FFCP PHASE1:Hg19::chr17:75284055..75284080,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:75284055..75284080,+ to FFCP PHASE1:Hg19::chr17:75284055..75284080,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |UniProt=Q9UHD8 | ||
|association_with_transcript=82bp_to_ENST00000449803,NM_001113492,uc002jtt.3_5end | |||
|cluster_id=chr17:75284055..75284080,+ | |||
|description=CAGE_peak_20_at_SEPT9_5end | |||
|id=chr17:75284055..75284080,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.75e-15!254;CL:0000223!4.52e-13!59;CL:0002076!3.74e-12!43;CL:0000220!6.73e-08!246;CL:0002321!1.42e-07!248;CL:0000055!7.98e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.71e-08;6!CL:0002255;2.71e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.77e-14,253;CL:0000223,1.61e-10,58;CL:0002149,3.42e-08,6;CL:0002255,3.42e-08,6;CL:0002076,5.03e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.77e-09;29!CL:0000223;3.79e-07;58 | |||
|ontology_enrichment_disease=DOID:305!2.85e-14!106;DOID:0050687!1.06e-13!143;DOID:162!1.72e-07!235;DOID:14566!5.12e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.71e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.26e-18,143;DOID:305,2.78e-17,106;DOID:162,2.03e-11,235;DOID:14566,9.67e-11,239;DOID:3001,3.42e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000481!2.74e-20!347;UBERON:0003104!9.83e-20!238;UBERON:0009142!9.83e-20!238;UBERON:0001007!1.01e-17!155;UBERON:0001555!1.01e-17!155;UBERON:0007026!1.01e-17!155;UBERON:0004119!1.73e-17!169;UBERON:0000925!1.73e-17!169;UBERON:0006595!1.73e-17!169;UBERON:0001048!2.94e-15!168;UBERON:0000077!3.32e-15!130;UBERON:0001041!1.50e-14!98;UBERON:0002100!2.60e-14!216;UBERON:0004921!7.61e-14!129;UBERON:0004185!7.61e-14!129;UBERON:0000475!1.62e-13!365;UBERON:0001004!3.25e-13!72;UBERON:0000466!4.47e-11!126;UBERON:0005256!1.15e-10!143;UBERON:0005177!4.96e-10!107;UBERON:0000062!8.92e-10!511;UBERON:0000072!1.16e-09!46;UBERON:0000065!1.77e-09!53;UBERON:0008947!3.76e-09!38;UBERON:0003258!3.76e-09!38;UBERON:0005911!5.51e-09!82;UBERON:0001737!7.17e-08!9;UBERON:0000464!8.05e-08!104;UBERON:0000926!1.22e-07!448;UBERON:0004120!1.22e-07!448;UBERON:0006603!1.22e-07!448;UBERON:0000477!1.82e-07!286;UBERON:0000467!2.55e-07!625;UBERON:0000480!3.41e-07!626;UBERON:0000468!3.44e-07!659;UBERON:0000161!4.24e-07!35;UBERON:0005153!5.95e-07!37;UBERON:0002050!8.68e-07!605;UBERON:0005423!8.68e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.66e-12;9!UBERON:0001557;5.66e-12;9!UBERON:0000072;1.65e-08;37!UBERON:0002423;2.92e-08;25!UBERON:0002294;4.86e-07;7!UBERON:0001173;4.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,3.18e-13,87;UBERON:0001737,7.68e-12,9;UBERON:0004921,1.24e-10,118;UBERON:0001007,5.71e-10,145;UBERON:0001555,5.71e-10,145;UBERON:0007026,5.71e-10,145;UBERON:0008947,1.54e-09,38;UBERON:0003258,1.54e-09,38;UBERON:0000072,1.92e-09,47;UBERON:0001048,4.82e-09,160;UBERON:0005177,1.17e-08,101;UBERON:0007499,1.89e-08,25;UBERON:0004119,3.47e-08,160;UBERON:0000925,3.47e-08,160;UBERON:0006595,3.47e-08,160;UBERON:0001557,3.83e-08,19;UBERON:0009497,4.02e-08,25;UBERON:0000015,4.02e-08,25;UBERON:0002423,4.02e-08,25;UBERON:0006235,4.02e-08,25;UBERON:0004161,4.02e-08,25;UBERON:0009856,5.91e-08,26;UBERON:0002100,2.29e-07,199;UBERON:0000065,2.59e-07,54;UBERON:0005911,8.49e-07,82 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.22866968250754,0.697801167972428,0.436882744260345,1.05506791291381,3.58922423584135,2.31978163009541,0.672325146451775,0.602694528023977,0.730310090387373,0,3.0780264519197,5.30401797235058,1.25381888591235,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,2.53007406669196,1.00267582127178,1.30361867064741,0,2.43317435151318,2.17430079477356,3.99112915432615,2.19586964232815,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0.506522046658319,0.264818361626438,0,0.354668382198357,1.12135520028461,2.1349799145941,5.67335361359468,0.933633106199299,0.404132016209064,0.326923806226917,1.36221684880438,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.368502951935304,0.516628905878827,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0.438977620880838,2.45190236639216,1.20190447125277,1.02088964844019,1.25572744982203,1.49490172172997,0.211931901159562,0.300091096084402,0.206105058476878,2.83404594050192,1.48893485065272,0,0.0974370051611986,0.504867548488229,0.736399189138395,0,1.06502877754984,1.20902517873168,0.67824236924195,0.966304265816484,0.272746120590835,0.573609190778008,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,0,2.16563844500876,5.32380600179297,4.21461725195254,5.06123162755312,4.19117096383097,4.35758888184812,6.40630671599961,5.79774625088707,4.70931516300831,5.00171304030308,0,0,0.8231480226628,2.94017422771084,6.33775174109154,16.7080626835196,4.72631925345123,0,0,1.88724591328378,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,1.99594780200897,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.671928512795438,0.141775097242386,1.25381931783988,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.4400297149257,0.904902010304444,0,0,0,1.04007436911366,2.82928111688356,4.25547396069835,3.99633268524149,1.00084595560703,0,0,0.325736184293735,0.710783897485092,0,0,0.871533458600294,0.199945982364114,0,0,0,1.4377491329495,0,2.85273810081437,2.60606352001643,5.95881335396112,4.47652408099739,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,2.20844685094452,3.00102312635806,0.813795071099207,0,0.356857977594324,0.157702415033935,0.35142424497814,1.80567659836631,2.27407504055985,0,0.664225598535437,5.34670588770939,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0,0.348631135379878,0,1.60405176242628,0.460404944679482,0.574072240823034,0.910455840033585,0.131124414959424,0.902399225814824,0.539107359730903,1.56869953835371,1.46139224653261,1.37217117560738,0,0,0.863663664408557,0,4.06419656315779,3.01013864312912,0.764628819135115,0,1.34324852833307,0,0,0.256450125116389,0,0.650756789328606,1.13345112812495,2.01452822600355,1.98022799809411,0,0,0,0.193341436584244,0.462145851343933,0.307007349452259,0.275673144969061,0.429680979473094,0.145016693914229,0.170453254832202,1.69160867728801,0.826424576804891,0.384380134730212,0.893288987462089,0.708104465988849,2.78907329578371,0.62962469366128,2.0911118104818,0.308033580176089,1.59691809095107,0.869932992075073,0.74129687641568,0.143124886741991,0,0.949138274156178,1.5250415513906,0.767693373934002,0,0,0,0.359744915166629,0.274537029736055,0.471249609382746,0.606547444719948,1.58510321173008,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.392996164052485,0,0,0,0,0,0.349934720244983,0.288666338176536,2.01090682660736,3.26672954583968,1.03558180854457,1.72202149068492,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,3.97790605528978,0,0.890894042497916,0.307160702099232,0,0,0.445234820091624,0,0,0,0,0,0,0,0,1.43789361835723,4.29650819221462,0,0.0986434056369336,0,5.55684950723184,0,0,0,2.86470537193757,4.63537999979837,2.17499872630438,0.910347586283997,5.84783395673362,6.61885508950222,0,0,0,0,0,0,0,0.295547618953547,0,2.61452312445576,0.139423744278603,1.07730361905316,1.36730467016401,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,2.40773294189637,0,0,0.782658475728359,2.91336455440911,0,0,0,0.126373159256976,0,0,9.30515421790059,4.63388738225698,8.47618879699508,2.38944859545918,4.26914319044689,4.02156551738102,2.2562765983567,0.195984794828755,2.96001302373369,1.39781334593624,1.0319161948297,5.61186721476694,6.35877058649814,5.91231290783106,0.0969890164884194,1.323841900372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| ||
|short_description=p20@SEPT9 | |||
}} | }} |
Latest revision as of 18:10, 17 September 2015
Short description: | p20@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SEPT9_5end |
Coexpression cluster: | NA |
Association with transcript: | 82bp_to_ENST00000449803, NM_001113492, uc002jtt.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.77e-14 | 253 |
endodermal cell | 1.61e-10 | 58 |
epithelial cell of uterus | 3.42e-08 | 6 |
stromal cell of endometrium | 3.42e-08 | 6 |
endo-epithelial cell | 5.03e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
foregut | 3.18e-13 | 87 |
larynx | 7.68e-12 | 9 |
subdivision of digestive tract | 1.24e-10 | 118 |
digestive system | 5.71e-10 | 145 |
digestive tract | 5.71e-10 | 145 |
primitive gut | 5.71e-10 | 145 |
respiratory primordium | 1.54e-09 | 38 |
endoderm of foregut | 1.54e-09 | 38 |
segment of respiratory tract | 1.92e-09 | 47 |
primordium | 4.82e-09 | 160 |
trunk region element | 1.17e-08 | 101 |
epithelial sac | 1.89e-08 | 25 |
endoderm-derived structure | 3.47e-08 | 160 |
endoderm | 3.47e-08 | 160 |
presumptive endoderm | 3.47e-08 | 160 |
upper respiratory tract | 3.83e-08 | 19 |
epithelium of foregut-midgut junction | 4.02e-08 | 25 |
anatomical boundary | 4.02e-08 | 25 |
hepatobiliary system | 4.02e-08 | 25 |
foregut-midgut junction | 4.02e-08 | 25 |
septum transversum | 4.02e-08 | 25 |
sac | 5.91e-08 | 26 |
trunk | 2.29e-07 | 199 |
respiratory tract | 2.59e-07 | 54 |
endo-epithelium | 8.49e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.26e-18 | 143 |
carcinoma | 2.78e-17 | 106 |
cancer | 2.03e-11 | 235 |
disease of cellular proliferation | 9.67e-11 | 239 |
female reproductive endometrioid cancer | 3.42e-08 | 6 |