FFCP PHASE1:Hg19::chr8:28748157..28748175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79618 | |EntrezGene=79618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26137 | |HGNC=26137 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGZ2 | |UniProt=E5RGZ2 | ||
|association_with_transcript=15bp_to_ENST00000519047,ENST00000521516_5end | |association_with_transcript=15bp_to_ENST00000519047,ENST00000521516_5end | ||
|cluster_id=chr8:28748157..28748175,+ | |||
|description=CAGE_peak_3_at_HMBOX1_5end | |description=CAGE_peak_3_at_HMBOX1_5end | ||
|id=chr8:28748157..28748175,+ | |id=chr8:28748157..28748175,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;4.96e-15;8!DOID:3095;7.27e-07;22!DOID:2994;7.27e-07;22 | |ontology_enrichment_disease_v019=DOID:1036;4.96e-15;8!DOID:3095;7.27e-07;22!DOID:2994;7.27e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,7.99e-16,8;DOID:8692,4.49e-07,31;DOID:3095,7.43e-07,22;DOID:2994,7.43e-07,22;DOID:1240,7.67e-07,39;DOID:171,8.89e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.65e-16!57;UBERON:0005068!1.65e-16!57;UBERON:0006241!1.65e-16!57;UBERON:0007135!1.65e-16!57;UBERON:0001017!3.01e-16!82;UBERON:0000073!1.39e-15!94;UBERON:0001016!1.39e-15!94;UBERON:0002780!3.95e-15!41;UBERON:0001890!3.95e-15!41;UBERON:0006240!3.95e-15!41;UBERON:0005743!5.33e-15!86;UBERON:0002616!1.60e-14!59;UBERON:0003080!2.80e-14!42;UBERON:0002346!3.26e-14!90;UBERON:0000955!3.69e-14!69;UBERON:0006238!3.69e-14!69;UBERON:0007023!2.04e-13!115;UBERON:0003075!4.02e-13!86;UBERON:0007284!4.02e-13!86;UBERON:0002020!2.55e-12!34;UBERON:0003528!2.55e-12!34;UBERON:0001893!2.88e-12!34;UBERON:0002791!5.37e-12!33;UBERON:0003056!9.92e-12!61;UBERON:0001869!2.25e-11!32;UBERON:0002619!1.57e-08!22;UBERON:0000956!2.16e-08!25;UBERON:0000203!2.16e-08!25;UBERON:0001950!3.64e-08!20;UBERON:0000924!5.74e-08!173;UBERON:0006601!5.74e-08!173;UBERON:0000153!1.03e-07!129;UBERON:0007811!1.03e-07!129;UBERON:0004121!3.17e-07!169;UBERON:0000033!6.92e-07!123 | |ontology_enrichment_uberon=UBERON:0001049!1.65e-16!57;UBERON:0005068!1.65e-16!57;UBERON:0006241!1.65e-16!57;UBERON:0007135!1.65e-16!57;UBERON:0001017!3.01e-16!82;UBERON:0000073!1.39e-15!94;UBERON:0001016!1.39e-15!94;UBERON:0002780!3.95e-15!41;UBERON:0001890!3.95e-15!41;UBERON:0006240!3.95e-15!41;UBERON:0005743!5.33e-15!86;UBERON:0002616!1.60e-14!59;UBERON:0003080!2.80e-14!42;UBERON:0002346!3.26e-14!90;UBERON:0000955!3.69e-14!69;UBERON:0006238!3.69e-14!69;UBERON:0007023!2.04e-13!115;UBERON:0003075!4.02e-13!86;UBERON:0007284!4.02e-13!86;UBERON:0002020!2.55e-12!34;UBERON:0003528!2.55e-12!34;UBERON:0001893!2.88e-12!34;UBERON:0002791!5.37e-12!33;UBERON:0003056!9.92e-12!61;UBERON:0001869!2.25e-11!32;UBERON:0002619!1.57e-08!22;UBERON:0000956!2.16e-08!25;UBERON:0000203!2.16e-08!25;UBERON:0001950!3.64e-08!20;UBERON:0000924!5.74e-08!173;UBERON:0006601!5.74e-08!173;UBERON:0000153!1.03e-07!129;UBERON:0007811!1.03e-07!129;UBERON:0004121!3.17e-07!169;UBERON:0000033!6.92e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.45e-11;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;7.45e-11;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.44e-10,89;UBERON:0001049,1.72e-09,56;UBERON:0005068,1.72e-09,56;UBERON:0006241,1.72e-09,56;UBERON:0007135,1.72e-09,56;UBERON:0001017,9.54e-09,81;UBERON:0000073,4.39e-08,53;UBERON:0002616,4.39e-08,53;UBERON:0002780,6.15e-08,41;UBERON:0001890,6.15e-08,41;UBERON:0003080,6.15e-08,41;UBERON:0006240,6.15e-08,41;UBERON:0000955,7.41e-07,68;UBERON:0006238,7.41e-07,68 | |||
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| ||
|short_description=p3@HMBOX1 | |short_description=p3@HMBOX1 | ||
}} | }} |
Latest revision as of 21:03, 17 September 2015
Short description: | p3@HMBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HMBOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000519047, ENST00000521516_5end |
EntrezGene: | HMBOX1 |
HGNC: | 26137 |
UniProt: | E5RGZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 6.44e-10 | 89 |
neural tube | 1.72e-09 | 56 |
neural rod | 1.72e-09 | 56 |
future spinal cord | 1.72e-09 | 56 |
neural keel | 1.72e-09 | 56 |
central nervous system | 9.54e-09 | 81 |
regional part of nervous system | 4.39e-08 | 53 |
regional part of brain | 4.39e-08 | 53 |
regional part of forebrain | 6.15e-08 | 41 |
forebrain | 6.15e-08 | 41 |
anterior neural tube | 6.15e-08 | 41 |
future forebrain | 6.15e-08 | 41 |
brain | 7.41e-07 | 68 |
future brain | 7.41e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.99e-16 | 8 |
myeloid leukemia | 4.49e-07 | 31 |
germ cell and embryonal cancer | 7.43e-07 | 22 |
germ cell cancer | 7.43e-07 | 22 |
leukemia | 7.67e-07 | 39 |
neuroectodermal tumor | 8.89e-07 | 10 |