FFCP PHASE1:Hg19::chr11:3818756..3818793,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:3818756..3818793,-
|short_description=p1@NUP98
|description=CAGE_peak_1_at_NUP98_5end
|association_with_transcript=0bp_to_ENST00000397004,ENST00000397007,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4928 | |EntrezGene=4928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8068 | |HGNC=8068 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNN0 | |UniProt=E9PNN0 | ||
|association_with_transcript=0bp_to_ENST00000397004,ENST00000397007,ENST00000532475_5end | |||
|cluster_id=chr11:3818756..3818793,- | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_1_at_NUP98_5end | |||
|id=chr11:3818756..3818793,- | |||
|ontology_enrichment_celltype=CL:0000037!8.26e-41!172;CL:0000566!8.26e-41!172;CL:0002032!6.71e-39!165;CL:0000837!6.71e-39!165;CL:0000988!6.84e-36!182;CL:0000763!4.08e-33!112;CL:0000049!4.08e-33!112;CL:0000738!5.86e-33!140;CL:0002031!2.55e-26!124;CL:0000766!2.54e-24!76;CL:0002087!5.63e-24!119;CL:0000557!2.43e-21!71;CL:0000839!3.07e-20!70;CL:0000860!6.38e-19!45;CL:0002009!9.38e-19!65;CL:0002057!1.32e-18!42;CL:0002194!1.16e-17!63;CL:0000576!1.16e-17!63;CL:0000040!1.16e-17!63;CL:0000559!1.16e-17!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.36e-17;33!CL:0002057;4.36e-17;33!CL:0000473;9.99e-13;39!CL:0000234;9.99e-13;39!CL:0000576;8.68e-12;48!CL:0000766;1.34e-10;69!CL:0000763;3.00e-09;100!CL:0002087;1.09e-07;104!CL:0000738;1.37e-07;136!CL:0000988;4.13e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.75e-40,168;CL:0002032,1.38e-38,161;CL:0000837,1.38e-38,161;CL:0000988,4.66e-36,177;CL:0000763,5.45e-33,108;CL:0000049,5.45e-33,108;CL:0000738,1.07e-32,136;CL:0002031,4.61e-26,120;CL:0000766,2.61e-24,72;CL:0002087,1.02e-23,115;CL:0000557,2.67e-21,67;CL:0000839,3.52e-20,66;CL:0002009,1.06e-18,61;CL:0000860,1.32e-18,42;CL:0002057,1.32e-18,42;CL:0002194,1.35e-17,59;CL:0000576,1.35e-17,59;CL:0000040,1.35e-17,59;CL:0000559,1.35e-17,59;CL:0000473,1.64e-16,48;CL:0000234,1.64e-16,48 | |||
|ontology_enrichment_development_v019=CL:0002057;5.16e-14;42!CL:0000049;7.16e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!2.13e-08!51;DOID:0060083!2.13e-08!51;DOID:1240!5.17e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.13e-08,51;DOID:0060083,2.13e-08,51;DOID:1240,5.17e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.55e-24!102;UBERON:0003061!5.55e-24!102;UBERON:0002193!1.04e-19!112;UBERON:0002371!2.35e-17!80;UBERON:0001474!2.60e-17!86;UBERON:0002405!3.90e-12!115;UBERON:0004765!1.79e-11!101;UBERON:0001434!1.79e-11!101;UBERON:0001737!1.63e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.63e-07;9!UBERON:0001557;1.63e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.67e-24,98;UBERON:0003061,8.67e-24,98;UBERON:0002193,1.97e-19,108;UBERON:0002371,3.61e-17,76;UBERON:0001474,4.27e-17,82;UBERON:0002405,1.09e-14,93;UBERON:0004765,7.63e-12,90;UBERON:0001434,6.89e-10,100;UBERON:0001737,1.63e-07,9 | |||
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|short_description=p1@NUP98 | |||
}} | }} |
Latest revision as of 22:09, 17 September 2015
Short description: | p1@NUP98 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUP98_5end |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | 0bp_to_ENST00000397004, ENST00000397007, ENST00000532475_5end |
EntrezGene: | NUP98 |
HGNC: | 8068 |
UniProt: | E9PNN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.75e-40 | 168 |
hematopoietic oligopotent progenitor cell | 1.38e-38 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-38 | 161 |
hematopoietic cell | 4.66e-36 | 177 |
myeloid cell | 5.45e-33 | 108 |
common myeloid progenitor | 5.45e-33 | 108 |
leukocyte | 1.07e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 4.61e-26 | 120 |
myeloid leukocyte | 2.61e-24 | 72 |
nongranular leukocyte | 1.02e-23 | 115 |
granulocyte monocyte progenitor cell | 2.67e-21 | 67 |
myeloid lineage restricted progenitor cell | 3.52e-20 | 66 |
macrophage dendritic cell progenitor | 1.06e-18 | 61 |
classical monocyte | 1.32e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-18 | 42 |
monopoietic cell | 1.35e-17 | 59 |
monocyte | 1.35e-17 | 59 |
monoblast | 1.35e-17 | 59 |
promonocyte | 1.35e-17 | 59 |
defensive cell | 1.64e-16 | 48 |
phagocyte | 1.64e-16 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.67e-24 | 98 |
blood island | 8.67e-24 | 98 |
hemolymphoid system | 1.97e-19 | 108 |
bone marrow | 3.61e-17 | 76 |
bone element | 4.27e-17 | 82 |
immune system | 1.09e-14 | 93 |
skeletal element | 7.63e-12 | 90 |
skeletal system | 6.89e-10 | 100 |
larynx | 1.63e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.13e-08 | 51 |
immune system cancer | 2.13e-08 | 51 |
leukemia | 5.17e-07 | 39 |