FFCP PHASE1:Hg19::chr6:31239434..31239487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3107 | |EntrezGene=3107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4933 | |HGNC=4933 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=339bp_to_ENST00000487245,uc003nsx.2_5end | |association_with_transcript=339bp_to_ENST00000487245,uc003nsx.2_5end | ||
|cluster_id=chr6:31239434..31239487,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_2_at_HLA-C_5end | |description=CAGE_peak_2_at_HLA-C_5end | ||
|id=chr6:31239434..31239487,- | |id=chr6:31239434..31239487,- | ||
|ontology_enrichment_celltype=CL:0000738!7.65e-41!140;CL:0002087!2.36e-35!119;CL:0002031!7.01e-33!124;CL:0000766!1.88e-27!76;CL:0002009!2.55e-25!65;CL:0002194!1.17e-24!63;CL:0000576!1.17e-24!63;CL:0000040!1.17e-24!63;CL:0000559!1.17e-24!63;CL:0000037!1.28e-24!172;CL:0000566!1.28e-24!172;CL:0002057!1.44e-24!42;CL:0000988!6.58e-24!182;CL:0002032!3.26e-23!165;CL:0000837!3.26e-23!165;CL:0000557!6.89e-23!71;CL:0000860!3.41e-22!45;CL:0000839!3.71e-22!70;CL:0000048!7.35e-17!430;CL:0000134!3.58e-16!358;CL:0002320!2.26e-15!365;CL:0000723!3.10e-15!436;CL:0000034!1.09e-14!444;CL:0000763!4.85e-13!112;CL:0000049!4.85e-13!112;CL:0000219!5.97e-11!390;CL:0000838!3.15e-10!52;CL:0000542!3.16e-10!53;CL:0000051!3.16e-10!53;CL:0000791!5.10e-08!18;CL:0000789!5.10e-08!18;CL:0002420!5.10e-08!18;CL:0002419!5.10e-08!18;CL:0000790!5.10e-08!18;CL:0000084!4.22e-07!25;CL:0000827!4.22e-07!25 | |ontology_enrichment_celltype=CL:0000738!7.65e-41!140;CL:0002087!2.36e-35!119;CL:0002031!7.01e-33!124;CL:0000766!1.88e-27!76;CL:0002009!2.55e-25!65;CL:0002194!1.17e-24!63;CL:0000576!1.17e-24!63;CL:0000040!1.17e-24!63;CL:0000559!1.17e-24!63;CL:0000037!1.28e-24!172;CL:0000566!1.28e-24!172;CL:0002057!1.44e-24!42;CL:0000988!6.58e-24!182;CL:0002032!3.26e-23!165;CL:0000837!3.26e-23!165;CL:0000557!6.89e-23!71;CL:0000860!3.41e-22!45;CL:0000839!3.71e-22!70;CL:0000048!7.35e-17!430;CL:0000134!3.58e-16!358;CL:0002320!2.26e-15!365;CL:0000723!3.10e-15!436;CL:0000034!1.09e-14!444;CL:0000763!4.85e-13!112;CL:0000049!4.85e-13!112;CL:0000219!5.97e-11!390;CL:0000838!3.15e-10!52;CL:0000542!3.16e-10!53;CL:0000051!3.16e-10!53;CL:0000791!5.10e-08!18;CL:0000789!5.10e-08!18;CL:0002420!5.10e-08!18;CL:0002419!5.10e-08!18;CL:0000790!5.10e-08!18;CL:0000084!4.22e-07!25;CL:0000827!4.22e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-20;33!CL:0002057;1.14e-20;33!CL:0000473;4.64e-20;39!CL:0000234;4.64e-20;39!CL:0000576;7.10e-17;48!CL:0000766;2.01e-14;69!CL:0002087;3.99e-11;104!CL:0000738;1.17e-10;136!CL:0000791;1.07e-08;18!CL:0000789;1.07e-08;18!CL:0002419;1.07e-08;18!CL:0000084;1.04e-07;25!CL:0000219;1.46e-07;193!CL:0000542;9.91e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.12e-46,136;CL:0002087,4.87e-41,115;CL:0002031,2.70e-37,120;CL:0000766,6.11e-33,72;CL:0002009,3.14e-31,61;CL:0000473,5.69e-31,48;CL:0000234,5.69e-31,48;CL:0002194,1.71e-30,59;CL:0000576,1.71e-30,59;CL:0000040,1.71e-30,59;CL:0000559,1.71e-30,59;CL:0000037,3.45e-29,168;CL:0000557,5.56e-28,67;CL:0000988,7.06e-28,177;CL:0002032,1.29e-27,161;CL:0000837,1.29e-27,161;CL:0000860,1.37e-27,42;CL:0002057,1.37e-27,42;CL:0000839,2.50e-26,66;CL:0000048,1.60e-18,427;CL:0000134,5.99e-18,354;CL:0002320,3.69e-17,361;CL:0000723,4.26e-17,433;CL:0000763,1.74e-16,108;CL:0000049,1.74e-16,108;CL:0000034,2.09e-16,441;CL:0000219,6.77e-13,386;CL:0000542,1.05e-10,53;CL:0000051,1.05e-10,53;CL:0000838,1.06e-10,52;CL:0000791,7.24e-09,18;CL:0000789,7.24e-09,18;CL:0002420,7.24e-09,18;CL:0002419,7.24e-09,18;CL:0000790,7.24e-09,18;CL:0000084,1.11e-07,25;CL:0000827,1.11e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.54e-20;42!CL:0000790;1.07e-08;18!CL:0000051;9.91e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-26!102;UBERON:0003061!2.02e-26!102;UBERON:0002193!2.01e-24!112;UBERON:0002371!1.35e-21!80;UBERON:0001474!4.93e-19!86;UBERON:0003081!8.35e-18!216;UBERON:0002405!3.22e-17!115;UBERON:0002384!5.51e-15!375;UBERON:0004765!2.40e-14!101;UBERON:0001434!2.40e-14!101;UBERON:0002204!2.46e-12!167;UBERON:0000178!6.24e-07!15;UBERON:0000179!6.24e-07!15;UBERON:0000463!6.24e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.02e-26!102;UBERON:0003061!2.02e-26!102;UBERON:0002193!2.01e-24!112;UBERON:0002371!1.35e-21!80;UBERON:0001474!4.93e-19!86;UBERON:0003081!8.35e-18!216;UBERON:0002405!3.22e-17!115;UBERON:0002384!5.51e-15!375;UBERON:0004765!2.40e-14!101;UBERON:0001434!2.40e-14!101;UBERON:0002204!2.46e-12!167;UBERON:0000178!6.24e-07!15;UBERON:0000179!6.24e-07!15;UBERON:0000463!6.24e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.62e-07;15!UBERON:0000179;1.62e-07;15!UBERON:0000463;1.62e-07;15 | |||
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| ||
|short_description=p2@HLA-C | |short_description=p2@HLA-C | ||
}} | }} |
Latest revision as of 20:07, 17 September 2015
Short description: | p2@HLA-C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLA-C_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 339bp_to_ENST00000487245, uc003nsx.2_5end |
EntrezGene: | HLA-C |
HGNC: | 4933 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.05e-31 | 98 |
blood island | 3.05e-31 | 98 |
hemolymphoid system | 4.71e-28 | 108 |
bone marrow | 1.12e-26 | 76 |
bone element | 7.87e-24 | 82 |
lateral plate mesoderm | 1.21e-21 | 203 |
immune system | 1.23e-21 | 93 |
skeletal element | 2.57e-20 | 90 |
skeletal system | 3.34e-18 | 100 |
connective tissue | 4.57e-17 | 371 |
musculoskeletal system | 1.72e-15 | 167 |
mesoderm | 2.14e-11 | 315 |
mesoderm-derived structure | 2.14e-11 | 315 |
presumptive mesoderm | 2.14e-11 | 315 |
blood | 1.23e-07 | 15 |
haemolymphatic fluid | 1.23e-07 | 15 |
organism substance | 1.23e-07 | 15 |