FFCP PHASE1:Hg19::chr3:196065341..196065356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116211 | |EntrezGene=116211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25167 | |HGNC=25167 | ||
|TSSclassifier=strong | |||
|UniProt=E9PH22 | |UniProt=E9PH22 | ||
|association_with_transcript=17bp_to_ENST00000454715_5end | |||
|cluster_id=chr3:196065341..196065356,- | |||
|coexpression_cluster_id=C3462 | |||
|description=CAGE_peak_4_at_TM4SF19_5end | |||
|id=chr3:196065341..196065356,- | |||
|ontology_enrichment_celltype=CL:0002194!2.41e-40!63;CL:0000576!2.41e-40!63;CL:0000040!2.41e-40!63;CL:0000559!2.41e-40!63;CL:0002009!1.32e-38!65;CL:0000839!1.07e-34!70;CL:0000557!5.54e-34!71;CL:0000766!6.54e-34!76;CL:0000860!3.43e-32!45;CL:0002057!1.45e-31!42;CL:0000763!1.14e-21!112;CL:0000049!1.14e-21!112;CL:0002087!1.22e-18!119;CL:0002031!2.27e-16!124;CL:0000738!4.11e-15!140;CL:0002032!2.78e-12!165;CL:0000837!2.78e-12!165;CL:0000037!9.00e-12!172;CL:0000566!9.00e-12!172;CL:0000988!8.19e-11!182;CL:0000063!2.49e-10!578;CL:0000235!4.33e-09!10;CL:0000548!2.31e-08!679;CL:0000004!2.31e-08!679;CL:0000255!2.31e-08!679;CL:0000012!3.65e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.62e-92;39!CL:0000234;4.62e-92;39!CL:0000860;6.26e-89;33!CL:0002057;6.26e-89;33!CL:0000576;5.41e-43;48!CL:0000766;6.16e-33;69!CL:0000235;4.24e-24;6!CL:0000763;1.36e-16;100!CL:0002087;2.26e-11;104!CL:0000738;6.67e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.07e-96,48;CL:0000234,1.07e-96,48;CL:0002194,1.32e-84,59;CL:0000576,1.32e-84,59;CL:0000040,1.32e-84,59;CL:0000559,1.32e-84,59;CL:0002009,1.39e-81,61;CL:0000860,3.63e-75,42;CL:0002057,3.63e-75,42;CL:0000839,8.13e-75,66;CL:0000557,1.39e-73,67;CL:0000766,6.43e-68,72;CL:0000763,1.79e-42,108;CL:0000049,1.79e-42,108;CL:0002087,8.77e-42,115;CL:0002031,1.13e-39,120;CL:0000738,5.88e-34,136;CL:0002032,2.75e-27,161;CL:0000837,2.75e-27,161;CL:0000037,8.95e-26,168;CL:0000235,3.85e-24,6;CL:0000988,5.27e-24,177;CL:0000134,1.40e-09,354;CL:0000219,2.49e-09,386;CL:0002320,3.27e-09,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-56;42!CL:0000049;1.38e-14;108 | |||
|ontology_enrichment_disease=DOID:305!9.73e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.25e-28!80;UBERON:0001474!2.64e-25!86;UBERON:0002390!3.76e-21!102;UBERON:0003061!3.76e-21!102;UBERON:0004765!2.00e-20!101;UBERON:0001434!2.00e-20!101;UBERON:0002405!5.21e-20!115;UBERON:0002193!7.37e-20!112;UBERON:0002204!1.58e-09!167;UBERON:0000062!2.22e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.45e-64,76;UBERON:0001474,1.23e-58,82;UBERON:0002405,1.37e-53,93;UBERON:0004765,1.11e-52,90;UBERON:0002390,1.10e-47,98;UBERON:0003061,1.10e-47,98;UBERON:0001434,1.46e-46,100;UBERON:0002193,6.13e-45,108;UBERON:0002204,2.32e-24,167;UBERON:0003081,1.81e-18,203;UBERON:0000926,1.61e-09,315;UBERON:0004120,1.61e-09,315;UBERON:0006603,1.61e-09,315;UBERON:0002384,1.03e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0.868043482863407,0.223915474239924,2.59114932815184,0,2.4717700592526,4.1566353805769,1.69808842831471,3.95129362739664,8.22335776043652,13.3173739484895,3.74000110018796,4.09857130446561,2.83778675866302,4.82643953031266,8.39130088658974,2.70852973188684,4.32957380947991,5.18521685109907,3.82029923556644,2.75475503133812,2.88836124368484,1.91801137739712,1.31940520074686,3.98927315243264,2.13112375266347,3.19230162491442,5.6738522469114,4.9825779919646,5.7787193009051,7.30076085788282,3.04064382587163,2.42159801053347,3.31449872388808,1.26584954976354,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.696518949197069,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0.702254033511242,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502644862058154,0,0,0,0,0,0,0.144366447761074,0,0,0,0,5.17055712783534,3.97807250736704,5.49935300468294,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,6.02708509718552,6.32501818449095,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.762520775695299,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,3.29607748453519,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.37950746544837,0,4.85295548414462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.0967563312890851,0,0.246346371159628,0,0,0,2.05562886970126,2.38457534043588,0,0,1.12222348352147,0,0,0,0,0,0.14405479798815,2.11229310461235,0,0.135904206073614,0.941425616810999,0,0.866851769704557,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0.704815022316672,0.747511887973863,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,1.34833881285112,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0.883445729729405,0,0,0,1.72715170865599,2.43087964941906,0,0,0,0,0,0.245772908753719,0.845248493434508,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,2.721636016803,3.74938980940294,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0.999411559249289,0,2.82315897372553,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.713921808193872,0,0.827054095813604,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0.868043482863407,0.223915474239924,2.59114932815184,0,2.4717700592526,4.1566353805769,1.69808842831471,3.95129362739664,8.22335776043652,13.3173739484895,3.74000110018796,4.09857130446561,2.83778675866302,4.82643953031266,8.39130088658974,2.70852973188684,4.32957380947991,5.18521685109907,3.82029923556644,2.75475503133812,2.88836124368484,1.91801137739712,1.31940520074686,3.98927315243264,2.13112375266347,3.19230162491442,5.6738522469114,4.9825779919646,5.7787193009051,7.30076085788282,3.04064382587163,2.42159801053347,3.31449872388808,1.26584954976354,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.696518949197069,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0.702254033511242,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502644862058154,0,0,0,0,0,0,0.144366447761074,0,0,0,0,5.17055712783534,3.97807250736704,5.49935300468294,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,6.02708509718552,6.32501818449095,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.762520775695299,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,3.29607748453519,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.37950746544837,0,4.85295548414462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.0967563312890851,0,0.246346371159628,0,0,0,2.05562886970126,2.38457534043588,0,0,1.12222348352147,0,0,0,0,0,0.14405479798815,2.11229310461235,0,0.135904206073614,0.941425616810999,0,0.866851769704557,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0.704815022316672,0.747511887973863,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,1.34833881285112,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0.883445729729405,0,0,0,1.72715170865599,2.43087964941906,0,0,0,0,0,0.245772908753719,0.845248493434508,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,2.721636016803,3.74938980940294,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0.999411559249289,0,2.82315897372553,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.713921808193872,0,0.827054095813604,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@TM4SF19 | |||
}} | }} |
Latest revision as of 15:23, 17 September 2015
Short description: | p4@TM4SF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TM4SF19_5end |
Coexpression cluster: | C3462_Monocytederived_CD14_Macrophage_extraskeletal_schwannoma_Dendritic_Osteoblast |
Association with transcript: | 17bp_to_ENST00000454715_5end |
EntrezGene: | TM4SF19 |
HGNC: | 25167 |
UniProt: | E9PH22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.07e-96 | 48 |
phagocyte | 1.07e-96 | 48 |
monopoietic cell | 1.32e-84 | 59 |
monocyte | 1.32e-84 | 59 |
monoblast | 1.32e-84 | 59 |
promonocyte | 1.32e-84 | 59 |
macrophage dendritic cell progenitor | 1.39e-81 | 61 |
classical monocyte | 3.63e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-75 | 42 |
myeloid lineage restricted progenitor cell | 8.13e-75 | 66 |
granulocyte monocyte progenitor cell | 1.39e-73 | 67 |
myeloid leukocyte | 6.43e-68 | 72 |
myeloid cell | 1.79e-42 | 108 |
common myeloid progenitor | 1.79e-42 | 108 |
nongranular leukocyte | 8.77e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-39 | 120 |
leukocyte | 5.88e-34 | 136 |
hematopoietic oligopotent progenitor cell | 2.75e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.75e-27 | 161 |
hematopoietic stem cell | 8.95e-26 | 168 |
macrophage | 3.85e-24 | 6 |
hematopoietic cell | 5.27e-24 | 177 |
mesenchymal cell | 1.40e-09 | 354 |
motile cell | 2.49e-09 | 386 |
connective tissue cell | 3.27e-09 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.45e-64 | 76 |
bone element | 1.23e-58 | 82 |
immune system | 1.37e-53 | 93 |
skeletal element | 1.11e-52 | 90 |
hematopoietic system | 1.10e-47 | 98 |
blood island | 1.10e-47 | 98 |
skeletal system | 1.46e-46 | 100 |
hemolymphoid system | 6.13e-45 | 108 |
musculoskeletal system | 2.32e-24 | 167 |
lateral plate mesoderm | 1.81e-18 | 203 |
mesoderm | 1.61e-09 | 315 |
mesoderm-derived structure | 1.61e-09 | 315 |
presumptive mesoderm | 1.61e-09 | 315 |
connective tissue | 1.03e-08 | 371 |