FFCP PHASE1:Hg19::chr20:9049742..9049765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5332 | |EntrezGene=5332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9059 | |HGNC=9059 | ||
|TSSclassifier=strong | |||
|UniProt=B1AJW2 | |UniProt=B1AJW2 | ||
|association_with_transcript=0bp_to_ENST00000437503_5end | |association_with_transcript=0bp_to_ENST00000437503_5end | ||
|cluster_id=chr20:9049742..9049765,+ | |||
|coexpression_cluster_id=C1071 | |||
|description=CAGE_peak_5_at_PLCB4_5end | |description=CAGE_peak_5_at_PLCB4_5end | ||
|id=chr20:9049742..9049765,+ | |id=chr20:9049742..9049765,+ | ||
|ontology_enrichment_celltype=CL:1000497!3.37e-09!18;CL:0002518!3.37e-09!18;CL:1000507!1.73e-08!12;CL:1000494!1.73e-08!12;CL:1000449!5.52e-08!16;CL:0002620!1.07e-07!23 | |ontology_enrichment_celltype=CL:1000497!3.37e-09!18;CL:0002518!3.37e-09!18;CL:1000507!1.73e-08!12;CL:1000494!1.73e-08!12;CL:1000449!5.52e-08!16;CL:0002620!1.07e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.31e-17;10!CL:1000494;3.31e-17;10!CL:1000497;7.31e-16;17!CL:0002518;7.31e-16;17!CL:1000449;2.71e-15;15!CL:0002681;4.74e-11;12!CL:0002584;4.74e-11;12!CL:0002556;6.16e-08;6!CL:0000239;6.13e-07;3!CL:1000615;6.13e-07;3!CL:0002306;6.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.87e-17,10;CL:1000494,1.87e-17,10;CL:1000497,4.55e-16,17;CL:0002518,4.55e-16,17;CL:1000449,1.65e-15,15;CL:0002681,3.13e-11,12;CL:0002584,3.13e-11,12;CL:0002556,7.14e-08,6;CL:0000057,1.21e-07,76;CL:0000239,5.48e-07,3;CL:1000615,5.48e-07,3;CL:0002306,5.48e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.38e-07;4!UBERON:0007284;4.38e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.47e-13!347;UBERON:0007023!6.69e-13!115;UBERON:0000062!4.07e-12!511;UBERON:0000475!2.04e-11!365;UBERON:0000153!5.48e-11!129;UBERON:0007811!5.48e-11!129;UBERON:0004121!1.37e-10!169;UBERON:0000033!1.86e-10!123;UBERON:0000489!6.33e-10!32;UBERON:0000924!8.41e-10!173;UBERON:0006601!8.41e-10!173;UBERON:0000064!4.06e-09!219;UBERON:0002113!5.05e-09!27;UBERON:0003918!5.05e-09!27;UBERON:0005095!5.05e-09!27;UBERON:0007687!5.05e-09!27;UBERON:0000080!7.55e-09!18;UBERON:0002120!7.55e-09!18;UBERON:0004875!7.55e-09!18;UBERON:0005721!7.55e-09!18;UBERON:0005754!7.55e-09!18;UBERON:0007297!7.55e-09!18;UBERON:0004876!9.14e-09!20;UBERON:0000477!1.12e-08!286;UBERON:0000467!1.46e-08!625;UBERON:0006555!1.62e-08!17;UBERON:0005103!1.62e-08!17;UBERON:0000083!1.62e-08!17;UBERON:0009201!1.62e-08!17;UBERON:0004819!1.62e-08!17;UBERON:0006553!1.62e-08!17;UBERON:0003074!1.62e-08!17;UBERON:0003060!1.62e-08!17;UBERON:0009773!1.73e-08!12;UBERON:0001231!1.73e-08!12;UBERON:0004810!1.73e-08!12;UBERON:0000480!1.89e-08!626;UBERON:0000073!2.64e-08!94;UBERON:0001016!2.64e-08!94;UBERON:0000468!4.95e-08!659;UBERON:0004211!5.52e-08!16;UBERON:0001285!5.52e-08!16;UBERON:0007684!5.52e-08!16;UBERON:0003220!5.52e-08!16;UBERON:0004208!5.52e-08!16;UBERON:0003075!6.86e-08!86;UBERON:0007284!6.86e-08!86;UBERON:0005743!7.60e-08!86;UBERON:0001017!1.03e-07!82;UBERON:0003102!1.07e-07!95;UBERON:0001049!1.15e-07!57;UBERON:0005068!1.15e-07!57;UBERON:0006241!1.15e-07!57;UBERON:0007135!1.15e-07!57;UBERON:0003887!1.71e-07!21;UBERON:0002346!5.87e-07!90;UBERON:0003129!6.04e-07!11;UBERON:0001737!8.29e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.31e-17;10!UBERON:0009773;3.31e-17;10!UBERON:0001231;3.31e-17;10!UBERON:0004810;3.31e-17;10!UBERON:0006555;2.71e-15;15!UBERON:0004819;2.71e-15;15!UBERON:0001285;2.71e-15;15!UBERON:0007684;2.71e-15;15!UBERON:0001225;4.74e-11;12!UBERON:0008987;4.74e-11;12!UBERON:0002113;3.12e-10;24!UBERON:0011143;3.12e-10;24!UBERON:0000489;3.46e-09;29!UBERON:0001851;1.90e-08;15!UBERON:0000353;1.90e-08;15!UBERON:0001758;6.16e-08;6!UBERON:0003672;6.16e-08;6!UBERON:0006554;1.52e-07;30!UBERON:0001008;1.52e-07;30!UBERON:0011137;2.15e-07;11!UBERON:0010323;2.15e-07;11!UBERON:0006853;6.13e-07;3!UBERON:0007685;6.13e-07;3!UBERON:0004134;6.13e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.87e-17,10;UBERON:0006555,1.34e-16,16;UBERON:0004819,1.34e-16,16;UBERON:0004211,1.65e-15,15;UBERON:0009773,1.65e-15,15;UBERON:0001231,1.65e-15,15;UBERON:0001285,1.65e-15,15;UBERON:0007684,1.65e-15,15;UBERON:0004208,1.65e-15,15;UBERON:0001225,3.13e-11,12;UBERON:0008987,3.13e-11,12;UBERON:0002113,1.03e-10,26;UBERON:0003918,1.03e-10,26;UBERON:0011143,1.03e-10,26;UBERON:0005095,1.03e-10,26;UBERON:0007687,1.03e-10,26;UBERON:0000489,1.13e-09,31;UBERON:0001851,1.38e-08,15;UBERON:0000353,1.38e-08,15;UBERON:0001758,7.14e-08,6;UBERON:0003672,7.14e-08,6;UBERON:0010323,2.14e-07,11;UBERON:0006853,5.48e-07,3;UBERON:0007685,5.48e-07,3;UBERON:0004134,5.48e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,2.21160542851358,1.39560233594486,0,0,0,0.331397375727916,0,0,0,0.975865597581014,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.189069634328136,0.886917589850256,0.966182642624386,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0.662045904066094,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.702254033511242,2.24569588380383,1.35117749042945,0.516628905878827,3.56400857184616,8.40707559547093,0,0,1.17835279767846,0.875829639103749,8.86605169549385,2.19488810440419,4.90380473278431,6.30999847407706,0,16.6832361190642,1.92201649936711,0.423863802319124,4.20127534518163,1.54578793857658,15.973713482829,4.46680455195816,0.506328996723799,0.292311015483596,6.56327813034698,1.84099797284599,0.323292113637624,7.81021103536552,3.12331504505685,0.508681776931463,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,11.5783368874719,0,0.464367928031979,0,2.36613600079688,1.18009283054671,0.964044119533928,1.65440959098591,1.08939722046203,0.949082476444386,1.07865046528132,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.115930404975077,1.52631302506568,0,0,0.380508304469197,0,0,0,0,0,0.93733833986777,2.18376766658517,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0.239624855491583,0,0,6.22559618670591,0.410952645100767,5.37182889719687,0,0,0,0,0.76228387266739,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,8.94274704582471,20.8761916892679,42.1065448140606,29.402495163171,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,2.25599806453706,3.46569016969866,3.92174884588428,1.46139224653261,4.22206515571503,0,0,2.59099099322567,0,1.89662506280697,2.50844886927427,8.41091701048626,4.98645605357235,6.71624264166535,0,0,0.256450125116389,0,0,0,5.31102895946392,7.01330749324998,0,0,0,0,0,0,0.275673144969061,0.214840489736547,0,0.340906509664404,0,0,0.384380134730212,2.80747967488085,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0.762520775695299,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,0.140669416410513,1.11308705022906,0,0,0.796991953004279,1.65770349318689,0.251932747854276,0,0,4.0435146396035,0,0,0,0.493217028184668,0,1.11136990144637,0.969332746095218,0,0,0,0.962059999958153,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,6.10326945268333,4.53374965718021,2.06883333267483,0.658156191461918,0,0,0.538651809526579,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,26.3747580660034,12.0792278037769,0,1.51472047819464,0,0.265372693510018,0.611030144933625,0,0,0,0.269604531922708,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,0,0.61214552326098,0.126373159256976,0.450970258243478,0,0,0,0,0,0.569219092059585,0,0,0,0,1.04836000945218,4.29965081179041,0,0,0,0.193978032976839,0,2.03382666702479,1.78154502040776,0.596143835108969,0.253243183823515,0,0.480952921509202,0,0.19980960958213,0,0.343609788497747,0,0,0,0,0.951329442515298,0.941425616810999,0.101998217636322,0.288950589901519,0,0,0,0,0,2.79282401272254,1.14580212005842,2.15361907373044,0.199679000498991,0,0,0.53746777989381,1.08089965062721,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.236417121897595,0.262272940674991,0,0,0.191915197319445,1.42939065274673,0,0,0,0,0,0,0,4.08931252285012,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0.342173675768659,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.554645257684261,0.745156835296601,0,0,0.303298235083296,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0,0.310525913752519,0,0,2.08698024724694,0.150257608997218,0,1.22061219961398,0,0.322231671127465,0,0.398095888698616,14.8010272925367,0,0,2.52369796457302,0.385239660814607,0,0,1.58694147858591,3.24131464053368,6.11841761266169,25.0724377514082,0,0.877136198314828,0.353378291891762,1.54331230616732,1.68942440653073,7.43100403905046,0.345430341731199,0,0.553033744606923,0,0,0,0,2.70350199629091,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,3.05786986937639,0,0,0,0.558644917973244,1.59002175326709,0,3.20228299314188,1.76337971845342,3.36870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| ||
|short_description=p5@PLCB4 | |short_description=p5@PLCB4 | ||
}} | }} |
Latest revision as of 16:56, 17 September 2015
Short description: | p5@PLCB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLCB4_5end |
Coexpression cluster: | C1071_renal_serous_Olfactory_clear_mesothelioma_Fibroblast_mesenchymal |
Association with transcript: | 0bp_to_ENST00000437503_5end |
EntrezGene: | PLCB4 |
HGNC: | 9059 |
UniProt: | B1AJW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.87e-17 | 10 |
nephron tubule epithelial cell | 1.87e-17 | 10 |
kidney cell | 4.55e-16 | 17 |
kidney epithelial cell | 4.55e-16 | 17 |
epithelial cell of nephron | 1.65e-15 | 15 |
kidney cortical cell | 3.13e-11 | 12 |
renal cortical epithelial cell | 3.13e-11 | 12 |
fibroblast of periodontium | 7.14e-08 | 6 |
fibroblast | 1.21e-07 | 76 |
brush border epithelial cell | 5.48e-07 | 3 |
kidney cortex tubule cell | 5.48e-07 | 3 |
epithelial cell of proximal tubule | 5.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.87e-17 | 10 |
excretory tube | 1.34e-16 | 16 |
kidney epithelium | 1.34e-16 | 16 |
nephron epithelium | 1.65e-15 | 15 |
renal tubule | 1.65e-15 | 15 |
nephron tubule | 1.65e-15 | 15 |
nephron | 1.65e-15 | 15 |
uriniferous tubule | 1.65e-15 | 15 |
nephrogenic mesenchyme | 1.65e-15 | 15 |
cortex of kidney | 3.13e-11 | 12 |
renal parenchyma | 3.13e-11 | 12 |
kidney | 1.03e-10 | 26 |
kidney mesenchyme | 1.03e-10 | 26 |
upper urinary tract | 1.03e-10 | 26 |
kidney rudiment | 1.03e-10 | 26 |
kidney field | 1.03e-10 | 26 |
cavitated compound organ | 1.13e-09 | 31 |
cortex | 1.38e-08 | 15 |
parenchyma | 1.38e-08 | 15 |
periodontium | 7.14e-08 | 6 |
dentition | 7.14e-08 | 6 |
cranial skeletal system | 2.14e-07 | 11 |
renal cortex tubule | 5.48e-07 | 3 |
region of nephron tubule | 5.48e-07 | 3 |
proximal tubule | 5.48e-07 | 3 |