FFCP PHASE1:Hg19::chr8:30244723..30244749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11030 | |EntrezGene=11030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |HGNC=19097 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFP4 | |UniProt=E5RFP4 | ||
|association_with_transcript=0bp_to_ENST00000519647_5end | |association_with_transcript=0bp_to_ENST00000519647_5end | ||
|cluster_id=chr8:30244723..30244749,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_18_at_RBPMS_5end | |description=CAGE_peak_18_at_RBPMS_5end | ||
|id=chr8:30244723..30244749,+ | |id=chr8:30244723..30244749,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.00e-20!5;CL:0000039!7.77e-19!7;CL:0000586!7.77e-19!7 | |ontology_enrichment_celltype=CL:0002322!7.00e-20!5;CL:0000039!7.77e-19!7;CL:0000586!7.77e-19!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.11e-27;5!CL:0002321;8.46e-10;15!CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.11e-27,5;CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!UBERON:0003056;2.59e-12;3!UBERON:0007123;6.55e-08;5!CL:0000031;8.48e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!1.19e-09!22;DOID:2994!1.19e-09!22 | |ontology_enrichment_disease=DOID:3095!1.19e-09!22;DOID:2994!1.19e-09!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!4.84e-12!11;UBERON:0003101!1.51e-09!22;UBERON:0000079!1.51e-09!22;UBERON:0007023!7.58e-09!115;UBERON:0005162!2.51e-08!2;UBERON:0000122!2.51e-08!2;UBERON:0000473!7.59e-08!8;UBERON:0000991!8.59e-08!21;UBERON:0009196!8.59e-08!21;UBERON:0009117!8.59e-08!21;UBERON:0005564!8.59e-08!21;UBERON:0002323!1.66e-07!46;UBERON:0004176!2.16e-07!22;UBERON:0004458!6.47e-07!49 | |ontology_enrichment_uberon=UBERON:0003135!4.84e-12!11;UBERON:0003101!1.51e-09!22;UBERON:0000079!1.51e-09!22;UBERON:0007023!7.58e-09!115;UBERON:0005162!2.51e-08!2;UBERON:0000122!2.51e-08!2;UBERON:0000473!7.59e-08!8;UBERON:0000991!8.59e-08!21;UBERON:0009196!8.59e-08!21;UBERON:0009117!8.59e-08!21;UBERON:0005564!8.59e-08!21;UBERON:0002323!1.66e-07!46;UBERON:0004176!2.16e-07!22;UBERON:0004458!6.47e-07!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0002046;6.55e-08;5!UBERON:0000922;9.96e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.61e-34,1;UBERON:0001785,3.61e-34,1;UBERON:0002464,3.61e-34,1;UBERON:0004904,3.61e-34,1;UBERON:0001021,3.61e-34,1;UBERON:0003902,3.61e-34,1;UBERON:0005425,3.61e-34,1;UBERON:0003714,7.67e-18,2;UBERON:0005162,7.67e-18,2;UBERON:0000122,7.67e-18,2;UBERON:0001781,1.32e-09,4;UBERON:0002046,6.55e-08,5;UBERON:0004117,6.55e-08,5;UBERON:0007689,6.55e-08,5;UBERON:0007123,6.55e-08,5;UBERON:0003091,6.55e-08,5;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
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| ||
|short_description=p18@RBPMS | |short_description=p18@RBPMS | ||
}} | }} |
Latest revision as of 23:24, 17 September 2015
Short description: | p18@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RBPMS_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 0bp_to_ENST00000519647_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | E5RFP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.11e-27 | 5 |
neuron | 8.97e-07 | 6 |
neuroblast | 8.97e-07 | 6 |
electrically signaling cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.61e-34 | 1 |
cranial nerve | 3.61e-34 | 1 |
nerve trunk | 3.61e-34 | 1 |
nerve connecting eye with brain | 3.61e-34 | 1 |
nerve | 3.61e-34 | 1 |
retinal neural layer | 3.61e-34 | 1 |
presumptive neural retina | 3.61e-34 | 1 |
neural tissue | 7.67e-18 | 2 |
multi cell component structure | 7.67e-18 | 2 |
neuron projection bundle | 7.67e-18 | 2 |
layer of retina | 1.32e-09 | 4 |
thyroid gland | 6.55e-08 | 5 |
pharyngeal pouch | 6.55e-08 | 5 |
thyroid diverticulum | 6.55e-08 | 5 |
pharyngeal pouch 2 | 6.55e-08 | 5 |
thyroid primordium | 6.55e-08 | 5 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |