FFCP PHASE1:Hg19::chr20:62669472..62669483,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27655 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000463337_5end | |||
|cluster_id=chr20:62669472..62669483,+ | |||
|description=CAGE_peak_7_at_LINC00176_5end | |||
|id=chr20:62669472..62669483,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.67e-17!24;CL:0000115!7.12e-17!35;CL:0002078!1.74e-12!44;CL:0000071!2.05e-12!18;CL:0002546!2.05e-12!18;CL:0000213!3.98e-11!57;CL:0000215!3.98e-11!57;CL:0002618!2.01e-08!3;CL:1000413!8.39e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.21e-15;2!CL:1000398;2.21e-15;2!CL:0002327;1.82e-08;4!CL:0002188;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.05e-15,2;CL:1000398,2.05e-15,2;CL:0002327,1.82e-08,4;CL:0002188,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.99e-30;1 | |||
|ontology_enrichment_disease=DOID:5093!8.53e-07!4;DOID:1612!8.53e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.82e-08;4!DOID:1612;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.82e-08,4;DOID:1612,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.05e-12!18;UBERON:0004638!2.05e-12!18;UBERON:0004852!2.05e-12!18;UBERON:0000487!9.51e-10!22;UBERON:0006914!2.57e-08!25;UBERON:0003915!8.39e-07!9;UBERON:0004700!8.39e-07!9;UBERON:0001917!8.39e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.21e-15;2!UBERON:0003497;2.21e-15;2!UBERON:0003909;2.21e-15;2!UBERON:0003835;2.21e-15;2!UBERON:0002331;2.58e-12;10!UBERON:0001280;1.04e-10;3!UBERON:0004647;1.04e-10;3!UBERON:0000178;1.56e-08;15!UBERON:0000179;1.56e-08;15!UBERON:0000463;1.56e-08;15!UBERON:0000353;1.71e-08;15!UBERON:0001911;1.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.05e-15,2;UBERON:0003497,2.05e-15,2;UBERON:0003909,2.05e-15,2;UBERON:0003835,2.05e-15,2;UBERON:0002331,2.37e-12,10;UBERON:0000358,2.37e-12,10;UBERON:0000307,2.37e-12,10;UBERON:0000091,2.37e-12,10;UBERON:0000087,2.37e-12,10;UBERON:0007010,2.37e-12,10;UBERON:0007806,2.37e-12,10;UBERON:0008780,2.37e-12,10;UBERON:0005728,2.37e-12,10;UBERON:0001280,9.90e-11,3;UBERON:0004647,9.90e-11,3;UBERON:0005171,9.90e-11,3;UBERON:0000178,1.47e-08,15;UBERON:0000179,1.47e-08,15;UBERON:0000463,1.47e-08,15;UBERON:0000353,1.78e-08,15;UBERON:0001911,1.82e-08,4;UBERON:0005333,1.82e-08,4;UBERON:0008425,1.82e-08,4;UBERON:0005311,1.82e-08,4;UBERON:0000058,6.97e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.780356085359269,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0.976248230192678,0,0.81014194788176,0.446498641420399,0.673588117878509,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,3.06109999986685,0,0,0,0.709163045303809,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0.889563386041866,1.97702302314405,2.8193926366473,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0.599037001496973,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.452122368852043,0.186224142887574,0,0,0,0.217716747896961,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@LINC00176 | |||
}} |
Latest revision as of 15:10, 17 September 2015
Short description: | p7@LINC00176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LINC00176_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000463337_5end |
EntrezGene: | NA |
HGNC: | 27655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.05e-15 | 2 |
endothelial cell of hepatic sinusoid | 2.05e-15 | 2 |
mammary gland epithelial cell | 1.82e-08 | 4 |
glomerular endothelial cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.05e-15 | 2 |
abdomen blood vessel | 2.05e-15 | 2 |
sinusoid | 2.05e-15 | 2 |
abdominal segment blood vessel | 2.05e-15 | 2 |
umbilical cord | 2.37e-12 | 10 |
blastocyst | 2.37e-12 | 10 |
blastula | 2.37e-12 | 10 |
bilaminar disc | 2.37e-12 | 10 |
inner cell mass | 2.37e-12 | 10 |
cleaving embryo | 2.37e-12 | 10 |
connecting stalk | 2.37e-12 | 10 |
inner cell mass derived epiblast | 2.37e-12 | 10 |
extraembryonic mesoderm | 2.37e-12 | 10 |
liver parenchyma | 9.90e-11 | 3 |
liver lobule | 9.90e-11 | 3 |
hepatic duct | 9.90e-11 | 3 |
blood | 1.47e-08 | 15 |
haemolymphatic fluid | 1.47e-08 | 15 |
organism substance | 1.47e-08 | 15 |
parenchyma | 1.78e-08 | 15 |
mammary gland | 1.82e-08 | 4 |
mammary bud | 1.82e-08 | 4 |
mammary ridge | 1.82e-08 | 4 |
mammary placode | 1.82e-08 | 4 |
duct | 6.97e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.82e-08 | 4 |
breast cancer | 1.82e-08 | 4 |