119;CL:0002031!1.72e-23!124;CL:0002057!6.17e-21!42;CL:0002009!3.97e-19!65;CL:0002194!6.66e-19!63;CL:0000576!6.66e-19!63;CL:0000040!6.66e-19!63;CL:0000559!6.66e-19!63;CL:0000766!1.44e-18!76;CL:0000860!3.31e-17!45;CL:0000557!2.03e-16!71;CL:0000839!3.70e-16!70;CL:0000988!3.84e-16!182;CL:0000037!5.34e-16!172;CL:0000566!5.34e-16!172;CL:0002032!2.44e-15!165;CL:0000837!2.44e-15!165;CL:0000134!2.09e-11!358;CL:0000048!1.84e-10!430;CL:0002320!3.41e-10!365;CL:0000034!1.35e-09!444;CL:0000723!1.79e-09!436;CL:0000219!7.36e-09!390;CL:0000763!1.85e-08!112;CL:0000049!1.85e-08!112;CL:0000791!2.88e-08!18;CL:0000789!2.88e-08!18;CL:0002420!2.88e-08!18;CL:0002419!2.88e-08!18;CL:0000790!2.88e-08!18;CL:0000838!1.14e-07!52;CL:0000542!1.36e-07!53;CL:0000051!1.36e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.18e-21;33!CL:0002057;9.18e-21;33!CL:0000473;5.56e-20;39!CL:0000234;5.56e-20;39!CL:0000576;2.76e-15;48!CL:0000766;2.93e-11;69!CL:0002087;6.87e-10;104!CL:0000791;4.17e-09;18!CL:0000789;4.17e-09;18!CL:0002419;4.17e-09;18!CL:0000738;5.72e-08;136!CL:0000084;9.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.19e-32,115;CL:0000738,4.10e-32,136;CL:0002031,1.17e-28,120;CL:0000473,1.74e-27,48;CL:0000234,1.74e-27,48;CL:0002194,3.86e-26,59;CL:0000576,3.86e-26,59;CL:0000040,3.86e-26,59;CL:0000559,3.86e-26,59;CL:0002009,8.31e-26,61;CL:0000860,3.34e-24,42;CL:0002057,3.34e-24,42;CL:0000766,3.62e-24,72;CL:0000557,6.22e-22,67;CL:0000839,2.11e-21,66;CL:0000037,1.71e-19,168;CL:0000988,4.33e-19,177;CL:0002032,9.50e-19,161;CL:0000837,9.50e-19,161;CL:0000134,4.86e-14,354;CL:0002320,6.43e-13,361;CL:0000048,4.99e-12,427;CL:0000034,1.11e-11,441;CL:0000723,2.20e-11,433;CL:0000219,2.58e-11,386;CL:0000763,3.77e-11,108;CL:0000049,3.77e-11,108;CL:0000791,3.43e-09,18;CL:0000789,3.43e-09,18;CL:0002420,3.43e-09,18;CL:0002419,3.43e-09,18;CL:0000790,3.43e-09,18;CL:0000838,2.67e-08,52;CL:0000542,6.85e-08,53;CL:0000051,6.85e-08,53;CL:0000084,6.90e-07,25;CL:0000827,6.90e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-18;42!CL:0000790;4.17e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.05e-21!102;UBERON:0003061!3.05e-21!102;UBERON:0002193!7.04e-21!112;UBERON:0002371!4.42e-16!80;UBERON:0001474!7.26e-14!86;UBERON:0002405!6.18e-13!115;UBERON:0003081!1.19e-11!216;UBERON:0004765!1.17e-10!101;UBERON:0001434!1.17e-10!101;UBERON:0002384!8.42e-10!375;UBERON:0002204!1.84e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.61e-26,98;UBERON:0003061,3.61e-26,98;UBERON:0002193,8.83e-26,108;UBERON:0002371,2.84e-21,76;UBERON:0002405,4.27e-21,93;UBERON:0001474,2.92e-18,82;UBERON:0003081,3.13e-15,203;UBERON:0004765,2.61e-14,90;UBERON:0001434,3.10e-13,100;UBERON:0002384,2.02e-12,371;UBERON:0000926,1.89e-09,315;UBERON:0004120,1.89e-09,315;UBERON:0006603,1.89e-09,315;UBERON:0002204,2.31e-08,167 | |||
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| ||
|short_description=p2@HLA-A | |||
}} | }} |
Latest revision as of 15:06, 17 September 2015
Short description: | p2@HLA-A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLA-A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011dmd.1_5end |
EntrezGene: | HLA-A |
HGNC: | 4931 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.61e-26 | 98 |
blood island | 3.61e-26 | 98 |
hemolymphoid system | 8.83e-26 | 108 |
bone marrow | 2.84e-21 | 76 |
immune system | 4.27e-21 | 93 |
bone element | 2.92e-18 | 82 |
lateral plate mesoderm | 3.13e-15 | 203 |
skeletal element | 2.61e-14 | 90 |
skeletal system | 3.10e-13 | 100 |
connective tissue | 2.02e-12 | 371 |
mesoderm | 1.89e-09 | 315 |
mesoderm-derived structure | 1.89e-09 | 315 |
presumptive mesoderm | 1.89e-09 | 315 |
musculoskeletal system | 2.31e-08 | 167 |