FFCP PHASE1:Hg19::chr2:64681279..64681316,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25012 | |||
|TSSclassifier=strong | |||
|UniProt=Q3ZCW2 | |||
|association_with_transcript=-10bp_to_NM_014181,uc002scy.3_5end | |||
|cluster_id=chr2:64681279..64681316,+ | |||
|description=CAGE_peak_2_at_LGALSL_5end | |||
|id=chr2:64681279..64681316,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.75e-18!254;CL:0000223!2.31e-08!59;CL:0002076!3.00e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.08e-18,253;CL:0000223,1.01e-09,58;CL:0002076,2.34e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.74e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.17e-16!115;UBERON:0000481!1.76e-14!347;UBERON:0000468!1.79e-14!659;UBERON:0000922!4.30e-14!612;UBERON:0000480!5.35e-12!626;UBERON:0000467!9.76e-12!625;UBERON:0004119!1.19e-11!169;UBERON:0000925!1.19e-11!169;UBERON:0006595!1.19e-11!169;UBERON:0002050!1.43e-11!605;UBERON:0005423!1.43e-11!605;UBERON:0000466!1.59e-11!126;UBERON:0001007!2.09e-11!155;UBERON:0001555!2.09e-11!155;UBERON:0007026!2.09e-11!155;UBERON:0000923!3.22e-11!604;UBERON:0005291!3.22e-11!604;UBERON:0006598!3.22e-11!604;UBERON:0002532!3.22e-11!604;UBERON:0000064!2.26e-10!219;UBERON:0005177!6.87e-10!107;UBERON:0000062!8.94e-10!511;UBERON:0004921!1.14e-09!129;UBERON:0004185!1.14e-09!129;UBERON:0000464!1.47e-09!104;UBERON:0002417!3.72e-09!61;UBERON:0000916!3.72e-09!61;UBERON:0009569!4.03e-09!113;UBERON:0003103!8.76e-09!69;UBERON:0005172!1.30e-08!55;UBERON:0005173!1.30e-08!55;UBERON:0003104!2.09e-08!238;UBERON:0009142!2.09e-08!238;UBERON:0000477!2.42e-08!286;UBERON:0000077!3.66e-08!130;UBERON:0001048!4.10e-08!168;UBERON:0004111!4.26e-08!241;UBERON:0002553!8.25e-08!70;UBERON:0000483!3.57e-07!309;UBERON:0000119!5.41e-07!312;UBERON:0000475!5.87e-07!365;UBERON:0002365!7.04e-07!31;UBERON:0002330!7.04e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.68e-08;33!UBERON:0002365;2.14e-07;31!UBERON:0002330;2.14e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.10e-16,114;UBERON:0001007,1.89e-12,145;UBERON:0001555,1.89e-12,145;UBERON:0007026,1.89e-12,145;UBERON:0004119,2.17e-12,160;UBERON:0000925,2.17e-12,160;UBERON:0006595,2.17e-12,160;UBERON:0000922,2.26e-11,592;UBERON:0004921,3.89e-11,118;UBERON:0005177,2.28e-10,101;UBERON:0002417,9.88e-10,60;UBERON:0000916,9.88e-10,60;UBERON:0005423,1.13e-09,581;UBERON:0009569,2.24e-09,112;UBERON:0005172,3.62e-09,54;UBERON:0005173,3.62e-09,54;UBERON:0011216,1.50e-08,223;UBERON:0003103,1.60e-08,68;UBERON:0001048,2.00e-08,160;UBERON:0001041,6.68e-08,87;UBERON:0002365,1.95e-07,31;UBERON:0002330,1.95e-07,31;UBERON:0000033,2.27e-07,56;UBERON:0001444,4.79e-07,49;UBERON:0002050,4.87e-07,564;UBERON:0004111,6.73e-07,240;UBERON:0005409,7.88e-07,25 | |||
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| |||
|short_description=p2@LGALSL | |||
}} |
Latest revision as of 23:37, 17 September 2015
Short description: | p2@LGALSL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LGALSL_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_NM_014181, uc002scy.3_5end |
EntrezGene: | LGALSL |
HGNC: | 25012 |
UniProt: | Q3ZCW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.08e-18 | 253 |
endodermal cell | 1.01e-09 | 58 |
endo-epithelial cell | 2.34e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.10e-16 | 114 |
digestive system | 1.89e-12 | 145 |
digestive tract | 1.89e-12 | 145 |
primitive gut | 1.89e-12 | 145 |
endoderm-derived structure | 2.17e-12 | 160 |
endoderm | 2.17e-12 | 160 |
presumptive endoderm | 2.17e-12 | 160 |
embryo | 2.26e-11 | 592 |
subdivision of digestive tract | 3.89e-11 | 118 |
trunk region element | 2.28e-10 | 101 |
abdominal segment of trunk | 9.88e-10 | 60 |
abdomen | 9.88e-10 | 60 |
developing anatomical structure | 1.13e-09 | 581 |
subdivision of trunk | 2.24e-09 | 112 |
abdomen element | 3.62e-09 | 54 |
abdominal segment element | 3.62e-09 | 54 |
organ system subdivision | 1.50e-08 | 223 |
compound organ | 1.60e-08 | 68 |
primordium | 2.00e-08 | 160 |
foregut | 6.68e-08 | 87 |
exocrine gland | 1.95e-07 | 31 |
exocrine system | 1.95e-07 | 31 |
head | 2.27e-07 | 56 |
subdivision of head | 4.79e-07 | 49 |
embryonic structure | 4.87e-07 | 564 |
anatomical conduit | 6.73e-07 | 240 |
gastrointestinal system | 7.88e-07 | 25 |