FFCP PHASE1:Hg19::chr2:163175584..163175606,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:163175584..163175606,+
|short_description=p5@GCA
|description=CAGE_peak_5_at_GCA_5end
|association_with_transcript=40bp_to_ENST00000429691_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25801 | |EntrezGene=25801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15990 | |HGNC=15990 | ||
|TSSclassifier=strong | |||
|UniProt=C9JV47 | |UniProt=C9JV47 | ||
|association_with_transcript=40bp_to_ENST00000429691_5end | |||
|cluster_id=chr2:163175584..163175606,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_GCA_5end | |||
|id=chr2:163175584..163175606,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.54e-68!140;CL:0002031!8.39e-59!124;CL:0000037!1.98e-57!172;CL:0000566!1.98e-57!172;CL:0000988!2.22e-56!182;CL:0002087!3.25e-56!119;CL:0002032!4.30e-56!165;CL:0000837!4.30e-56!165;CL:0000766!7.16e-45!76;CL:0000557!5.07e-39!71;CL:0000839!5.48e-38!70;CL:0002009!8.05e-38!65;CL:0002057!8.19e-37!42;CL:0000860!2.80e-36!45;CL:0002194!3.64e-36!63;CL:0000576!3.64e-36!63;CL:0000040!3.64e-36!63;CL:0000559!3.64e-36!63;CL:0000763!6.80e-36!112;CL:0000049!6.80e-36!112;CL:0000838!7.10e-18!52;CL:0000542!2.64e-17!53;CL:0000051!2.64e-17!53;CL:0000945!5.45e-16!24;CL:0000826!5.45e-16!24;CL:0000134!1.14e-13!358;CL:0002320!9.05e-13!365;CL:0000219!4.90e-10!390;CL:0000094!7.94e-08!8;CL:0000048!2.34e-07!430;CL:0000034!3.15e-07!444;CL:0000723!3.86e-07!436;CL:0000081!6.69e-07!11;CL:0000236!8.71e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.68e-39;33!CL:0002057;1.68e-39;33!CL:0000945;9.55e-29;24!CL:0000473;2.68e-28;39!CL:0000234;2.68e-28;39!CL:0000576;1.53e-21;48!CL:0000766;1.90e-19;69!CL:0002087;3.55e-18;104!CL:0000094;2.55e-14;8!CL:0000081;7.57e-14;11!CL:0000738;2.95e-11;136!CL:0000763;7.35e-11;100!CL:0000542;7.51e-11;53!CL:0000236;2.47e-10;13!CL:0000623;1.33e-09;3!CL:0000988;9.71e-09;177!CL:0000771;6.44e-08;2!CL:0000219;1.79e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.63e-60,136;CL:0002032,7.33e-51,161;CL:0000837,7.33e-51,161;CL:0002087,1.25e-48,115;CL:0002031,1.99e-48,120;CL:0000037,3.24e-48,168;CL:0000988,3.40e-47,177;CL:0000860,2.85e-41,42;CL:0002057,2.85e-41,42;CL:0000766,2.59e-39,72;CL:0000473,3.40e-38,48;CL:0000234,3.40e-38,48;CL:0002194,4.05e-29,59;CL:0000576,4.05e-29,59;CL:0000040,4.05e-29,59;CL:0000559,4.05e-29,59;CL:0000945,6.51e-29,24;CL:0000826,6.51e-29,24;CL:0000763,1.34e-28,108;CL:0000049,1.34e-28,108;CL:0002009,5.98e-28,61;CL:0000839,1.56e-27,66;CL:0000557,5.08e-27,67;CL:0000838,1.48e-20,52;CL:0000542,4.60e-20,53;CL:0000051,4.60e-20,53;CL:0000134,4.14e-16,354;CL:0002320,1.52e-15,361;CL:0000094,1.92e-14,8;CL:0000081,5.96e-14,11;CL:0000219,1.47e-13,386;CL:0000236,2.07e-12,14;CL:0000048,6.89e-12,427;CL:0000034,8.26e-12,441;CL:0000723,1.53e-11,433;CL:0000623,8.05e-10,3;CL:0000825,8.05e-10,3;CL:0000771,6.46e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.93e-28;42!CL:0000051;7.51e-11;53!CL:0000049;1.08e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.56e-43!102;UBERON:0003061!4.56e-43!102;UBERON:0002193!4.25e-39!112;UBERON:0002371!2.77e-35!80;UBERON:0001474!2.59e-31!86;UBERON:0002405!5.18e-26!115;UBERON:0004765!2.12e-25!101;UBERON:0001434!2.12e-25!101;UBERON:0002384!5.85e-12!375;UBERON:0003081!6.75e-10!216;UBERON:0002204!2.09e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.24e-25,76;UBERON:0001474,1.59e-22,82;UBERON:0002390,1.80e-22,98;UBERON:0003061,1.80e-22,98;UBERON:0002405,1.33e-20,93;UBERON:0004765,6.83e-20,90;UBERON:0002193,1.16e-19,108;UBERON:0001434,3.40e-17,100;UBERON:0002384,8.93e-15,371;UBERON:0002204,2.23e-08,167;UBERON:0003081,1.12e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8074188368443,5.17233713534658,5.82459781721226,3.14691421479123,1.91914699048606,0.77408061658038,0,0,0,0.387336002901508,4.40724620711007,0.587200878669695,1.66198622559563,1.00272223735071,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.697287110717054,2.46700732813095,0.309706370895104,3.16461631554365,2.30544635876191,4.7296445977717,6.55016793399575,5.16387746867061,2.70852973188684,0.564727018627814,1.09162460023138,0.898893937780338,18.0589496498833,14.7627352455003,20.4587880255693,0.989553900560148,1.59570926097305,2.13112375266347,21.1852744198866,10.2129340444405,14.3249117268982,1.7587406567972,1.0429658368404,3.69221035998698,21.1889825921679,29.4622108790052,45.2541214040465,0,1.06302149982522,0.628975936525128,0.44931452458598,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0,0,1.09227722252426,2.66852776159066,2.98711155796555,0.400395987036012,1.14950487990897,1.98313461835459,0,0,1.17447437874188,1.91136614062614,1.32171328579026,0.560508562981536,0,1.37696839079683,0.393010762749165,0.411202997999018,0,0,0,0,0.557052284425868,0,0.443067789167242,0.270803863765016,0.384273959177026,0.780356085359269,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0.604820229674197,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,11.6334079244498,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674338760312407,0,0.220587945464788,0.217879444092406,0,0.674156540800822,0.588664395376038,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.984868024349589,0.936017060556951,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.264145302039678,0.207328115540772,0.288239906833923,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,2.56139988262505,1.94064817373566,1.54011643535698,0,0,0,0,0,5.99205619157746,0,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19342140668156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.822724546172388,0.648473311192717,0,0.79312517629427,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0.191505370132367,1.48171507906718,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,3.67763168115679,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0.102268682502155,1.96935688737711,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,7.70954934569617,0.741383633679017,0.522109747527277,0,0,0,0,0,0,0,0,0,0,5.26131967950724,0,0,0,0,0,0.284609546029793,0,0,0,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,1.03082936549324,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0.415440338029185,0.449947783103001,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,1.82688897571344,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.643324774124777,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.779441235357554,1.46151324344699,1.96278473107013,0,0,0,0.59996218756479,0.106691729694141,1.03328987796489,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,1.49804183822513,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.754814217833368,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,1.39917618294901,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.193766729508018,0.372448285775147,0,0,0,0,0,0.0673520530145875,0.2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| ||
|short_description=p5@GCA | |||
}} | }} |
Latest revision as of 21:54, 17 September 2015
Short description: | p5@GCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GCA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 40bp_to_ENST00000429691_5end |
EntrezGene: | GCA |
HGNC: | 15990 |
UniProt: | C9JV47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.24e-25 | 76 |
bone element | 1.59e-22 | 82 |
hematopoietic system | 1.80e-22 | 98 |
blood island | 1.80e-22 | 98 |
immune system | 1.33e-20 | 93 |
skeletal element | 6.83e-20 | 90 |
hemolymphoid system | 1.16e-19 | 108 |
skeletal system | 3.40e-17 | 100 |
connective tissue | 8.93e-15 | 371 |
musculoskeletal system | 2.23e-08 | 167 |
lateral plate mesoderm | 1.12e-07 | 203 |