FFCP PHASE1:Hg19::chr1:159174731..159174745,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2532 | |EntrezGene=2532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4035 | |HGNC=4035 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JY94 | |UniProt=Q5JY94 | ||
|association_with_transcript=22bp_to_ENST00000435307_5end | |association_with_transcript=22bp_to_ENST00000435307_5end | ||
|cluster_id=chr1:159174731..159174745,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_7_at_DARC_5end | |description=CAGE_peak_7_at_DARC_5end | ||
|id=chr1:159174731..159174745,+ | |id=chr1:159174731..159174745,+ | ||
|ontology_enrichment_celltype=CL:0000764;1.11e-34;2!CL:0000558;1.11e-34;2 | |ontology_enrichment_celltype=CL:0000764!2.19e-10!2;CL:0000765!2.19e-10!2;CL:0000050!2.19e-10!2;CL:0000038!2.19e-10!2;CL:0000558!2.19e-10!2;CL:0000547!2.19e-10!2;CL:0000549!2.19e-10!2;CL:0000550!2.19e-10!2;CL:0000552!2.19e-10!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;1.11e-34;2!CL:0000558;1.11e-34;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.11e-34,2;CL:0000765,1.11e-34,2;CL:0000050,1.11e-34,2;CL:0000038,1.11e-34,2;CL:0000558,1.11e-34,2;CL:0000547,1.11e-34,2;CL:0000549,1.11e-34,2;CL:0000550,1.11e-34,2;CL:0000552,1.11e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.93e-27;15!UBERON:0000179;1.93e-27;15!UBERON:0000463;1.93e-27;15!UBERON:0002390;5.53e-19;32!UBERON:0002134;9.48e-18;1!UBERON:0005208;9.48e-18;1!UBERON:0004145;9.48e-18;1!UBERON:0005946;9.48e-18;1!UBERON:0005965;9.48e-18;1!UBERON:0002078;9.48e-18;1!UBERON:0002193;2.02e-11;42!UBERON:0002081;1.51e-09;2!UBERON:0002133;1.51e-09;2!UBERON:0002106;8.86e-07;3!UBERON:0003978;8.86e-07;3!UBERON:0004151;8.86e-07;3!UBERON:0000946;8.86e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-28!115;UBERON:0000178!5.44e-18!15;UBERON:0000179!5.44e-18!15;UBERON:0000463!5.44e-18!15;UBERON:0004177!9.79e-10!7;UBERON:0003127!3.38e-09!2;UBERON:0002106!6.52e-07!3;UBERON:0004854!6.52e-07!3;UBERON:0009034!6.52e-07!3;UBERON:0002095!6.52e-07!3;UBERON:0004782!6.52e-07!3;UBERON:0003281!6.52e-07!3;UBERON:0009664!6.52e-07!3;UBERON:0002296!6.52e-07!3;UBERON:0005602!6.52e-07!3;UBERON:0001179!6.52e-07!3;UBERON:0006293!6.52e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.93e-27;15!UBERON:0000179;1.93e-27;15!UBERON:0000463;1.93e-27;15!UBERON:0002390;5.53e-19;32!UBERON:0002134;9.48e-18;1!UBERON:0005208;9.48e-18;1!UBERON:0004145;9.48e-18;1!UBERON:0005946;9.48e-18;1!UBERON:0005965;9.48e-18;1!UBERON:0002078;9.48e-18;1!UBERON:0002193;2.02e-11;42!UBERON:0002081;1.51e-09;2!UBERON:0002133;1.51e-09;2!UBERON:0002106;8.86e-07;3!UBERON:0003978;8.86e-07;3!UBERON:0004151;8.86e-07;3!UBERON:0000946;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.04e-27,15;UBERON:0000179,2.04e-27,15;UBERON:0000463,2.04e-27,15;UBERON:0002134,6.23e-18,1;UBERON:0005208,6.23e-18,1;UBERON:0005946,6.23e-18,1;UBERON:0005965,6.23e-18,1;UBERON:0002078,6.23e-18,1;UBERON:0002081,1.22e-09,2;UBERON:0002133,1.22e-09,2;UBERON:0010227,1.22e-09,2;UBERON:0007023,9.54e-09,114;UBERON:0003978,7.70e-07,3;UBERON:0009751,7.70e-07,3;UBERON:0004151,7.70e-07,3;UBERON:0000946,7.70e-07,3;UBERON:0002523,7.70e-07,3;UBERON:0005983,7.70e-07,3;UBERON:0004145,7.70e-07,3;UBERON:0002165,7.70e-07,3;UBERON:0002062,7.70e-07,3;UBERON:0007280,7.70e-07,3;UBERON:0002106,8.15e-07,3;UBERON:0004854,8.15e-07,3;UBERON:0009034,8.15e-07,3;UBERON:0002095,8.15e-07,3;UBERON:0004782,8.15e-07,3;UBERON:0003281,8.15e-07,3;UBERON:0009664,8.15e-07,3;UBERON:0002296,8.15e-07,3;UBERON:0005602,8.15e-07,3;UBERON:0001179,8.15e-07,3;UBERON:0006293,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.2415469244691,31.3722541229881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.952927101831156,0.822724546172388,1.29694662238543,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,3.97520666736664,0,0,0,0,0,0.471612915298998,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,1.35361564744512,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.2415469244691,31.3722541229881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.952927101831156,0.822724546172388,1.29694662238543,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,3.97520666736664,0,0,0,0,0,0.471612915298998,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,1.35361564744512,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p7@DARC | |short_description=p7@DARC | ||
}} | }} |
Latest revision as of 22:30, 17 September 2015
Short description: | p7@DARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DARC_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 22bp_to_ENST00000435307_5end |
EntrezGene: | DARC |
HGNC: | 4035 |
UniProt: | Q5JY94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.11e-34 | 2 |
erythroblast | 1.11e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 1.11e-34 | 2 |
erythroid progenitor cell | 1.11e-34 | 2 |
reticulocyte | 1.11e-34 | 2 |
proerythroblast | 1.11e-34 | 2 |
basophilic erythroblast | 1.11e-34 | 2 |
polychromatophilic erythroblast | 1.11e-34 | 2 |
orthochromatic erythroblast | 1.11e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.04e-27 | 15 |
haemolymphatic fluid | 2.04e-27 | 15 |
organism substance | 2.04e-27 | 15 |
tricuspid valve | 6.23e-18 | 1 |
right atrium valve | 6.23e-18 | 1 |
outflow tract of atrium | 6.23e-18 | 1 |
outflow part of right atrium | 6.23e-18 | 1 |
right cardiac atrium | 6.23e-18 | 1 |
cardiac atrium | 1.22e-09 | 2 |
atrioventricular valve | 1.22e-09 | 2 |
future cardiac atrium | 1.22e-09 | 2 |
adult organism | 9.54e-09 | 114 |
valve | 7.70e-07 | 3 |
cardiac mesenchyme | 7.70e-07 | 3 |
cardiac chamber | 7.70e-07 | 3 |
cardial valve | 7.70e-07 | 3 |
tunica intima | 7.70e-07 | 3 |
heart layer | 7.70e-07 | 3 |
outflow tract | 7.70e-07 | 3 |
endocardium | 7.70e-07 | 3 |
endocardial cushion | 7.70e-07 | 3 |
presumptive endocardium | 7.70e-07 | 3 |
spleen | 8.15e-07 | 3 |
gastrointestinal system mesentery | 8.15e-07 | 3 |
stomach region | 8.15e-07 | 3 |
mesentery | 8.15e-07 | 3 |
gastrointestinal system serosa | 8.15e-07 | 3 |
mesentery of stomach | 8.15e-07 | 3 |
gut mesentery | 8.15e-07 | 3 |
dorsal mesentery | 8.15e-07 | 3 |
dorsal mesogastrium | 8.15e-07 | 3 |
peritoneal cavity | 8.15e-07 | 3 |
spleen primordium | 8.15e-07 | 3 |