FFCP PHASE1:Hg19::chr6:31324943..31324963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3106 | |EntrezGene=3106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4932 | |HGNC=4932 | ||
|TSSclassifier=strong | |||
|UniProt=P01889,P30480,P30486,Q29836,Q31610,Q31612,B4DUK6,F5H017 | |UniProt=P01889,P30480,P30486,Q29836,Q31610,Q31612,B4DUK6,F5H017 | ||
|association_with_transcript=0bp_to_ENST00000412585,ENST00000428231,ENST00000452596,ENST00000498007_5end | |association_with_transcript=0bp_to_ENST00000412585,ENST00000428231,ENST00000452596,ENST00000498007_5end | ||
|cluster_id=chr6:31324943..31324963,- | |||
|coexpression_cluster_id=C4591 | |||
|description=CAGE_peak_1_at_HLA-B_5end | |description=CAGE_peak_1_at_HLA-B_5end | ||
|id=chr6:31324943..31324963,- | |id=chr6:31324943..31324963,- | ||
|ontology_enrichment_celltype=CL:0000738!6.62e-43!140;CL:0002087!1.52e-37!119;CL:0002031!1.11e-33!124;CL:0000037!3.47e-29!172;CL:0000566!3.47e-29!172;CL:0000988!3.07e-28!182;CL:0002032!8.27e-28!165;CL:0000837!8.27e-28!165;CL:0000766!1.36e-26!76;CL:0002057!3.68e-25!42;CL:0002009!9.74e-24!65;CL:0002194!3.00e-23!63;CL:0000576!3.00e-23!63;CL:0000040!3.00e-23!63;CL:0000559!3.00e-23!63;CL:0000557!1.51e-22!71;CL:0000860!8.36e-21!45;CL:0000839!2.03e-20!70;CL:0000763!5.63e-15!112;CL:0000049!5.63e-15!112;CL:0000542!1.12e-12!53;CL:0000051!1.12e-12!53;CL:0000838!1.96e-12!52;CL:0000134!2.83e-10!358;CL:0002320!2.22e-09!365;CL:0000048!6.61e-09!430;CL:0000791!3.34e-08!18;CL:0000789!3.34e-08!18;CL:0002420!3.34e-08!18;CL:0002419!3.34e-08!18;CL:0000790!3.34e-08!18;CL:0000723!8.91e-08!436;CL:0000034!3.33e-07!444;CL:0000084!5.10e-07!25;CL:0000827!5.10e-07!25 | |ontology_enrichment_celltype=CL:0000738!6.62e-43!140;CL:0002087!1.52e-37!119;CL:0002031!1.11e-33!124;CL:0000037!3.47e-29!172;CL:0000566!3.47e-29!172;CL:0000988!3.07e-28!182;CL:0002032!8.27e-28!165;CL:0000837!8.27e-28!165;CL:0000766!1.36e-26!76;CL:0002057!3.68e-25!42;CL:0002009!9.74e-24!65;CL:0002194!3.00e-23!63;CL:0000576!3.00e-23!63;CL:0000040!3.00e-23!63;CL:0000559!3.00e-23!63;CL:0000557!1.51e-22!71;CL:0000860!8.36e-21!45;CL:0000839!2.03e-20!70;CL:0000763!5.63e-15!112;CL:0000049!5.63e-15!112;CL:0000542!1.12e-12!53;CL:0000051!1.12e-12!53;CL:0000838!1.96e-12!52;CL:0000134!2.83e-10!358;CL:0002320!2.22e-09!365;CL:0000048!6.61e-09!430;CL:0000791!3.34e-08!18;CL:0000789!3.34e-08!18;CL:0002420!3.34e-08!18;CL:0002419!3.34e-08!18;CL:0000790!3.34e-08!18;CL:0000723!8.91e-08!436;CL:0000034!3.33e-07!444;CL:0000084!5.10e-07!25;CL:0000827!5.10e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.51e-18;33!CL:0002057;3.51e-18;33!CL:0000473;1.83e-17;39!CL:0000234;1.83e-17;39!CL:0000576;3.00e-15;48!CL:0000766;1.52e-13;69!CL:0002087;6.68e-12;104!CL:0000738;5.36e-10;136!CL:0000791;3.33e-08;18!CL:0000789;3.33e-08;18!CL:0002419;3.33e-08;18!CL:0000542;1.36e-07;53!CL:0000084;5.14e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.60e-46,136;CL:0002087,1.47e-40,115;CL:0002031,2.15e-36,120;CL:0000037,3.45e-31,168;CL:0000988,2.18e-30,177;CL:0000766,7.15e-30,72;CL:0002032,8.40e-30,161;CL:0000837,8.40e-30,161;CL:0000473,7.95e-28,48;CL:0000234,7.95e-28,48;CL:0002009,3.91e-27,61;CL:0002194,1.13e-26,59;CL:0000576,1.13e-26,59;CL:0000040,1.13e-26,59;CL:0000559,1.13e-26,59;CL:0000557,1.31e-25,67;CL:0000860,3.68e-25,42;CL:0002057,3.68e-25,42;CL:0000839,2.69e-23,66;CL:0000763,1.13e-16,108;CL:0000049,1.13e-16,108;CL:0000542,1.12e-12,53;CL:0000051,1.12e-12,53;CL:0000838,1.96e-12,52;CL:0000134,2.98e-11,354;CL:0002320,2.66e-10,361;CL:0000048,1.08e-09,427;CL:0000723,1.70e-08,433;CL:0000791,3.34e-08,18;CL:0000789,3.34e-08,18;CL:0002420,3.34e-08,18;CL:0002419,3.34e-08,18;CL:0000790,3.34e-08,18;CL:0000034,6.86e-08,441;CL:0000084,5.10e-07,25;CL:0000827,5.10e-07,25;CL:0000219,6.57e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.28e-18;42!CL:0000790;3.33e-08;18!CL:0000051;1.36e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.02e-31!112;UBERON:0002390!1.82e-30!102;UBERON:0003061!1.82e-30!102;UBERON:0002371!6.76e-21!80;UBERON:0001474!1.14e-18!86;UBERON:0002405!2.40e-18!115;UBERON:0003081!6.76e-15!216;UBERON:0004765!6.59e-13!101;UBERON:0001434!6.59e-13!101;UBERON:0002384!9.71e-10!375;UBERON:0002204!5.48e-09!167;UBERON:0000178!1.64e-08!15;UBERON:0000179!1.64e-08!15;UBERON:0000463!1.64e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-08;15!UBERON:0000179;1.64e-08;15!UBERON:0000463;1.64e-08;15!UBERON:0002390;2.81e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.15e-34,108;UBERON:0002390,2.24e-33,98;UBERON:0003061,2.24e-33,98;UBERON:0002405,1.59e-26,93;UBERON:0002371,1.50e-23,76;UBERON:0001474,5.35e-21,82;UBERON:0003081,1.44e-17,203;UBERON:0004765,1.93e-16,90;UBERON:0001434,2.90e-13,100;UBERON:0002384,1.12e-10,371;UBERON:0000926,1.00e-09,315;UBERON:0004120,1.00e-09,315;UBERON:0006603,1.00e-09,315;UBERON:0002204,4.52e-09,167;UBERON:0000178,1.64e-08,15;UBERON:0000179,1.64e-08,15;UBERON:0000463,1.64e-08,15 | |||
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| ||
|short_description=p1@HLA-B | |short_description=p1@HLA-B | ||
}} | }} |
Latest revision as of 20:23, 17 September 2015
Short description: | p1@HLA-B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-B_5end |
Coexpression cluster: | C4591_Neutrophils_Basophils_Eosinophils_migratory_CD14_CD4_CD8 |
Association with transcript: | 0bp_to_ENST00000412585, ENST00000428231, ENST00000452596, ENST00000498007_5end |
EntrezGene: | HLA-B |
HGNC: | 4932 |
UniProt: | P01889P30480P30486Q29836Q31610Q31612B4DUK6F5H017 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.15e-34 | 108 |
hematopoietic system | 2.24e-33 | 98 |
blood island | 2.24e-33 | 98 |
immune system | 1.59e-26 | 93 |
bone marrow | 1.50e-23 | 76 |
bone element | 5.35e-21 | 82 |
lateral plate mesoderm | 1.44e-17 | 203 |
skeletal element | 1.93e-16 | 90 |
skeletal system | 2.90e-13 | 100 |
connective tissue | 1.12e-10 | 371 |
mesoderm | 1.00e-09 | 315 |
mesoderm-derived structure | 1.00e-09 | 315 |
presumptive mesoderm | 1.00e-09 | 315 |
musculoskeletal system | 4.52e-09 | 167 |
blood | 1.64e-08 | 15 |
haemolymphatic fluid | 1.64e-08 | 15 |
organism substance | 1.64e-08 | 15 |