FFCP PHASE1:Hg19::chr7:23749897..23749908,+: Difference between revisions
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|id=chr7:23749897..23749908,+
|short_description=p5@STK31
|description=CAGE_peak_5_at_STK31_5end
|association_with_transcript=3bp_to_ENST00000433467_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56164 | |EntrezGene=56164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11407 | |HGNC=11407 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZ06 | |UniProt=B4DZ06 | ||
|association_with_transcript=3bp_to_ENST00000433467_5end | |||
|cluster_id=chr7:23749897..23749908,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_STK31_5end | |||
|id=chr7:23749897..23749908,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.14e-23!4;CL:0002253!2.07e-12!2;CL:0002231!1.21e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002253;8.10e-26;2!CL:0002563;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,9.18e-26,2;CL:0002563,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.44e-25!8;UBERON:0001242!5.14e-23!4;UBERON:0001262!5.14e-23!4;UBERON:0004786!5.14e-23!4;UBERON:0004808!5.14e-23!4;UBERON:0001277!5.14e-23!4;UBERON:0003135!8.15e-19!11;UBERON:0003350!1.24e-18!5;UBERON:0003101!1.70e-16!22;UBERON:0000079!1.70e-16!22;UBERON:0000485!8.37e-11!9;UBERON:0000991!3.46e-10!21;UBERON:0009196!3.46e-10!21;UBERON:0009117!3.46e-10!21;UBERON:0005564!3.46e-10!21;UBERON:0004176!9.40e-10!22;UBERON:0000344!2.46e-08!12;UBERON:0000060!2.46e-08!12;UBERON:0000160!1.01e-07!27;UBERON:0001052!7.70e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0001052;1.21e-13;4!UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0004907;3.42e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001155;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0001052,1.29e-13,4;UBERON:0001242,1.29e-13,4;UBERON:0001262,1.29e-13,4;UBERON:0004786,1.29e-13,4;UBERON:0004808,1.29e-13,4;UBERON:0001277,1.29e-13,4;UBERON:0004907,3.60e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003350,1.80e-07,8;UBERON:0001155,8.85e-07,9;UBERON:0000485,8.85e-07,9 | |||
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|short_description=p5@STK31 | |||
}} | }} |
Latest revision as of 21:15, 17 September 2015
Short description: | p5@STK31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_STK31_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 3bp_to_ENST00000433467_5end |
EntrezGene: | STK31 |
HGNC: | 11407 |
UniProt: | B4DZ06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 9.18e-26 | 2 |
intestinal epithelial cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
rectum | 1.29e-13 | 4 |
intestinal mucosa | 1.29e-13 | 4 |
wall of intestine | 1.29e-13 | 4 |
gastrointestinal system mucosa | 1.29e-13 | 4 |
gastrointestinal system epithelium | 1.29e-13 | 4 |
intestinal epithelium | 1.29e-13 | 4 |
lower digestive tract | 3.60e-11 | 5 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
epithelium of mucosa | 1.80e-07 | 8 |
colon | 8.85e-07 | 9 |
simple columnar epithelium | 8.85e-07 | 9 |